RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 RETNLBQ9BQ08 111 aa5.1□□□□□ -1.59
NUDCD3-204ENST00000464812 MUC17Q685J3 4493 aa5.09□□□□□ -1.59
NUDCD3-204ENST00000464812 PDE6GP18545 87 aa5.09□□□□□ -1.59
NUDCD3-204ENST00000464812 RPS29P62273 56 aaKnown RBP5.09□□□□□ -1.59
NUDCD3-204ENST00000464812 Q96NJ1 140 aa5.08□□□□□ -1.6
NUDCD3-204ENST00000464812 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
NUDCD3-204ENST00000464812 Q5XG85 94 aa5.07□□□□□ -1.6
NUDCD3-204ENST00000464812 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
NUDCD3-204ENST00000464812 ASB16-AS1Q495Z4 193 aa5.05□□□□□ -1.6
NUDCD3-204ENST00000464812 C1orf195Q5TG92 126 aa5.05□□□□□ -1.6
NUDCD3-204ENST00000464812 LINC00846Q9NV44 126 aa5.05□□□□□ -1.6
NUDCD3-204ENST00000464812 SS18L2Q9UHA2 77 aa5.03□□□□□ -1.6
NUDCD3-204ENST00000464812 MUC2Q02817 5179 aa5.02□□□□□ -1.61
NUDCD3-204ENST00000464812 A0A1B0GW54 56 aa5.02□□□□□ -1.61
NUDCD3-204ENST00000464812 K7ERU9 68 aa5.02□□□□□ -1.61
NUDCD3-204ENST00000464812 DEFB116Q30KQ4 102 aa5.02□□□□□ -1.61
NUDCD3-204ENST00000464812 Q6ZVQ6 151 aa5.02□□□□□ -1.61
NUDCD3-204ENST00000464812 LINC00472Q9H8W2 130 aa5.02□□□□□ -1.61
NUDCD3-204ENST00000464812 FAM240AA0A1B0GVK7 77 aa5.01□□□□□ -1.61
NUDCD3-204ENST00000464812 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
NUDCD3-204ENST00000464812 J3QR89 54 aa5□□□□□ -1.61
NUDCD3-204ENST00000464812 IGKV4-1P06312 121 aa4.98□□□□□ -1.61
NUDCD3-204ENST00000464812 NREPQ16612 68 aa4.98□□□□□ -1.61
NUDCD3-204ENST00000464812 SIGMAR1Q99720 223 aa4.98□□□□□ -1.61
NUDCD3-204ENST00000464812 ACYP1P07311 99 aa4.97□□□□□ -1.61
NUDCD3-204ENST00000464812 DSCR10P59022 87 aa4.97□□□□□ -1.61
NUDCD3-204ENST00000464812 PRR4Q16378 134 aa4.97□□□□□ -1.61
NUDCD3-204ENST00000464812 FP248Q71RG6 208 aaPredicted RBP4.97□□□□□ -1.61
NUDCD3-204ENST00000464812 IGLV7-46A0A075B6I9 117 aa4.96□□□□□ -1.62
NUDCD3-204ENST00000464812 UBL5Q9BZL1 73 aa4.96□□□□□ -1.62
NUDCD3-204ENST00000464812 Q8N9L7 120 aa4.95□□□□□ -1.62
NUDCD3-204ENST00000464812 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
NUDCD3-204ENST00000464812 K7EQZ3 153 aa4.94□□□□□ -1.62
NUDCD3-204ENST00000464812 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
NUDCD3-204ENST00000464812 NOTCH2NLQ7Z3S9 236 aa4.94□□□□□ -1.62
NUDCD3-204ENST00000464812 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
NUDCD3-204ENST00000464812 J3KT08 172 aa4.93□□□□□ -1.62
NUDCD3-204ENST00000464812 BPY2O14599 106 aa4.93□□□□□ -1.62
NUDCD3-204ENST00000464812 A0A1B0GVX0 72 aa4.92□□□□□ -1.62
NUDCD3-204ENST00000464812 A8MWP4 228 aa4.92□□□□□ -1.62
NUDCD3-204ENST00000464812 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
NUDCD3-204ENST00000464812 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
NUDCD3-204ENST00000464812 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
NUDCD3-204ENST00000464812 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
NUDCD3-204ENST00000464812 CXCL6P80162 114 aa4.9□□□□□ -1.63
NUDCD3-204ENST00000464812 PRR15Q8IV56 129 aa4.9□□□□□ -1.63
NUDCD3-204ENST00000464812 MMP24-AS1A0A0U1RRL7 71 aa4.89□□□□□ -1.63
NUDCD3-204ENST00000464812 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
NUDCD3-204ENST00000464812 ATP5EP2Q5VTU8 51 aa4.89□□□□□ -1.63
NUDCD3-204ENST00000464812 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
NUDCD3-204ENST00000464812 C8orf17Q9NRJ1 99 aa4.88□□□□□ -1.63
NUDCD3-204ENST00000464812 C8orf87E5RJ46 101 aa4.86□□□□□ -1.63
NUDCD3-204ENST00000464812 NDUFB1O75438 58 aa4.86□□□□□ -1.63
NUDCD3-204ENST00000464812 MT-ATP8P03928 68 aa4.86□□□□□ -1.63
NUDCD3-204ENST00000464812 LINC00313P59037 77 aa4.86□□□□□ -1.63
NUDCD3-204ENST00000464812 A0A087WVE0 104 aa4.85□□□□□ -1.63
NUDCD3-204ENST00000464812 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
NUDCD3-204ENST00000464812 WFDC13Q8IUB5 93 aa4.83□□□□□ -1.64
NUDCD3-204ENST00000464812 HCG22E2RYF7 251 aa4.82□□□□□ -1.64
NUDCD3-204ENST00000464812 HIST1H4AP62805 103 aaKnown RBP4.82□□□□□ -1.64
NUDCD3-204ENST00000464812 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
NUDCD3-204ENST00000464812 hDV103S1A0JD37 113 aa4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 A8MUU9 505 aa4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 SCGB1A1P11684 91 aa4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 PCP4P48539 62 aa4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 TMEM254Q8TBM7 123 aa4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
NUDCD3-204ENST00000464812 Q75L30 129 aa4.8□□□□□ -1.64
NUDCD3-204ENST00000464812 MRPL34Q9BQ48 92 aaKnown RBP4.8□□□□□ -1.64
NUDCD3-204ENST00000464812 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
NUDCD3-204ENST00000464812 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
NUDCD3-204ENST00000464812 PCOTHQ58A44 107 aa4.75□□□□□ -1.65
NUDCD3-204ENST00000464812 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
NUDCD3-204ENST00000464812 IMUPQ9GZP8 106 aa4.75□□□□□ -1.65
NUDCD3-204ENST00000464812 NDUFS5O43920 106 aa4.74□□□□□ -1.65
NUDCD3-204ENST00000464812 FAM236AA0A1B0GUQ0 79 aa4.72□□□□□ -1.65
NUDCD3-204ENST00000464812 FAM236BA0A1B0GV22 79 aa4.72□□□□□ -1.65
NUDCD3-204ENST00000464812 Q5W150 140 aa4.72□□□□□ -1.65
NUDCD3-204ENST00000464812 ZCCHC13Q8WW36 166 aaKnown RBP4.72□□□□□ -1.65
NUDCD3-204ENST00000464812 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
NUDCD3-204ENST00000464812 OCR1Q9BZK8 76 aa4.7□□□□□ -1.66
NUDCD3-204ENST00000464812 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
NUDCD3-204ENST00000464812 ATP11AUNQ6ZP68 121 aa4.69□□□□□ -1.66
NUDCD3-204ENST00000464812 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
NUDCD3-204ENST00000464812 TP53AIP1Q9HCN2 124 aa4.66□□□□□ -1.66
NUDCD3-204ENST00000464812 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
NUDCD3-204ENST00000464812 ATOX1O00244 68 aa4.63□□□□□ -1.67
NUDCD3-204ENST00000464812 UQCRQO14949 82 aa4.63□□□□□ -1.67
NUDCD3-204ENST00000464812 H0Y9P7 68 aa4.62□□□□□ -1.67
NUDCD3-204ENST00000464812 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
NUDCD3-204ENST00000464812 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
NUDCD3-204ENST00000464812 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
NUDCD3-204ENST00000464812 SPINK7P58062 85 aa4.61□□□□□ -1.67
NUDCD3-204ENST00000464812 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
NUDCD3-204ENST00000464812 HRES1P13985 223 aa4.6□□□□□ -1.67
NUDCD3-204ENST00000464812 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
NUDCD3-204ENST00000464812 C7orf65Q6ZTY9 151 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms