RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PDE6GP18545 87 aa10.35□□□□□ -0.75
VARS-221ENST00000463184 Q6ZQT0 140 aa10.33□□□□□ -0.76
VARS-221ENST00000463184 GTF2H5Q6ZYL4 71 aa10.33□□□□□ -0.76
VARS-221ENST00000463184 C14orf132Q9NPU4 83 aa10.33□□□□□ -0.76
VARS-221ENST00000463184 C21orf62-AS1Q17RA5 79 aa10.32□□□□□ -0.76
VARS-221ENST00000463184 ATP11AUNQ6ZP68 121 aa10.31□□□□□ -0.76
VARS-221ENST00000463184 SMCPP49901 116 aaPredicted RBP10.3□□□□□ -0.76
VARS-221ENST00000463184 Q75L30 129 aa10.29□□□□□ -0.76
VARS-221ENST00000463184 Q96NJ1 140 aa10.29□□□□□ -0.76
VARS-221ENST00000463184 PRO0461Q9UI25 63 aa10.29□□□□□ -0.76
VARS-221ENST00000463184 A0A1B0GW54 56 aa10.28□□□□□ -0.76
VARS-221ENST00000463184 LINC00472Q9H8W2 130 aa10.24□□□□□ -0.77
VARS-221ENST00000463184 F8W1H4 67 aa10.21□□□□□ -0.77
VARS-221ENST00000463184 IGKV4-1P06312 121 aa10.2□□□□□ -0.78
VARS-221ENST00000463184 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.19□□□□□ -0.78
VARS-221ENST00000463184 SIGMAR1Q99720 223 aa10.19□□□□□ -0.78
VARS-221ENST00000463184 KRTAP9-7A8MTY7 169 aa10.18□□□□□ -0.78
VARS-221ENST00000463184 DEFB116Q30KQ4 102 aa10.17□□□□□ -0.78
VARS-221ENST00000463184 KRTAP9-8Q9BYQ0 159 aa10.15□□□□□ -0.78
VARS-221ENST00000463184 J3KT08 172 aa10.14□□□□□ -0.79
VARS-221ENST00000463184 NREPQ16612 68 aa10.12□□□□□ -0.79
VARS-221ENST00000463184 C20orf166-AS1Q96NR2 134 aa10.11□□□□□ -0.79
VARS-221ENST00000463184 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
VARS-221ENST00000463184 A8MUU9 505 aa10.07□□□□□ -0.8
VARS-221ENST00000463184 DSCR10P59022 87 aa10.07□□□□□ -0.8
VARS-221ENST00000463184 LINC00313P59037 77 aa10.07□□□□□ -0.8
VARS-221ENST00000463184 A0A1B0GV90 55 aa10.06□□□□□ -0.8
VARS-221ENST00000463184 USH2AO75445 5202 aa10.06□□□□□ -0.8
VARS-221ENST00000463184 IGHV6-1A0A0B4J1U7 121 aa10.05□□□□□ -0.8
VARS-221ENST00000463184 A0A1B0GVX0 72 aa10.05□□□□□ -0.8
VARS-221ENST00000463184 SSPOA2VEC9 5147 aa10.05□□□□□ -0.8
VARS-221ENST00000463184 NDUFB1O75438 58 aa10.04□□□□□ -0.8
VARS-221ENST00000463184 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
VARS-221ENST00000463184 A8MWP4 228 aa10.02□□□□□ -0.81
VARS-221ENST00000463184 NOTCH2NLQ7Z3S9 236 aa10.01□□□□□ -0.81
VARS-221ENST00000463184 Q6ZVQ6 151 aa10□□□□□ -0.81
VARS-221ENST00000463184 LINC00846Q9NV44 126 aa9.98□□□□□ -0.81
VARS-221ENST00000463184 IGKV3D-7A0A0C4DH55 119 aa9.97□□□□□ -0.81
VARS-221ENST00000463184 KRTAP16-1A8MUX0 517 aa9.97□□□□□ -0.81
VARS-221ENST00000463184 UBL5Q9BZL1 73 aa9.97□□□□□ -0.81
VARS-221ENST00000463184 BPY2O14599 106 aa9.96□□□□□ -0.82
VARS-221ENST00000463184 MT2AP02795 61 aa9.95□□□□□ -0.82
VARS-221ENST00000463184 PRR15Q8IV56 129 aa9.95□□□□□ -0.82
VARS-221ENST00000463184 C8orf17Q9NRJ1 99 aa9.93□□□□□ -0.82
VARS-221ENST00000463184 FAM236DA0A1B0GTK5 79 aa9.92□□□□□ -0.82
VARS-221ENST00000463184 FAM236CP0DP71 79 aa9.92□□□□□ -0.82
VARS-221ENST00000463184 FCGBPQ9Y6R7 5405 aaPredicted RBP9.89□□□□□ -0.83
VARS-221ENST00000463184 K7EQZ3 153 aa9.89□□□□□ -0.83
VARS-221ENST00000463184 LCE2BO14633 110 aa9.88□□□□□ -0.83
VARS-221ENST00000463184 KRTAP19-1Q8IUB9 90 aa9.88□□□□□ -0.83
VARS-221ENST00000463184 MT1FP04733 61 aa9.87□□□□□ -0.83
VARS-221ENST00000463184 ACYP1P07311 99 aa9.87□□□□□ -0.83
VARS-221ENST00000463184 RBM12B-AS1Q9P1G2 102 aa9.87□□□□□ -0.83
VARS-221ENST00000463184 KRTAP9-3Q9BYQ3 159 aa9.85□□□□□ -0.83
VARS-221ENST00000463184 MMP24-AS1A0A0U1RRL7 71 aa9.84□□□□□ -0.83
VARS-221ENST00000463184 KRTAP10-10P60014 251 aa9.84□□□□□ -0.83
VARS-221ENST00000463184 MPLKIPQ8TAP9 179 aa9.84□□□□□ -0.83
VARS-221ENST00000463184 FAM240AA0A1B0GVK7 77 aa9.83□□□□□ -0.84
VARS-221ENST00000463184 HRES1P13985 223 aa9.82□□□□□ -0.84
VARS-221ENST00000463184 Q8N9P0 234 aaPredicted RBP9.82□□□□□ -0.84
VARS-221ENST00000463184 Q8N9L7 120 aa9.81□□□□□ -0.84
VARS-221ENST00000463184 TMEM254Q8TBM7 123 aa9.81□□□□□ -0.84
VARS-221ENST00000463184 hDV103S1A0JD37 113 aa9.79□□□□□ -0.84
VARS-221ENST00000463184 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
VARS-221ENST00000463184 CXCL6P80162 114 aa9.78□□□□□ -0.84
VARS-221ENST00000463184 ZCCHC13Q8WW36 166 aaKnown RBP9.74□□□□□ -0.85
VARS-221ENST00000463184 CASC2Q6XLA1 102 aa9.73□□□□□ -0.85
VARS-221ENST00000463184 WFDC13Q8IUB5 93 aa9.72□□□□□ -0.85
VARS-221ENST00000463184 J3QR89 54 aa9.7□□□□□ -0.86
VARS-221ENST00000463184 HCG22E2RYF7 251 aa9.69□□□□□ -0.86
VARS-221ENST00000463184 NDUFS5O43920 106 aa9.68□□□□□ -0.86
VARS-221ENST00000463184 ATP5EP2Q5VTU8 51 aa9.68□□□□□ -0.86
VARS-221ENST00000463184 MACF1Q9UPN3 7388 aaKnown RBP9.65□□□□□ -0.86
VARS-221ENST00000463184 LINC00643Q86TS7 51 aa9.64□□□□□ -0.87
VARS-221ENST00000463184 KRTAP19-6Q3LI70 58 aa9.62□□□□□ -0.87
VARS-221ENST00000463184 SYNE2Q8WXH0 6885 aaKnown RBP9.61□□□□□ -0.87
VARS-221ENST00000463184 SPINK7P58062 85 aa9.57□□□□□ -0.88
VARS-221ENST00000463184 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
VARS-221ENST00000463184 Q5W150 140 aa9.54□□□□□ -0.88
VARS-221ENST00000463184 TP53AIP1Q9HCN2 124 aa9.51□□□□□ -0.89
VARS-221ENST00000463184 K7ERU9 68 aa9.5□□□□□ -0.89
VARS-221ENST00000463184 A0A087WVE0 104 aa9.45□□□□□ -0.9
VARS-221ENST00000463184 IGKV2D-30A0A075B6S6 120 aa9.43□□□□□ -0.9
VARS-221ENST00000463184 IGKV2-30P06310 120 aa9.43□□□□□ -0.9
VARS-221ENST00000463184 C7orf65Q6ZTY9 151 aa9.43□□□□□ -0.9
VARS-221ENST00000463184 KRTAP6-3Q3LI67 103 aa9.41□□□□□ -0.9
VARS-221ENST00000463184 UQCRQO14949 82 aa9.34□□□□□ -0.91
VARS-221ENST00000463184 TRAV22A0A0B4J277 110 aa9.32□□□□□ -0.92
VARS-221ENST00000463184 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
VARS-221ENST00000463184 MT-ATP8P03928 68 aa9.3□□□□□ -0.92
VARS-221ENST00000463184 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
VARS-221ENST00000463184 LOC101927531A0A1B0GV80 90 aa9.25□□□□□ -0.93
VARS-221ENST00000463184 ATOX1O00244 68 aa9.25□□□□□ -0.93
VARS-221ENST00000463184 OCR1Q9BZK8 76 aa9.25□□□□□ -0.93
VARS-221ENST00000463184 H0Y9P7 68 aa9.24□□□□□ -0.93
VARS-221ENST00000463184 SCGB1A1P11684 91 aa9.23□□□□□ -0.93
VARS-221ENST00000463184 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
VARS-221ENST00000463184 C4orf26Q17RF5 130 aa9.22□□□□□ -0.93
VARS-221ENST00000463184 MP68P56378 58 aa9.16□□□□□ -0.94
VARS-221ENST00000463184 C5orf47Q569G3 176 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms