RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 WWC2-AS2Q96NR7 200 aa8.48□□□□□ -1.05
GPC1-208ENST00000469694 C1orf134Q5TEV5 83 aa8.48□□□□□ -1.05
GPC1-208ENST00000469694 MMP24-AS1A0A0U1RRL7 71 aa8.47□□□□□ -1.05
GPC1-208ENST00000469694 PCOTHQ58A44 107 aa8.47□□□□□ -1.05
GPC1-208ENST00000469694 RTL8CO15255 209 aa8.47□□□□□ -1.05
GPC1-208ENST00000469694 SPINK7P58062 85 aa8.45□□□□□ -1.06
GPC1-208ENST00000469694 DNAH6Q9C0G6 4158 aa8.45□□□□□ -1.06
GPC1-208ENST00000469694 H0Y9J4 135 aa8.44□□□□□ -1.06
GPC1-208ENST00000469694 DNAH17Q9UFH2 4485 aa8.43□□□□□ -1.06
GPC1-208ENST00000469694 SPACA4Q8TDM5 124 aa8.43□□□□□ -1.06
GPC1-208ENST00000469694 SPRR1BP22528 89 aa8.41□□□□□ -1.06
GPC1-208ENST00000469694 TP53AIP1Q9HCN2 124 aa8.41□□□□□ -1.06
GPC1-208ENST00000469694 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
GPC1-208ENST00000469694 FRAS1Q86XX4 4008 aa8.4□□□□□ -1.06
GPC1-208ENST00000469694 HRES1P13985 223 aa8.4□□□□□ -1.06
GPC1-208ENST00000469694 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.06
GPC1-208ENST00000469694 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
GPC1-208ENST00000469694 DNAH8Q96JB1 4490 aa8.37□□□□□ -1.07
GPC1-208ENST00000469694 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
GPC1-208ENST00000469694 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
GPC1-208ENST00000469694 C8orf87E5RJ46 101 aa8.34□□□□□ -1.07
GPC1-208ENST00000469694 FAT2Q9NYQ8 4349 aa8.33□□□□□ -1.08
GPC1-208ENST00000469694 ALMS1Q8TCU4 4167 aa8.33□□□□□ -1.08
GPC1-208ENST00000469694 Q96NJ1 140 aa8.32□□□□□ -1.08
GPC1-208ENST00000469694 LINC00313P59037 77 aa8.32□□□□□ -1.08
GPC1-208ENST00000469694 C8orf17Q9NRJ1 99 aa8.32□□□□□ -1.08
GPC1-208ENST00000469694 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
GPC1-208ENST00000469694 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
GPC1-208ENST00000469694 PKD1P98161 4303 aa8.29□□□□□ -1.08
GPC1-208ENST00000469694 SACSQ9NZJ4 4579 aa8.29□□□□□ -1.08
GPC1-208ENST00000469694 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
GPC1-208ENST00000469694 IGLV9-49A0A0B4J1Y8 123 aa8.27□□□□□ -1.09
GPC1-208ENST00000469694 PRAC1Q96KF2 57 aa8.27□□□□□ -1.09
GPC1-208ENST00000469694 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
GPC1-208ENST00000469694 PKHD1P08F94 4074 aa8.25□□□□□ -1.09
GPC1-208ENST00000469694 CIRBP-AS1Q8TBR5 109 aa8.25□□□□□ -1.09
GPC1-208ENST00000469694 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
GPC1-208ENST00000469694 KRTAP10-1P60331 282 aa8.24□□□□□ -1.09
GPC1-208ENST00000469694 IGHV6-1A0A0B4J1U7 121 aa8.24□□□□□ -1.09
GPC1-208ENST00000469694 A0A1B0GVX0 72 aa8.24□□□□□ -1.09
GPC1-208ENST00000469694 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
GPC1-208ENST00000469694 MRPL34Q9BQ48 92 aaKnown RBP8.24□□□□□ -1.09
GPC1-208ENST00000469694 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
GPC1-208ENST00000469694 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
GPC1-208ENST00000469694 KMT2CQ8NEZ4 4911 aaKnown RBP8.2□□□□□ -1.1
GPC1-208ENST00000469694 LINC01554Q52M75 96 aa8.18□□□□□ -1.1
GPC1-208ENST00000469694 A0A087X002 238 aa8.17□□□□□ -1.1
GPC1-208ENST00000469694 ZNF861PO60384 105 aa8.17□□□□□ -1.1
GPC1-208ENST00000469694 NOTCH2NLQ7Z3S9 236 aa8.17□□□□□ -1.1
GPC1-208ENST00000469694 ACYP2P14621 99 aa8.17□□□□□ -1.1
GPC1-208ENST00000469694 CDK2AP2O75956 126 aa8.16□□□□□ -1.1
GPC1-208ENST00000469694 Q5W150 140 aa8.15□□□□□ -1.11
GPC1-208ENST00000469694 IGLV7-43P04211 117 aa8.14□□□□□ -1.11
GPC1-208ENST00000469694 Q6ZSA8 131 aa8.14□□□□□ -1.11
GPC1-208ENST00000469694 KRTAP13-3Q3SY46 172 aa8.14□□□□□ -1.11
GPC1-208ENST00000469694 SPATA8Q6RVD6 105 aa8.13□□□□□ -1.11
GPC1-208ENST00000469694 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
GPC1-208ENST00000469694 RYR2Q92736 4967 aa8.1□□□□□ -1.11
GPC1-208ENST00000469694 VPS13BQ7Z7G8 4022 aa8.1□□□□□ -1.11
GPC1-208ENST00000469694 A0A1B0GU69 56 aa8.1□□□□□ -1.11
GPC1-208ENST00000469694 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
GPC1-208ENST00000469694 ZNF706Q9Y5V0 76 aaPredicted RBP8.08□□□□□ -1.12
GPC1-208ENST00000469694 DYNC1H1Q14204 4646 aaKnown RBP8.06□□□□□ -1.12
GPC1-208ENST00000469694 SPINK6Q6UWN8 80 aa8.05□□□□□ -1.12
GPC1-208ENST00000469694 MIR22HGQ0VDD5 57 aa8.04□□□□□ -1.12
GPC1-208ENST00000469694 H3BS24 57 aa8.04□□□□□ -1.12
GPC1-208ENST00000469694 UQCR11O14957 56 aa8.02□□□□□ -1.13
GPC1-208ENST00000469694 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
GPC1-208ENST00000469694 FAT1Q14517 4588 aa7.99□□□□□ -1.13
GPC1-208ENST00000469694 A0A1B0GVY2 172 aa7.98□□□□□ -1.13
GPC1-208ENST00000469694 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
GPC1-208ENST00000469694 RYR3Q15413 4870 aa7.97□□□□□ -1.13
GPC1-208ENST00000469694 KRTAP13-2Q52LG2 175 aa7.95□□□□□ -1.14
GPC1-208ENST00000469694 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
GPC1-208ENST00000469694 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
GPC1-208ENST00000469694 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
GPC1-208ENST00000469694 FAM229AH3BQW9 127 aa7.91□□□□□ -1.14
GPC1-208ENST00000469694 IGKV2-30P06310 120 aa7.91□□□□□ -1.14
GPC1-208ENST00000469694 SSBP3-AS1Q7Z2R9 100 aa7.86□□□□□ -1.15
GPC1-208ENST00000469694 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
GPC1-208ENST00000469694 TYMSOSQ8TAI1 123 aa7.8□□□□□ -1.16
GPC1-208ENST00000469694 IGKV2D-30A0A075B6S6 120 aa7.75□□□□□ -1.17
GPC1-208ENST00000469694 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
GPC1-208ENST00000469694 HSPG2P98160 4391 aa7.73□□□□□ -1.17
GPC1-208ENST00000469694 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
GPC1-208ENST00000469694 A8MUU9 505 aa7.71□□□□□ -1.18
GPC1-208ENST00000469694 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
GPC1-208ENST00000469694 LRP1Q07954 4544 aaKnown RBP7.7□□□□□ -1.18
GPC1-208ENST00000469694 EPPK1P58107 5090 aaKnown RBP7.7□□□□□ -1.18
GPC1-208ENST00000469694 SPINK1P00995 79 aa7.69□□□□□ -1.18
GPC1-208ENST00000469694 LINC00304Q8N9R0 145 aa7.68□□□□□ -1.18
GPC1-208ENST00000469694 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
GPC1-208ENST00000469694 ROMO1P60602 79 aa7.67□□□□□ -1.18
GPC1-208ENST00000469694 H0YAA0 97 aa7.66□□□□□ -1.18
GPC1-208ENST00000469694 RYR1P21817 5038 aa7.66□□□□□ -1.18
GPC1-208ENST00000469694 PKHD1L1Q86WI1 4243 aa7.66□□□□□ -1.18
GPC1-208ENST00000469694 FLG2Q5D862 2391 aaPredicted RBP7.65□□□□□ -1.18
GPC1-208ENST00000469694 Q5VSD8 79 aa7.63□□□□□ -1.19
GPC1-208ENST00000469694 Q8N1X5 172 aa7.61□□□□□ -1.19
GPC1-208ENST00000469694 MYCBP2O75592 4640 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms