RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 RIF1Q5UIP0 2472 aaKnown RBP-1.22□□□□□ -2.6
XRN1-205ENST00000465507 RICTORQ6R327 1708 aa-1.22□□□□□ -2.6
XRN1-205ENST00000465507 MRPL33O75394 65 aaKnown RBP-1.22□□□□□ -2.6
XRN1-205ENST00000465507 KRTAP19-5Q3LI72 72 aa-1.22□□□□□ -2.6
XRN1-205ENST00000465507 SPTBN5Q9NRC6 3674 aaKnown RBP-1.22□□□□□ -2.61
XRN1-205ENST00000465507 LAMA2P24043 3122 aaKnown RBP-1.23□□□□□ -2.61
XRN1-205ENST00000465507 KDM5DQ9BY66 1539 aa-1.23□□□□□ -2.61
XRN1-205ENST00000465507 CD163L1Q9NR16 1453 aa-1.24□□□□□ -2.61
XRN1-205ENST00000465507 ARHGAP35Q9NRY4 1499 aa-1.24□□□□□ -2.61
XRN1-205ENST00000465507 ITSN1Q15811 1721 aa-1.24□□□□□ -2.61
XRN1-205ENST00000465507 DNHD1Q96M86 4753 aa-1.24□□□□□ -2.61
XRN1-205ENST00000465507 SPENQ96T58 3664 aaKnown RBP-1.25□□□□□ -2.61
XRN1-205ENST00000465507 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.25□□□□□ -2.61
XRN1-205ENST00000465507 CFAP43Q8NDM7 1665 aa-1.25□□□□□ -2.61
XRN1-205ENST00000465507 TJP1Q07157 1748 aa-1.25□□□□□ -2.61
XRN1-205ENST00000465507 WT1-ASQ06250 92 aa-1.25□□□□□ -2.61
XRN1-205ENST00000465507 FRYQ5TBA9 3013 aa-1.25□□□□□ -2.61
XRN1-205ENST00000465507 ERVK-7P63135 1459 aa-1.25□□□□□ -2.61
XRN1-205ENST00000465507 KIAA1109Q2LD37 5005 aa-1.25□□□□□ -2.61
XRN1-205ENST00000465507 UBL5Q9BZL1 73 aa-1.26□□□□□ -2.61
XRN1-205ENST00000465507 BPTFQ12830 3046 aa-1.26□□□□□ -2.61
XRN1-205ENST00000465507 ABCC1P33527 1531 aa-1.26□□□□□ -2.61
XRN1-205ENST00000465507 ZC3H13Q5T200 1668 aaKnown RBP-1.26□□□□□ -2.61
XRN1-205ENST00000465507 RNF213Q63HN8 5207 aa-1.27□□□□□ -2.61
XRN1-205ENST00000465507 C18orf32Q8TCD1 76 aa-1.27□□□□□ -2.61
XRN1-205ENST00000465507 HFM1A2PYH4 1435 aa-1.27□□□□□ -2.61
XRN1-205ENST00000465507 DCAF1Q9Y4B6 1507 aa-1.27□□□□□ -2.61
XRN1-205ENST00000465507 THOC2Q8NI27 1593 aaKnown RBP-1.27□□□□□ -2.61
XRN1-205ENST00000465507 USP9XQ93008 2570 aaPredicted RBP-1.27□□□□□ -2.61
XRN1-205ENST00000465507 RNF17Q9BXT8 1623 aaKnown RBP-1.28□□□□□ -2.61
XRN1-205ENST00000465507 RALGAPBQ86X10 1494 aa-1.28□□□□□ -2.61
XRN1-205ENST00000465507 ENHOQ6UWT2 76 aa-1.28□□□□□ -2.61
XRN1-205ENST00000465507 TLN2Q9Y4G6 2542 aa-1.28□□□□□ -2.61
XRN1-205ENST00000465507 KIAA0586Q9BVV6 1533 aa-1.29□□□□□ -2.62
XRN1-205ENST00000465507 RPS27P42677 84 aaKnown RBP-1.29□□□□□ -2.62
XRN1-205ENST00000465507 RPS27LQ71UM5 84 aaKnown RBP-1.29□□□□□ -2.62
XRN1-205ENST00000465507 C5orf42Q9H799 3197 aa-1.3□□□□□ -2.62
XRN1-205ENST00000465507 DNAH7Q8WXX0 4024 aa-1.3□□□□□ -2.62
XRN1-205ENST00000465507 DEFB1P60022 68 aa-1.3□□□□□ -2.62
XRN1-205ENST00000465507 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.3□□□□□ -2.62
XRN1-205ENST00000465507 ANKRD36CQ5JPF3 1778 aa-1.31□□□□□ -2.62
XRN1-205ENST00000465507 ITSN2Q9NZM3 1697 aa-1.31□□□□□ -2.62
XRN1-205ENST00000465507 RB1CC1Q8TDY2 1594 aa-1.31□□□□□ -2.62
XRN1-205ENST00000465507 COL12A1Q99715 3063 aa-1.31□□□□□ -2.62
XRN1-205ENST00000465507 IGLV5-48A0A075B6I7 105 aa-1.32□□□□□ -2.62
XRN1-205ENST00000465507 ETDCA0A1B0GVM5 59 aa-1.32□□□□□ -2.62
XRN1-205ENST00000465507 DYNC1H1Q14204 4646 aaKnown RBP-1.32□□□□□ -2.62
XRN1-205ENST00000465507 CCDC18Q5T9S5 1454 aa-1.32□□□□□ -2.62
XRN1-205ENST00000465507 NIPBLQ6KC79 2804 aaeCLIP-1.33□□□□□ -2.62
XRN1-205ENST00000465507 CFAP74Q9C0B2 1584 aa-1.33□□□□□ -2.62
XRN1-205ENST00000465507 MINOS1Q5TGZ0 78 aa-1.33□□□□□ -2.62
XRN1-205ENST00000465507 TOGARAM1Q9Y4F4 1720 aa-1.33□□□□□ -2.62
XRN1-205ENST00000465507 INO80Q9ULG1 1556 aaPredicted RBP-1.34□□□□□ -2.62
XRN1-205ENST00000465507 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.34□□□□□ -2.62
XRN1-205ENST00000465507 PARP4Q9UKK3 1724 aaKnown RBP-1.35□□□□□ -2.62
XRN1-205ENST00000465507 LMTK2Q8IWU2 1503 aa-1.35□□□□□ -2.62
XRN1-205ENST00000465507 RYR2Q92736 4967 aa-1.35□□□□□ -2.63
XRN1-205ENST00000465507 MMP24-AS1A0A0U1RRL7 71 aa-1.35□□□□□ -2.63
XRN1-205ENST00000465507 SMARCA2P51531 1590 aa-1.35□□□□□ -2.63
XRN1-205ENST00000465507 H3BVH4 76 aa-1.36□□□□□ -2.63
XRN1-205ENST00000465507 SMR3BP02814 79 aaPredicted RBP-1.36□□□□□ -2.63
XRN1-205ENST00000465507 ANKARQ7Z5J8 1434 aa-1.37□□□□□ -2.63
XRN1-205ENST00000465507 SRCAPQ6ZRS2 3230 aa-1.37□□□□□ -2.63
XRN1-205ENST00000465507 NRAPQ86VF7 1730 aa-1.37□□□□□ -2.63
XRN1-205ENST00000465507 KIF1AQ12756 1690 aa-1.38□□□□□ -2.63
XRN1-205ENST00000465507 TNP1P09430 55 aa-1.38□□□□□ -2.63
XRN1-205ENST00000465507 NCBP2-AS2Q69YL0 99 aa-1.38□□□□□ -2.63
XRN1-205ENST00000465507 DIP2AQ14689 1571 aa-1.38□□□□□ -2.63
XRN1-205ENST00000465507 CELSR3Q9NYQ7 3312 aa-1.4□□□□□ -2.63
XRN1-205ENST00000465507 C6orf48Q9UBA6 75 aa-1.4□□□□□ -2.63
XRN1-205ENST00000465507 ITPR1Q14643 2758 aa-1.41□□□□□ -2.63
XRN1-205ENST00000465507 DEFB114Q30KQ6 69 aa-1.41□□□□□ -2.64
XRN1-205ENST00000465507 CLPSL2Q6UWE3 100 aa-1.41□□□□□ -2.64
XRN1-205ENST00000465507 KRTAP8-1Q8IUC2 63 aa-1.41□□□□□ -2.64
XRN1-205ENST00000465507 DNAH17Q9UFH2 4485 aa-1.41□□□□□ -2.64
XRN1-205ENST00000465507 RRBP1Q9P2E9 1410 aaKnown RBP-1.41□□□□□ -2.64
XRN1-205ENST00000465507 NHSQ6T4R5 1651 aa-1.42□□□□□ -2.64
XRN1-205ENST00000465507 LRRIQ1Q96JM4 1722 aa-1.42□□□□□ -2.64
XRN1-205ENST00000465507 H3BUA1 57 aa-1.42□□□□□ -2.64
XRN1-205ENST00000465507 ABCA8O94911 1581 aa-1.42□□□□□ -2.64
XRN1-205ENST00000465507 CHD7Q9P2D1 2997 aa-1.43□□□□□ -2.64
XRN1-205ENST00000465507 SFTA3P0C7M3 94 aa-1.43□□□□□ -2.64
XRN1-205ENST00000465507 FCER1GP30273 86 aa-1.43□□□□□ -2.64
XRN1-205ENST00000465507 LRBAP50851 2863 aa-1.44□□□□□ -2.64
XRN1-205ENST00000465507 MT1XP80297 61 aa-1.44□□□□□ -2.64
XRN1-205ENST00000465507 ABCC6O95255 1503 aa-1.45□□□□□ -2.64
XRN1-205ENST00000465507 ATXN8Q156A1 80 aa-1.45□□□□□ -2.64
XRN1-205ENST00000465507 ADGRG4Q8IZF6 3080 aa-1.46□□□□□ -2.64
XRN1-205ENST00000465507 NOP10Q9NPE3 64 aaKnown RBP-1.46□□□□□ -2.64
XRN1-205ENST00000465507 ASXL1Q8IXJ9 1541 aa-1.46□□□□□ -2.64
XRN1-205ENST00000465507 CDC42BPGQ6DT37 1551 aa-1.47□□□□□ -2.64
XRN1-205ENST00000465507 SPTAN1Q13813 2472 aaKnown RBP-1.47□□□□□ -2.64
XRN1-205ENST00000465507 HILPDAQ9Y5L2 63 aa-1.47□□□□□ -2.64
XRN1-205ENST00000465507 LY75O60449 1722 aa-1.47□□□□□ -2.64
XRN1-205ENST00000465507 CSMD1Q96PZ7 3565 aa-1.47□□□□□ -2.65
XRN1-205ENST00000465507 DNMBPQ6XZF7 1577 aa-1.48□□□□□ -2.65
XRN1-205ENST00000465507 CDC42BPAQ5VT25 1732 aa-1.49□□□□□ -2.65
XRN1-205ENST00000465507 DNAH10Q8IVF4 4471 aa-1.5□□□□□ -2.65
XRN1-205ENST00000465507 MYO9AB2RTY4 2548 aa-1.5□□□□□ -2.65
XRN1-205ENST00000465507 MAST1Q9Y2H9 1570 aa-1.51□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms