RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 A0A1W2PNM2 257 aa4.3□□□□□ -1.72
CCDC171-204ENST00000470191 SPINK7P58062 85 aa4.3□□□□□ -1.72
CCDC171-204ENST00000470191 FABP2P12104 132 aa4.28□□□□□ -1.72
CCDC171-204ENST00000470191 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
CCDC171-204ENST00000470191 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
CCDC171-204ENST00000470191 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
CCDC171-204ENST00000470191 A6NN06 94 aa4.26□□□□□ -1.73
CCDC171-204ENST00000470191 SNCGO76070 127 aa4.26□□□□□ -1.73
CCDC171-204ENST00000470191 FAM218AQ96MZ4 157 aa4.26□□□□□ -1.73
CCDC171-204ENST00000470191 HIST1H4GQ99525 98 aa4.24□□□□□ -1.73
CCDC171-204ENST00000470191 ANKRD29Q8N6D5 301 aa4.23□□□□□ -1.73
CCDC171-204ENST00000470191 LINC00472Q9H8W2 130 aa4.23□□□□□ -1.73
CCDC171-204ENST00000470191 A0A1B0GVX0 72 aa4.22□□□□□ -1.73
CCDC171-204ENST00000470191 LYRM7Q5U5X0 104 aa4.22□□□□□ -1.73
CCDC171-204ENST00000470191 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
CCDC171-204ENST00000470191 TRBV7-4A0A0J9YYF1 115 aa4.21□□□□□ -1.74
CCDC171-204ENST00000470191 C8orf87E5RJ46 101 aa4.21□□□□□ -1.74
CCDC171-204ENST00000470191 H0YGX0 51 aa4.21□□□□□ -1.74
CCDC171-204ENST00000470191 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
CCDC171-204ENST00000470191 RAB37Q96AX2 223 aa4.21□□□□□ -1.74
CCDC171-204ENST00000470191 TRACP01848 142 aa4.2□□□□□ -1.74
CCDC171-204ENST00000470191 HSBP1L1C9JCN9 74 aa4.19□□□□□ -1.74
CCDC171-204ENST00000470191 CCKP06307 115 aa4.19□□□□□ -1.74
CCDC171-204ENST00000470191 SNRPEP62304 92 aaKnown RBP4.19□□□□□ -1.74
CCDC171-204ENST00000470191 VPS25Q9BRG1 176 aa4.19□□□□□ -1.74
CCDC171-204ENST00000470191 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
CCDC171-204ENST00000470191 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
CCDC171-204ENST00000470191 COA6Q5JTJ3 125 aaKnown RBP4.17□□□□□ -1.74
CCDC171-204ENST00000470191 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
CCDC171-204ENST00000470191 MT1BP07438 61 aa4.16□□□□□ -1.74
CCDC171-204ENST00000470191 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
CCDC171-204ENST00000470191 FAM236AA0A1B0GUQ0 79 aa4.15□□□□□ -1.75
CCDC171-204ENST00000470191 FAM236BA0A1B0GV22 79 aa4.15□□□□□ -1.75
CCDC171-204ENST00000470191 Q5VV11 94 aa4.15□□□□□ -1.75
CCDC171-204ENST00000470191 A0A1B0GX51 115 aa4.13□□□□□ -1.75
CCDC171-204ENST00000470191 ORMDL1Q9P0S3 153 aa4.13□□□□□ -1.75
CCDC171-204ENST00000470191 A0A0B4J2C4 111 aa4.12□□□□□ -1.75
CCDC171-204ENST00000470191 IGKV3D-7A0A0C4DH55 119 aa4.12□□□□□ -1.75
CCDC171-204ENST00000470191 DNAL4O96015 105 aa4.12□□□□□ -1.75
CCDC171-204ENST00000470191 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
CCDC171-204ENST00000470191 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
CCDC171-204ENST00000470191 NDUFB1O75438 58 aa4.11□□□□□ -1.75
CCDC171-204ENST00000470191 DSCR8Q96T75 97 aa4.11□□□□□ -1.75
CCDC171-204ENST00000470191 C8orf17Q9NRJ1 99 aa4.11□□□□□ -1.75
CCDC171-204ENST00000470191 KMT2DO14686 5537 aa4.09□□□□□ -1.75
CCDC171-204ENST00000470191 J3KT08 172 aa4.09□□□□□ -1.75
CCDC171-204ENST00000470191 COX8AP10176 69 aa4.09□□□□□ -1.75
CCDC171-204ENST00000470191 S100A2P29034 98 aa4.09□□□□□ -1.75
CCDC171-204ENST00000470191 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
CCDC171-204ENST00000470191 C5orf47Q569G3 176 aa4.09□□□□□ -1.75
CCDC171-204ENST00000470191 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
CCDC171-204ENST00000470191 PRO1854Q9UHT4 67 aa4.09□□□□□ -1.75
CCDC171-204ENST00000470191 TMEM256-PLSCR3K7ERE1 68 aa4.08□□□□□ -1.76
CCDC171-204ENST00000470191 C14orf144Q96I85 54 aa4.08□□□□□ -1.76
CCDC171-204ENST00000470191 HIST1H2BLQ99880 126 aa4.08□□□□□ -1.76
CCDC171-204ENST00000470191 IMUPQ9GZP8 106 aa4.08□□□□□ -1.76
CCDC171-204ENST00000470191 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 IGKV2-30P06310 120 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 SPRR2EP22531 72 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 SPRR2BP35325 72 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 SPRR2AP35326 72 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 PSMB2P49721 201 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 Q6ZVQ6 151 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 HIST3H2BBQ8N257 126 aa4.07□□□□□ -1.76
CCDC171-204ENST00000470191 H3BQ85 93 aa4.05□□□□□ -1.76
CCDC171-204ENST00000470191 NDUFS5O43920 106 aa4.05□□□□□ -1.76
CCDC171-204ENST00000470191 RBM3P98179 157 aaKnown RBP4.05□□□□□ -1.76
CCDC171-204ENST00000470191 CEND1Q8N111 149 aa4.05□□□□□ -1.76
CCDC171-204ENST00000470191 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
CCDC171-204ENST00000470191 DLEU1O43261 78 aa4.04□□□□□ -1.76
CCDC171-204ENST00000470191 FXYD2P54710 66 aa4.03□□□□□ -1.76
CCDC171-204ENST00000470191 UBE2V1Q13404 147 aa4.03□□□□□ -1.76
CCDC171-204ENST00000470191 Q6ZQT0 140 aa4.03□□□□□ -1.76
CCDC171-204ENST00000470191 C2orf91Q6ZV80 131 aa4.03□□□□□ -1.76
CCDC171-204ENST00000470191 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
CCDC171-204ENST00000470191 HIGD1BQ9P298 99 aa4.03□□□□□ -1.76
CCDC171-204ENST00000470191 C4orf26Q17RF5 130 aa4.02□□□□□ -1.77
CCDC171-204ENST00000470191 C9JAW5 83 aa4.01□□□□□ -1.77
CCDC171-204ENST00000470191 K7ERJ3 54 aa4.01□□□□□ -1.77
CCDC171-204ENST00000470191 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
CCDC171-204ENST00000470191 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
CCDC171-204ENST00000470191 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
CCDC171-204ENST00000470191 PAM16Q9Y3D7 125 aa4.01□□□□□ -1.77
CCDC171-204ENST00000470191 SPATA45Q537H7 98 aa4□□□□□ -1.77
CCDC171-204ENST00000470191 C7orf65Q6ZTY9 151 aa4□□□□□ -1.77
CCDC171-204ENST00000470191 MMP24-AS1A0A0U1RRL7 71 aa3.99□□□□□ -1.77
CCDC171-204ENST00000470191 COX6CP09669 75 aa3.99□□□□□ -1.77
CCDC171-204ENST00000470191 TMEM254Q8TBM7 123 aa3.99□□□□□ -1.77
CCDC171-204ENST00000470191 PRR15Q8IV56 129 aa3.98□□□□□ -1.77
CCDC171-204ENST00000470191 Q5W150 140 aa3.97□□□□□ -1.77
CCDC171-204ENST00000470191 S4R3F8 94 aa3.97□□□□□ -1.77
CCDC171-204ENST00000470191 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
CCDC171-204ENST00000470191 S100A6P06703 90 aa3.96□□□□□ -1.78
CCDC171-204ENST00000470191 BAALC-AS2P0C853 105 aa3.96□□□□□ -1.78
CCDC171-204ENST00000470191 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
CCDC171-204ENST00000470191 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
CCDC171-204ENST00000470191 SCGB1C2P0DMR2 95 aa3.95□□□□□ -1.78
CCDC171-204ENST00000470191 VAMP8Q9BV40 100 aa3.95□□□□□ -1.78
CCDC171-204ENST00000470191 SPRR2DP22532 72 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms