RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 Q75L30 129 aa6.43□□□□□ -1.38
XRN1-204ENST00000465074 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
XRN1-204ENST00000465074 RBM3P98179 157 aaKnown RBP6.41□□□□□ -1.38
XRN1-204ENST00000465074 DSCR8Q96T75 97 aa6.41□□□□□ -1.38
XRN1-204ENST00000465074 SMIM6P0DI80 62 aa6.4□□□□□ -1.38
XRN1-204ENST00000465074 M0R2T5 61 aa6.39□□□□□ -1.39
XRN1-204ENST00000465074 LINC00313P59037 77 aa6.39□□□□□ -1.39
XRN1-204ENST00000465074 MT1HP80294 61 aa6.39□□□□□ -1.39
XRN1-204ENST00000465074 BATFQ16520 125 aa6.39□□□□□ -1.39
XRN1-204ENST00000465074 ATXN8Q156A1 80 aa6.38□□□□□ -1.39
XRN1-204ENST00000465074 IGHV6-1A0A0B4J1U7 121 aa6.37□□□□□ -1.39
XRN1-204ENST00000465074 C9JAW5 83 aa6.37□□□□□ -1.39
XRN1-204ENST00000465074 H3BS24 57 aa6.37□□□□□ -1.39
XRN1-204ENST00000465074 A8MUU9 505 aa6.36□□□□□ -1.39
XRN1-204ENST00000465074 TSTD3H0UI37 97 aa6.36□□□□□ -1.39
XRN1-204ENST00000465074 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
XRN1-204ENST00000465074 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
XRN1-204ENST00000465074 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
XRN1-204ENST00000465074 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
XRN1-204ENST00000465074 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
XRN1-204ENST00000465074 LYRM7Q5U5X0 104 aa6.31□□□□□ -1.4
XRN1-204ENST00000465074 JMJD7-PLA2G4BH0Y9G9 81 aa6.3□□□□□ -1.4
XRN1-204ENST00000465074 TRBV20-1A0A075B6N2 111 aa6.29□□□□□ -1.4
XRN1-204ENST00000465074 LOC105371267A0A1B0GV96 52 aa6.29□□□□□ -1.4
XRN1-204ENST00000465074 A0A1B0GVX0 72 aa6.29□□□□□ -1.4
XRN1-204ENST00000465074 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
XRN1-204ENST00000465074 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
XRN1-204ENST00000465074 Q6ZQT0 140 aa6.28□□□□□ -1.4
XRN1-204ENST00000465074 C14orf132Q9NPU4 83 aa6.28□□□□□ -1.4
XRN1-204ENST00000465074 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
XRN1-204ENST00000465074 LOC110117498A0A087WWA1 95 aa6.26□□□□□ -1.41
XRN1-204ENST00000465074 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
XRN1-204ENST00000465074 J3KT08 172 aa6.26□□□□□ -1.41
XRN1-204ENST00000465074 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
XRN1-204ENST00000465074 NDUFB1O75438 58 aa6.25□□□□□ -1.41
XRN1-204ENST00000465074 MTURNQ8N3F0 131 aa6.25□□□□□ -1.41
XRN1-204ENST00000465074 FAM236DA0A1B0GTK5 79 aa6.24□□□□□ -1.41
XRN1-204ENST00000465074 C9orf118A6NHY6 69 aa6.24□□□□□ -1.41
XRN1-204ENST00000465074 FAM236CP0DP71 79 aa6.24□□□□□ -1.41
XRN1-204ENST00000465074 PDE6GP18545 87 aa6.24□□□□□ -1.41
XRN1-204ENST00000465074 TAX1BP3O14907 124 aa6.22□□□□□ -1.41
XRN1-204ENST00000465074 A0A1W2PPM0 123 aa6.21□□□□□ -1.42
XRN1-204ENST00000465074 NREPQ16612 68 aa6.21□□□□□ -1.42
XRN1-204ENST00000465074 A0A1B0GW54 56 aa6.19□□□□□ -1.42
XRN1-204ENST00000465074 A8MWP4 228 aa6.19□□□□□ -1.42
XRN1-204ENST00000465074 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
XRN1-204ENST00000465074 C8orf17Q9NRJ1 99 aa6.18□□□□□ -1.42
XRN1-204ENST00000465074 RBM12B-AS1Q9P1G2 102 aa6.18□□□□□ -1.42
XRN1-204ENST00000465074 IGKV3D-7A0A0C4DH55 119 aa6.17□□□□□ -1.42
XRN1-204ENST00000465074 H3BT86 120 aa6.17□□□□□ -1.42
XRN1-204ENST00000465074 ZCCHC13Q8WW36 166 aaKnown RBP6.17□□□□□ -1.42
XRN1-204ENST00000465074 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
XRN1-204ENST00000465074 SPCS1Q9Y6A9 102 aa6.15□□□□□ -1.42
XRN1-204ENST00000465074 HRES1P13985 223 aa6.14□□□□□ -1.43
XRN1-204ENST00000465074 Q6ZVQ6 151 aa6.13□□□□□ -1.43
XRN1-204ENST00000465074 PRR15Q8IV56 129 aa6.13□□□□□ -1.43
XRN1-204ENST00000465074 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
XRN1-204ENST00000465074 SPINK7P58062 85 aa6.12□□□□□ -1.43
XRN1-204ENST00000465074 Q8N9P0 234 aaPredicted RBP6.12□□□□□ -1.43
XRN1-204ENST00000465074 NDUFS5O43920 106 aa6.11□□□□□ -1.43
XRN1-204ENST00000465074 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
XRN1-204ENST00000465074 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
XRN1-204ENST00000465074 K7EQZ3 153 aa6.09□□□□□ -1.43
XRN1-204ENST00000465074 BPY2O14599 106 aa6.09□□□□□ -1.43
XRN1-204ENST00000465074 COL5A1-AS1Q5SY13 56 aa6.09□□□□□ -1.43
XRN1-204ENST00000465074 MMP24-AS1A0A0U1RRL7 71 aa6.08□□□□□ -1.44
XRN1-204ENST00000465074 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
XRN1-204ENST00000465074 MRPL34Q9BQ48 92 aaKnown RBP6.08□□□□□ -1.44
XRN1-204ENST00000465074 TMEM254Q8TBM7 123 aa6.07□□□□□ -1.44
XRN1-204ENST00000465074 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
XRN1-204ENST00000465074 WFDC13Q8IUB5 93 aa6.06□□□□□ -1.44
XRN1-204ENST00000465074 PCP4L1A6NKN8 68 aa6.05□□□□□ -1.44
XRN1-204ENST00000465074 Q8N9L7 120 aa6.05□□□□□ -1.44
XRN1-204ENST00000465074 K7EP34 96 aa6.02□□□□□ -1.45
XRN1-204ENST00000465074 CASC2Q6XLA1 102 aa6□□□□□ -1.45
XRN1-204ENST00000465074 IGKV2D-30A0A075B6S6 120 aa5.99□□□□□ -1.45
XRN1-204ENST00000465074 IGKV2-30P06310 120 aa5.99□□□□□ -1.45
XRN1-204ENST00000465074 UBL5Q9BZL1 73 aa5.99□□□□□ -1.45
XRN1-204ENST00000465074 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
XRN1-204ENST00000465074 MT2AP02795 61 aa5.98□□□□□ -1.45
XRN1-204ENST00000465074 LINC00846Q9NV44 126 aa5.98□□□□□ -1.45
XRN1-204ENST00000465074 HCG22E2RYF7 251 aa5.97□□□□□ -1.45
XRN1-204ENST00000465074 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
XRN1-204ENST00000465074 GTF2H5Q6ZYL4 71 aa5.97□□□□□ -1.45
XRN1-204ENST00000465074 Q5W150 140 aa5.95□□□□□ -1.46
XRN1-204ENST00000465074 MT1FP04733 61 aa5.93□□□□□ -1.46
XRN1-204ENST00000465074 F8W1H4 67 aa5.91□□□□□ -1.46
XRN1-204ENST00000465074 ETDBQ3ZM63 59 aa5.91□□□□□ -1.46
XRN1-204ENST00000465074 C7orf65Q6ZTY9 151 aa5.91□□□□□ -1.46
XRN1-204ENST00000465074 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.46
XRN1-204ENST00000465074 CXCL6P80162 114 aa5.89□□□□□ -1.47
XRN1-204ENST00000465074 C4orf26Q17RF5 130 aa5.86□□□□□ -1.47
XRN1-204ENST00000465074 TP53AIP1Q9HCN2 124 aa5.78□□□□□ -1.48
XRN1-204ENST00000465074 USH2AO75445 5202 aa5.76□□□□□ -1.49
XRN1-204ENST00000465074 ACYP1P07311 99 aa5.75□□□□□ -1.49
XRN1-204ENST00000465074 C5orf47Q569G3 176 aa5.75□□□□□ -1.49
XRN1-204ENST00000465074 C1orf64Q8NEQ6 169 aa5.75□□□□□ -1.49
XRN1-204ENST00000465074 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
XRN1-204ENST00000465074 S4R3F8 94 aa5.72□□□□□ -1.49
XRN1-204ENST00000465074 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms