RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 SAMD9LQ8IVG5 1584 aa0.49□□□□□ -2.33
USP25-207ENST00000464435 PKD1L2Q7Z442 2459 aa0.48□□□□□ -2.33
USP25-207ENST00000464435 NDUFA1O15239 70 aa0.48□□□□□ -2.33
USP25-207ENST00000464435 ACANP16112 2415 aa0.48□□□□□ -2.33
USP25-207ENST00000464435 H3BNG1 76 aa0.47□□□□□ -2.33
USP25-207ENST00000464435 DEFB131AP59861 70 aa0.47□□□□□ -2.33
USP25-207ENST00000464435 MAST4O15021 2626 aa0.47□□□□□ -2.33
USP25-207ENST00000464435 LYSTQ99698 3801 aa0.46□□□□□ -2.34
USP25-207ENST00000464435 APC2O95996 2303 aa0.46□□□□□ -2.34
USP25-207ENST00000464435 M0QY20 66 aa0.46□□□□□ -2.34
USP25-207ENST00000464435 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
USP25-207ENST00000464435 NBASA2RRP1 2371 aa0.46□□□□□ -2.34
USP25-207ENST00000464435 WNK1Q9H4A3 2382 aa0.46□□□□□ -2.34
USP25-207ENST00000464435 FLNBO75369 2602 aaKnown RBP0.45□□□□□ -2.34
USP25-207ENST00000464435 CELSR1Q9NYQ6 3014 aa0.45□□□□□ -2.34
USP25-207ENST00000464435 LPAP08519 4548 aa0.45□□□□□ -2.34
USP25-207ENST00000464435 HRNRQ86YZ3 2850 aaPredicted RBP0.45□□□□□ -2.34
USP25-207ENST00000464435 NF1P21359 2839 aa0.45□□□□□ -2.34
USP25-207ENST00000464435 MYCBP2O75592 4640 aa0.45□□□□□ -2.34
USP25-207ENST00000464435 VPS13BQ7Z7G8 4022 aa0.44□□□□□ -2.34
USP25-207ENST00000464435 MMP24-AS1A0A0U1RRL7 71 aa0.44□□□□□ -2.34
USP25-207ENST00000464435 SPRR2BP35325 72 aa0.44□□□□□ -2.34
USP25-207ENST00000464435 GCN1Q92616 2671 aaKnown RBP0.43□□□□□ -2.34
USP25-207ENST00000464435 FLNCQ14315 2725 aa0.43□□□□□ -2.34
USP25-207ENST00000464435 SPTBN4Q9H254 2564 aa0.43□□□□□ -2.34
USP25-207ENST00000464435 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
USP25-207ENST00000464435 DCHS2Q6V1P9 2916 aa0.42□□□□□ -2.34
USP25-207ENST00000464435 HECTD4Q9Y4D8 3996 aa0.42□□□□□ -2.34
USP25-207ENST00000464435 A0A0C4DFX4 3053 aa0.4□□□□□ -2.35
USP25-207ENST00000464435 A8MTW9 85 aa0.4□□□□□ -2.35
USP25-207ENST00000464435 SRRM2Q9UQ35 2752 aaKnown RBP0.4□□□□□ -2.35
USP25-207ENST00000464435 PDZD2O15018 2839 aa0.4□□□□□ -2.35
USP25-207ENST00000464435 ZZEF1O43149 2961 aa0.39□□□□□ -2.35
USP25-207ENST00000464435 FLNAP21333 2647 aaKnown RBP0.38□□□□□ -2.35
USP25-207ENST00000464435 ANKRD11Q6UB99 2663 aaPredicted RBP0.37□□□□□ -2.35
USP25-207ENST00000464435 SETD2Q9BYW2 2564 aaPredicted RBP0.37□□□□□ -2.35
USP25-207ENST00000464435 TNP1P09430 55 aa0.37□□□□□ -2.35
USP25-207ENST00000464435 HSPG2P98160 4391 aa0.36□□□□□ -2.35
USP25-207ENST00000464435 MTORP42345 2549 aa0.36□□□□□ -2.35
USP25-207ENST00000464435 M0QZ58 72 aa0.36□□□□□ -2.35
USP25-207ENST00000464435 DEFB110Q30KQ9 67 aa0.36□□□□□ -2.35
USP25-207ENST00000464435 PKD1P98161 4303 aa0.36□□□□□ -2.35
USP25-207ENST00000464435 DMBT1Q9UGM3 2413 aaPredicted RBP0.36□□□□□ -2.35
USP25-207ENST00000464435 COL6A3P12111 3177 aa0.35□□□□□ -2.35
USP25-207ENST00000464435 DMXL1Q9Y485 3027 aa0.35□□□□□ -2.35
USP25-207ENST00000464435 LRRK2Q5S007 2527 aa0.34□□□□□ -2.35
USP25-207ENST00000464435 SPRR2AP35326 72 aa0.34□□□□□ -2.36
USP25-207ENST00000464435 DNAH3Q8TD57 4116 aa0.34□□□□□ -2.36
USP25-207ENST00000464435 CUBNO60494 3623 aa0.34□□□□□ -2.36
USP25-207ENST00000464435 UTP20O75691 2785 aaKnown RBP0.34□□□□□ -2.36
USP25-207ENST00000464435 TACC2O95359 2948 aa0.33□□□□□ -2.36
USP25-207ENST00000464435 PKHD1P08F94 4074 aa0.33□□□□□ -2.36
USP25-207ENST00000464435 MAP1AP78559 2803 aaPredicted RBP0.32□□□□□ -2.36
USP25-207ENST00000464435 TENM2Q9NT68 2774 aa0.32□□□□□ -2.36
USP25-207ENST00000464435 POLR2KP53803 58 aaKnown RBP0.32□□□□□ -2.36
USP25-207ENST00000464435 ANKHD1Q8IWZ3 2542 aaKnown RBP0.32□□□□□ -2.36
USP25-207ENST00000464435 STAB1Q9NY15 2570 aa0.32□□□□□ -2.36
USP25-207ENST00000464435 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
USP25-207ENST00000464435 ACACAQ13085 2346 aa0.31□□□□□ -2.36
USP25-207ENST00000464435 SONP18583 2426 aaKnown RBP0.3□□□□□ -2.36
USP25-207ENST00000464435 SPG11Q96JI7 2443 aa0.3□□□□□ -2.36
USP25-207ENST00000464435 FLGP20930 4061 aaPredicted RBP0.3□□□□□ -2.36
USP25-207ENST00000464435 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
USP25-207ENST00000464435 MROH2BQ7Z745 1585 aa0.3□□□□□ -2.36
USP25-207ENST00000464435 DUOX1Q9NRD9 1551 aa0.3□□□□□ -2.36
USP25-207ENST00000464435 HTTP42858 3142 aa0.3□□□□□ -2.36
USP25-207ENST00000464435 GPR98Q8WXG9 6306 aa0.3□□□□□ -2.36
USP25-207ENST00000464435 SACSQ9NZJ4 4579 aa0.3□□□□□ -2.36
USP25-207ENST00000464435 AKAP9Q99996 3911 aa0.29□□□□□ -2.36
USP25-207ENST00000464435 HMCN2Q8NDA2 5059 aa0.29□□□□□ -2.36
USP25-207ENST00000464435 TGP01266 2768 aa0.28□□□□□ -2.36
USP25-207ENST00000464435 KALRNO60229 2985 aa0.28□□□□□ -2.36
USP25-207ENST00000464435 TEP1Q99973 2627 aaKnown RBP0.28□□□□□ -2.37
USP25-207ENST00000464435 RANBP2P49792 3224 aaKnown RBP0.28□□□□□ -2.37
USP25-207ENST00000464435 ZANQ9Y493 2812 aa0.28□□□□□ -2.37
USP25-207ENST00000464435 GCC2Q8IWJ2 1684 aa0.27□□□□□ -2.37
USP25-207ENST00000464435 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
USP25-207ENST00000464435 EPG5Q9HCE0 2579 aa0.27□□□□□ -2.37
USP25-207ENST00000464435 HIVEP1P15822 2718 aa0.27□□□□□ -2.37
USP25-207ENST00000464435 SNRPGP62308 76 aaKnown RBP0.27□□□□□ -2.37
USP25-207ENST00000464435 ANK3Q12955 4377 aaKnown RBP0.27□□□□□ -2.37
USP25-207ENST00000464435 FASNP49327 2511 aaKnown RBP0.27□□□□□ -2.37
USP25-207ENST00000464435 NBEAQ8NFP9 2946 aa0.26□□□□□ -2.37
USP25-207ENST00000464435 CLPSL2Q6UWE3 100 aa0.26□□□□□ -2.37
USP25-207ENST00000464435 NBEAL1Q6ZS30 2694 aa0.26□□□□□ -2.37
USP25-207ENST00000464435 SPENQ96T58 3664 aaKnown RBP0.26□□□□□ -2.37
USP25-207ENST00000464435 DNAH9Q9NYC9 4486 aa0.25□□□□□ -2.37
USP25-207ENST00000464435 PKHD1L1Q86WI1 4243 aa0.25□□□□□ -2.37
USP25-207ENST00000464435 MT1AP04731 61 aa0.25□□□□□ -2.37
USP25-207ENST00000464435 SPRR2EP22531 72 aa0.25□□□□□ -2.37
USP25-207ENST00000464435 STAB2Q8WWQ8 2551 aa0.25□□□□□ -2.37
USP25-207ENST00000464435 SVEP1Q4LDE5 3571 aa0.25□□□□□ -2.37
USP25-207ENST00000464435 COL6A5A8TX70 2615 aa0.24□□□□□ -2.37
USP25-207ENST00000464435 ACACBO00763 2458 aa0.24□□□□□ -2.37
USP25-207ENST00000464435 FAM186AA6NE01 2351 aa0.24□□□□□ -2.37
USP25-207ENST00000464435 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
USP25-207ENST00000464435 WDR87Q6ZQQ6 2873 aa0.24□□□□□ -2.37
USP25-207ENST00000464435 DNAH11Q96DT5 4516 aa0.24□□□□□ -2.37
USP25-207ENST00000464435 NBEAL2Q6ZNJ1 2754 aa0.23□□□□□ -2.37
USP25-207ENST00000464435 LRP1BQ9NZR2 4599 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms