RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 COX6B1P14854 86 aa1.51□□□□□ -2.17
COL11A1-208ENST00000470170 CNFNQ9BYD5 112 aa1.51□□□□□ -2.17
COL11A1-208ENST00000470170 SONP18583 2426 aaKnown RBP1.51□□□□□ -2.17
COL11A1-208ENST00000470170 CSMD1Q96PZ7 3565 aa1.51□□□□□ -2.17
COL11A1-208ENST00000470170 CHD7Q9P2D1 2997 aa1.51□□□□□ -2.17
COL11A1-208ENST00000470170 ASCC3Q8N3C0 2202 aaKnown RBP1.51□□□□□ -2.17
COL11A1-208ENST00000470170 LAMA5O15230 3695 aa1.51□□□□□ -2.17
COL11A1-208ENST00000470170 ADGRG4Q8IZF6 3080 aa1.51□□□□□ -2.17
COL11A1-208ENST00000470170 CRYBG3Q68DQ2 2970 aa1.5□□□□□ -2.17
COL11A1-208ENST00000470170 CCL22O00626 93 aa1.5□□□□□ -2.17
COL11A1-208ENST00000470170 LYNX1P0DP58 116 aa1.5□□□□□ -2.17
COL11A1-208ENST00000470170 PDZD2O15018 2839 aa1.5□□□□□ -2.17
COL11A1-208ENST00000470170 CENPEQ02224 2701 aa1.5□□□□□ -2.17
COL11A1-208ENST00000470170 K7EQZ3 153 aa1.49□□□□□ -2.17
COL11A1-208ENST00000470170 CRIP1P50238 77 aa1.49□□□□□ -2.17
COL11A1-208ENST00000470170 SPINK9Q5DT21 86 aa1.49□□□□□ -2.17
COL11A1-208ENST00000470170 MRPL34Q9BQ48 92 aaKnown RBP1.49□□□□□ -2.17
COL11A1-208ENST00000470170 AKAP13Q12802 2813 aa1.48□□□□□ -2.17
COL11A1-208ENST00000470170 TGP01266 2768 aa1.48□□□□□ -2.17
COL11A1-208ENST00000470170 I3L2K1 104 aa1.48□□□□□ -2.17
COL11A1-208ENST00000470170 CDKN2A-AS1Q9UH64 79 aa1.48□□□□□ -2.17
COL11A1-208ENST00000470170 CELSR2Q9HCU4 2923 aa1.48□□□□□ -2.17
COL11A1-208ENST00000470170 ACANP16112 2415 aa1.48□□□□□ -2.17
COL11A1-208ENST00000470170 UBR4Q5T4S7 5183 aa1.47□□□□□ -2.17
COL11A1-208ENST00000470170 TIMM8BQ9Y5J9 83 aaPredicted RBP1.47□□□□□ -2.17
COL11A1-208ENST00000470170 CSMD2Q7Z408 3487 aa1.47□□□□□ -2.17
COL11A1-208ENST00000470170 TNCP24821 2201 aa1.47□□□□□ -2.17
COL11A1-208ENST00000470170 CELSR1Q9NYQ6 3014 aa1.47□□□□□ -2.17
COL11A1-208ENST00000470170 SPENQ96T58 3664 aaKnown RBP1.46□□□□□ -2.18
COL11A1-208ENST00000470170 APCP25054 2843 aa1.46□□□□□ -2.18
COL11A1-208ENST00000470170 LINC00158P58513 81 aa1.46□□□□□ -2.18
COL11A1-208ENST00000470170 TMEM167BQ9NRX6 74 aa1.46□□□□□ -2.18
COL11A1-208ENST00000470170 CADP27708 2225 aa1.46□□□□□ -2.18
COL11A1-208ENST00000470170 NDUFA3O95167 84 aa1.45□□□□□ -2.18
COL11A1-208ENST00000470170 COX6A2Q02221 97 aa1.45□□□□□ -2.18
COL11A1-208ENST00000470170 Q8IZM0 81 aa1.45□□□□□ -2.18
COL11A1-208ENST00000470170 NSD1Q96L73 2696 aaPredicted RBP1.44□□□□□ -2.18
COL11A1-208ENST00000470170 SPINK4O60575 86 aa1.44□□□□□ -2.18
COL11A1-208ENST00000470170 PRO0255Q9UI72 69 aa1.44□□□□□ -2.18
COL11A1-208ENST00000470170 LYNX1G3V0Z9 82 aa1.43□□□□□ -2.18
COL11A1-208ENST00000470170 PCLOQ9Y6V0 5065 aa1.43□□□□□ -2.18
COL11A1-208ENST00000470170 BIRC6Q9NR09 4857 aa1.43□□□□□ -2.18
COL11A1-208ENST00000470170 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
COL11A1-208ENST00000470170 LAMA1P25391 3075 aa1.42□□□□□ -2.18
COL11A1-208ENST00000470170 MEGF8Q7Z7M0 2845 aa1.42□□□□□ -2.18
COL11A1-208ENST00000470170 RYR3Q15413 4870 aa1.42□□□□□ -2.18
COL11A1-208ENST00000470170 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
COL11A1-208ENST00000470170 ZANQ9Y493 2812 aa1.42□□□□□ -2.18
COL11A1-208ENST00000470170 GOLGA4Q13439 2230 aaKnown RBP1.42□□□□□ -2.18
COL11A1-208ENST00000470170 DCHS2Q6V1P9 2916 aa1.41□□□□□ -2.18
COL11A1-208ENST00000470170 Q6ZSA8 131 aa1.41□□□□□ -2.18
COL11A1-208ENST00000470170 SMR3AQ99954 134 aa1.41□□□□□ -2.18
COL11A1-208ENST00000470170 FLG2Q5D862 2391 aaPredicted RBP1.41□□□□□ -2.18
COL11A1-208ENST00000470170 PRRC2CQ9Y520 2896 aaKnown RBP1.41□□□□□ -2.18
COL11A1-208ENST00000470170 ATMQ13315 3056 aa1.41□□□□□ -2.18
COL11A1-208ENST00000470170 MXRA5Q9NR99 2828 aa1.4□□□□□ -2.18
COL11A1-208ENST00000470170 SNRPGP62308 76 aaKnown RBP1.4□□□□□ -2.19
COL11A1-208ENST00000470170 LINC00308Q8TCZ7 52 aa1.4□□□□□ -2.19
COL11A1-208ENST00000470170 KNTC1P50748 2209 aa1.39□□□□□ -2.19
COL11A1-208ENST00000470170 MINOS1Q5TGZ0 78 aa1.39□□□□□ -2.19
COL11A1-208ENST00000470170 Q9Y3F1 56 aa1.39□□□□□ -2.19
COL11A1-208ENST00000470170 MGAQ8IWI9 3026 aa1.38□□□□□ -2.19
COL11A1-208ENST00000470170 BSNQ9UPA5 3926 aa1.38□□□□□ -2.19
COL11A1-208ENST00000470170 CNTRLQ7Z7A1 2325 aa1.38□□□□□ -2.19
COL11A1-208ENST00000470170 KMT2CQ8NEZ4 4911 aaKnown RBP1.37□□□□□ -2.19
COL11A1-208ENST00000470170 Q5VSD8 79 aa1.37□□□□□ -2.19
COL11A1-208ENST00000470170 APLNQ9ULZ1 77 aa1.37□□□□□ -2.19
COL11A1-208ENST00000470170 TENM2Q9NT68 2774 aa1.37□□□□□ -2.19
COL11A1-208ENST00000470170 CUBNO60494 3623 aa1.36□□□□□ -2.19
COL11A1-208ENST00000470170 SPRR1AP35321 89 aa1.36□□□□□ -2.19
COL11A1-208ENST00000470170 C6orf48Q9UBA6 75 aa1.36□□□□□ -2.19
COL11A1-208ENST00000470170 PKDREJQ9NTG1 2253 aa1.36□□□□□ -2.19
COL11A1-208ENST00000470170 SMIM2Q9BVW6 85 aa1.35□□□□□ -2.19
COL11A1-208ENST00000470170 MAP1AP78559 2803 aaPredicted RBP1.35□□□□□ -2.19
COL11A1-208ENST00000470170 SVEP1Q4LDE5 3571 aa1.34□□□□□ -2.19
COL11A1-208ENST00000470170 KNL1Q8NG31 2342 aa1.34□□□□□ -2.19
COL11A1-208ENST00000470170 HYDINQ4G0P3 5121 aa1.34□□□□□ -2.19
COL11A1-208ENST00000470170 RYR1P21817 5038 aa1.34□□□□□ -2.19
COL11A1-208ENST00000470170 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.19
COL11A1-208ENST00000470170 A0A0D9SG42 100 aa1.34□□□□□ -2.19
COL11A1-208ENST00000470170 H0YAA0 97 aa1.34□□□□□ -2.19
COL11A1-208ENST00000470170 DEFB105AQ8NG35 78 aa1.34□□□□□ -2.19
COL11A1-208ENST00000470170 KIAA1109Q2LD37 5005 aa1.34□□□□□ -2.2
COL11A1-208ENST00000470170 EPPK1P58107 5090 aaKnown RBP1.33□□□□□ -2.2
COL11A1-208ENST00000470170 STAB2Q8WWQ8 2551 aa1.33□□□□□ -2.2
COL11A1-208ENST00000470170 H1FX-AS1Q4G0G2 97 aa1.33□□□□□ -2.2
COL11A1-208ENST00000470170 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
COL11A1-208ENST00000470170 WFDC13Q8IUB5 93 aa1.33□□□□□ -2.2
COL11A1-208ENST00000470170 AKAP6Q13023 2319 aa1.32□□□□□ -2.2
COL11A1-208ENST00000470170 SPRR1BP22528 89 aa1.32□□□□□ -2.2
COL11A1-208ENST00000470170 IAPPP10997 89 aa1.31□□□□□ -2.2
COL11A1-208ENST00000470170 TACC2O95359 2948 aa1.3□□□□□ -2.2
COL11A1-208ENST00000470170 TFF3Q07654 80 aa1.3□□□□□ -2.2
COL11A1-208ENST00000470170 LELP1Q5T871 98 aa1.3□□□□□ -2.2
COL11A1-208ENST00000470170 NDUFA1O15239 70 aa1.29□□□□□ -2.2
COL11A1-208ENST00000470170 DEFB130BP0DP73 79 aa1.29□□□□□ -2.2
COL11A1-208ENST00000470170 DEFB130AP0DP74 79 aa1.29□□□□□ -2.2
COL11A1-208ENST00000470170 PRB3Q04118 309 aaPredicted RBP1.29□□□□□ -2.2
COL11A1-208ENST00000470170 RYR2Q92736 4967 aa1.29□□□□□ -2.2
COL11A1-208ENST00000470170 AKAP9Q99996 3911 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms