RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 M0R2T5 61 aa12.39□□□□□ -0.43
SSNA1-203ENST00000463511 GTF2H5Q6ZYL4 71 aa12.39□□□□□ -0.43
SSNA1-203ENST00000463511 PDE6GP18545 87 aa12.37□□□□□ -0.43
SSNA1-203ENST00000463511 Q96NJ1 140 aa12.37□□□□□ -0.43
SSNA1-203ENST00000463511 RPL37P61927 97 aaKnown RBP12.35□□□□□ -0.43
SSNA1-203ENST00000463511 FLGP20930 4061 aaPredicted RBP12.35□□□□□ -0.43
SSNA1-203ENST00000463511 COX6B2Q6YFQ2 88 aa12.34□□□□□ -0.43
SSNA1-203ENST00000463511 A0A1B0GW54 56 aa12.29□□□□□ -0.44
SSNA1-203ENST00000463511 C21orf62-AS1Q17RA5 79 aa12.29□□□□□ -0.44
SSNA1-203ENST00000463511 LINC00472Q9H8W2 130 aa12.29□□□□□ -0.44
SSNA1-203ENST00000463511 F8W1H4 67 aa12.26□□□□□ -0.45
SSNA1-203ENST00000463511 DEFB116Q30KQ4 102 aa12.24□□□□□ -0.45
SSNA1-203ENST00000463511 IGKV4-1P06312 121 aa12.23□□□□□ -0.45
SSNA1-203ENST00000463511 SIGMAR1Q99720 223 aa12.2□□□□□ -0.46
SSNA1-203ENST00000463511 A0A1B0GV90 55 aa12.17□□□□□ -0.46
SSNA1-203ENST00000463511 ETDBQ3ZM63 59 aa12.15□□□□□ -0.46
SSNA1-203ENST00000463511 J3KT08 172 aa12.12□□□□□ -0.47
SSNA1-203ENST00000463511 NREPQ16612 68 aa12.12□□□□□ -0.47
SSNA1-203ENST00000463511 DSCR10P59022 87 aa12.1□□□□□ -0.47
SSNA1-203ENST00000463511 LINC00313P59037 77 aa12.06□□□□□ -0.48
SSNA1-203ENST00000463511 NOTCH2NLQ7Z3S9 236 aa12.06□□□□□ -0.48
SSNA1-203ENST00000463511 IGHV6-1A0A0B4J1U7 121 aa12.05□□□□□ -0.48
SSNA1-203ENST00000463511 A0A1B0GVX0 72 aa12.05□□□□□ -0.48
SSNA1-203ENST00000463511 ATP11AUNQ6ZP68 121 aa12.02□□□□□ -0.49
SSNA1-203ENST00000463511 Q6ZVQ6 151 aa12.02□□□□□ -0.49
SSNA1-203ENST00000463511 A8MWP4 228 aa12.01□□□□□ -0.49
SSNA1-203ENST00000463511 LINC00846Q9NV44 126 aa12.01□□□□□ -0.49
SSNA1-203ENST00000463511 KRTAP16-1A8MUX0 517 aa12□□□□□ -0.49
SSNA1-203ENST00000463511 Q75L30 129 aa12□□□□□ -0.49
SSNA1-203ENST00000463511 C8orf87E5RJ46 101 aa11.99□□□□□ -0.49
SSNA1-203ENST00000463511 NDUFB1O75438 58 aa11.99□□□□□ -0.49
SSNA1-203ENST00000463511 IGKV3D-7A0A0C4DH55 119 aa11.98□□□□□ -0.49
SSNA1-203ENST00000463511 C20orf166-AS1Q96NR2 134 aa11.98□□□□□ -0.49
SSNA1-203ENST00000463511 A8MUU9 505 aa11.97□□□□□ -0.49
SSNA1-203ENST00000463511 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.95□□□□□ -0.5
SSNA1-203ENST00000463511 BPY2O14599 106 aa11.94□□□□□ -0.5
SSNA1-203ENST00000463511 KRTAP9-7A8MTY7 169 aa11.93□□□□□ -0.5
SSNA1-203ENST00000463511 PRR15Q8IV56 129 aa11.93□□□□□ -0.5
SSNA1-203ENST00000463511 UBL5Q9BZL1 73 aa11.93□□□□□ -0.5
SSNA1-203ENST00000463511 C8orf17Q9NRJ1 99 aa11.91□□□□□ -0.5
SSNA1-203ENST00000463511 K7EQZ3 153 aa11.89□□□□□ -0.51
SSNA1-203ENST00000463511 KRTAP9-8Q9BYQ0 159 aa11.89□□□□□ -0.51
SSNA1-203ENST00000463511 USH2AO75445 5202 aa11.86□□□□□ -0.51
SSNA1-203ENST00000463511 SSPOA2VEC9 5147 aa11.84□□□□□ -0.51
SSNA1-203ENST00000463511 ACYP1P07311 99 aa11.83□□□□□ -0.52
SSNA1-203ENST00000463511 MMP24-AS1A0A0U1RRL7 71 aa11.82□□□□□ -0.52
SSNA1-203ENST00000463511 Q8N9L7 120 aa11.82□□□□□ -0.52
SSNA1-203ENST00000463511 FAM240AA0A1B0GVK7 77 aa11.8□□□□□ -0.52
SSNA1-203ENST00000463511 Q8N9P0 234 aaPredicted RBP11.79□□□□□ -0.52
SSNA1-203ENST00000463511 TMEM254Q8TBM7 123 aa11.75□□□□□ -0.53
SSNA1-203ENST00000463511 hDV103S1A0JD37 113 aa11.73□□□□□ -0.53
SSNA1-203ENST00000463511 CXCL6P80162 114 aa11.73□□□□□ -0.53
SSNA1-203ENST00000463511 MRPL34Q9BQ48 92 aaKnown RBP11.73□□□□□ -0.53
SSNA1-203ENST00000463511 MT2AP02795 61 aa11.69□□□□□ -0.54
SSNA1-203ENST00000463511 WFDC13Q8IUB5 93 aa11.68□□□□□ -0.54
SSNA1-203ENST00000463511 ZCCHC13Q8WW36 166 aaKnown RBP11.67□□□□□ -0.54
SSNA1-203ENST00000463511 CASC2Q6XLA1 102 aa11.66□□□□□ -0.54
SSNA1-203ENST00000463511 FCGBPQ9Y6R7 5405 aaPredicted RBP11.64□□□□□ -0.55
SSNA1-203ENST00000463511 FAM236DA0A1B0GTK5 79 aa11.63□□□□□ -0.55
SSNA1-203ENST00000463511 FAM236CP0DP71 79 aa11.63□□□□□ -0.55
SSNA1-203ENST00000463511 HCG22E2RYF7 251 aa11.62□□□□□ -0.55
SSNA1-203ENST00000463511 J3QR89 54 aa11.6□□□□□ -0.55
SSNA1-203ENST00000463511 LCE2BO14633 110 aa11.6□□□□□ -0.55
SSNA1-203ENST00000463511 MT1FP04733 61 aa11.6□□□□□ -0.55
SSNA1-203ENST00000463511 NDUFS5O43920 106 aa11.59□□□□□ -0.55
SSNA1-203ENST00000463511 ATP5EP2Q5VTU8 51 aa11.59□□□□□ -0.55
SSNA1-203ENST00000463511 KRTAP19-1Q8IUB9 90 aa11.59□□□□□ -0.55
SSNA1-203ENST00000463511 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
SSNA1-203ENST00000463511 KRTAP9-3Q9BYQ3 159 aa11.53□□□□□ -0.56
SSNA1-203ENST00000463511 KRTAP10-10P60014 251 aa11.52□□□□□ -0.57
SSNA1-203ENST00000463511 HRES1P13985 223 aa11.5□□□□□ -0.57
SSNA1-203ENST00000463511 MPLKIPQ8TAP9 179 aa11.5□□□□□ -0.57
SSNA1-203ENST00000463511 RBM12B-AS1Q9P1G2 102 aa11.5□□□□□ -0.57
SSNA1-203ENST00000463511 Q5W150 140 aa11.49□□□□□ -0.57
SSNA1-203ENST00000463511 SPINK7P58062 85 aa11.47□□□□□ -0.57
SSNA1-203ENST00000463511 HIST1H4AP62805 103 aaKnown RBP11.47□□□□□ -0.57
SSNA1-203ENST00000463511 K7ERU9 68 aa11.41□□□□□ -0.58
SSNA1-203ENST00000463511 A0A087WVE0 104 aa11.38□□□□□ -0.59
SSNA1-203ENST00000463511 TP53AIP1Q9HCN2 124 aa11.37□□□□□ -0.59
SSNA1-203ENST00000463511 IGKV2D-30A0A075B6S6 120 aa11.3□□□□□ -0.6
SSNA1-203ENST00000463511 IGKV2-30P06310 120 aa11.3□□□□□ -0.6
SSNA1-203ENST00000463511 MACF1Q9UPN3 7388 aaKnown RBP11.29□□□□□ -0.6
SSNA1-203ENST00000463511 C7orf65Q6ZTY9 151 aa11.28□□□□□ -0.6
SSNA1-203ENST00000463511 KRTAP19-6Q3LI70 58 aa11.25□□□□□ -0.61
SSNA1-203ENST00000463511 MT-ATP8P03928 68 aa11.22□□□□□ -0.61
SSNA1-203ENST00000463511 SYNE2Q8WXH0 6885 aaKnown RBP11.21□□□□□ -0.62
SSNA1-203ENST00000463511 UQCRQO14949 82 aa11.2□□□□□ -0.62
SSNA1-203ENST00000463511 IMUPQ9GZP8 106 aa11.19□□□□□ -0.62
SSNA1-203ENST00000463511 TRAV22A0A0B4J277 110 aa11.17□□□□□ -0.62
SSNA1-203ENST00000463511 OCR1Q9BZK8 76 aa11.14□□□□□ -0.63
SSNA1-203ENST00000463511 H0Y9P7 68 aa11.1□□□□□ -0.63
SSNA1-203ENST00000463511 CYP4F30PQ9H0H9 118 aa11.09□□□□□ -0.63
SSNA1-203ENST00000463511 C4orf26Q17RF5 130 aa11.08□□□□□ -0.64
SSNA1-203ENST00000463511 LOC101927531A0A1B0GV80 90 aa11.06□□□□□ -0.64
SSNA1-203ENST00000463511 ATOX1O00244 68 aa11.04□□□□□ -0.64
SSNA1-203ENST00000463511 SCGB1A1P11684 91 aa11.04□□□□□ -0.64
SSNA1-203ENST00000463511 H1FX-AS1Q4G0G2 97 aa11.01□□□□□ -0.65
SSNA1-203ENST00000463511 KRTAP6-3Q3LI67 103 aa10.98□□□□□ -0.65
SSNA1-203ENST00000463511 C5orf47Q569G3 176 aa10.98□□□□□ -0.65
SSNA1-203ENST00000463511 C1orf64Q8NEQ6 169 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms