RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 C3orf22Q8N5N4 141 aa4.54□□□□□ -1.68
GARNL3-212ENST00000463005 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
GARNL3-212ENST00000463005 Q8NBF4 154 aa4.54□□□□□ -1.68
GARNL3-212ENST00000463005 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
GARNL3-212ENST00000463005 F8W1H4 67 aa4.52□□□□□ -1.69
GARNL3-212ENST00000463005 JMJD7-PLA2G4BH0Y9G9 81 aa4.52□□□□□ -1.69
GARNL3-212ENST00000463005 DSCR8Q96T75 97 aa4.52□□□□□ -1.69
GARNL3-212ENST00000463005 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
GARNL3-212ENST00000463005 Q6JHZ5 121 aa4.51□□□□□ -1.69
GARNL3-212ENST00000463005 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
GARNL3-212ENST00000463005 VPS25Q9BRG1 176 aa4.5□□□□□ -1.69
GARNL3-212ENST00000463005 SSBP3-AS1Q7Z2R9 100 aa4.49□□□□□ -1.69
GARNL3-212ENST00000463005 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
GARNL3-212ENST00000463005 PDE6GP18545 87 aa4.47□□□□□ -1.69
GARNL3-212ENST00000463005 HRCT1Q6UXD1 115 aa4.47□□□□□ -1.69
GARNL3-212ENST00000463005 TEN1Q86WV5 123 aa4.47□□□□□ -1.69
GARNL3-212ENST00000463005 C14orf132Q9NPU4 83 aa4.47□□□□□ -1.69
GARNL3-212ENST00000463005 PRO0461Q9UI25 63 aa4.47□□□□□ -1.69
GARNL3-212ENST00000463005 IGLV8-61A0A075B6I0 122 aa4.46□□□□□ -1.7
GARNL3-212ENST00000463005 SPINK1P00995 79 aa4.46□□□□□ -1.7
GARNL3-212ENST00000463005 CCKP06307 115 aa4.46□□□□□ -1.7
GARNL3-212ENST00000463005 ETDBQ3ZM63 59 aa4.46□□□□□ -1.7
GARNL3-212ENST00000463005 IGFL1Q6UW32 110 aa4.46□□□□□ -1.7
GARNL3-212ENST00000463005 LIMD2Q9BT23 127 aa4.45□□□□□ -1.7
GARNL3-212ENST00000463005 SS18L2Q9UHA2 77 aa4.44□□□□□ -1.7
GARNL3-212ENST00000463005 LOC110117498A0A087WWA1 95 aa4.43□□□□□ -1.7
GARNL3-212ENST00000463005 A0A0G2JQZ4 141 aa4.43□□□□□ -1.7
GARNL3-212ENST00000463005 TRBV7-4A0A0J9YYF1 115 aa4.43□□□□□ -1.7
GARNL3-212ENST00000463005 CD164Q04900 197 aa4.43□□□□□ -1.7
GARNL3-212ENST00000463005 J3QR89 54 aa4.42□□□□□ -1.7
GARNL3-212ENST00000463005 RPS29P62273 56 aaKnown RBP4.42□□□□□ -1.7
GARNL3-212ENST00000463005 Q6ZQT0 140 aa4.42□□□□□ -1.7
GARNL3-212ENST00000463005 NOTCH2NLQ7Z3S9 236 aa4.42□□□□□ -1.7
GARNL3-212ENST00000463005 OBSCN-AS1Q96MR7 158 aa4.42□□□□□ -1.7
GARNL3-212ENST00000463005 A0A087WSZ3 146 aa4.41□□□□□ -1.7
GARNL3-212ENST00000463005 TRBV7-7A0A0K0K1E9 115 aa4.41□□□□□ -1.7
GARNL3-212ENST00000463005 MT1HP80294 61 aa4.41□□□□□ -1.7
GARNL3-212ENST00000463005 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
GARNL3-212ENST00000463005 Q6Q795 121 aa4.4□□□□□ -1.71
GARNL3-212ENST00000463005 A0A1B0GW54 56 aa4.39□□□□□ -1.71
GARNL3-212ENST00000463005 A0A1W2PNM2 257 aa4.39□□□□□ -1.71
GARNL3-212ENST00000463005 KRTAP19-2Q3LHN2 52 aa4.39□□□□□ -1.71
GARNL3-212ENST00000463005 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
GARNL3-212ENST00000463005 NREPQ16612 68 aa4.37□□□□□ -1.71
GARNL3-212ENST00000463005 UBL5Q9BZL1 73 aa4.37□□□□□ -1.71
GARNL3-212ENST00000463005 ACYP1P07311 99 aa4.36□□□□□ -1.71
GARNL3-212ENST00000463005 SIGMAR1Q99720 223 aa4.36□□□□□ -1.71
GARNL3-212ENST00000463005 K7ERU9 68 aa4.35□□□□□ -1.71
GARNL3-212ENST00000463005 Q5XG85 94 aa4.34□□□□□ -1.71
GARNL3-212ENST00000463005 FAM240AA0A1B0GVK7 77 aa4.33□□□□□ -1.72
GARNL3-212ENST00000463005 M0R2T5 61 aa4.33□□□□□ -1.72
GARNL3-212ENST00000463005 IGKV4-1P06312 121 aa4.33□□□□□ -1.72
GARNL3-212ENST00000463005 PCOTHQ58A44 107 aa4.33□□□□□ -1.72
GARNL3-212ENST00000463005 J3KT08 172 aa4.32□□□□□ -1.72
GARNL3-212ENST00000463005 BPY2O14599 106 aa4.32□□□□□ -1.72
GARNL3-212ENST00000463005 NDUFB1O75438 58 aa4.32□□□□□ -1.72
GARNL3-212ENST00000463005 Q6ZVQ6 151 aa4.32□□□□□ -1.72
GARNL3-212ENST00000463005 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
GARNL3-212ENST00000463005 LINC00846Q9NV44 126 aa4.32□□□□□ -1.72
GARNL3-212ENST00000463005 DEFB116Q30KQ4 102 aa4.31□□□□□ -1.72
GARNL3-212ENST00000463005 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
GARNL3-212ENST00000463005 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
GARNL3-212ENST00000463005 LINC00472Q9H8W2 130 aa4.28□□□□□ -1.72
GARNL3-212ENST00000463005 IGHV6-1A0A0B4J1U7 121 aa4.27□□□□□ -1.73
GARNL3-212ENST00000463005 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
GARNL3-212ENST00000463005 A8MWP4 228 aa4.26□□□□□ -1.73
GARNL3-212ENST00000463005 LINC00643Q86TS7 51 aa4.26□□□□□ -1.73
GARNL3-212ENST00000463005 Q96NJ1 140 aa4.26□□□□□ -1.73
GARNL3-212ENST00000463005 IGKV3D-7A0A0C4DH55 119 aa4.25□□□□□ -1.73
GARNL3-212ENST00000463005 A0A1B0GVX0 72 aa4.25□□□□□ -1.73
GARNL3-212ENST00000463005 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
GARNL3-212ENST00000463005 CXCL6P80162 114 aa4.25□□□□□ -1.73
GARNL3-212ENST00000463005 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
GARNL3-212ENST00000463005 HIST1H4AP62805 103 aaKnown RBP4.24□□□□□ -1.73
GARNL3-212ENST00000463005 K7EQZ3 153 aa4.23□□□□□ -1.73
GARNL3-212ENST00000463005 DSCR10P59022 87 aa4.23□□□□□ -1.73
GARNL3-212ENST00000463005 LINC00313P59037 77 aa4.23□□□□□ -1.73
GARNL3-212ENST00000463005 PRR15Q8IV56 129 aa4.22□□□□□ -1.73
GARNL3-212ENST00000463005 Q8N9L7 120 aa4.22□□□□□ -1.73
GARNL3-212ENST00000463005 RPL37P61927 97 aaKnown RBP4.21□□□□□ -1.74
GARNL3-212ENST00000463005 C8orf17Q9NRJ1 99 aa4.21□□□□□ -1.74
GARNL3-212ENST00000463005 WFDC13Q8IUB5 93 aa4.2□□□□□ -1.74
GARNL3-212ENST00000463005 hDV103S1A0JD37 113 aa4.19□□□□□ -1.74
GARNL3-212ENST00000463005 HCG22E2RYF7 251 aa4.19□□□□□ -1.74
GARNL3-212ENST00000463005 NDUFS5O43920 106 aa4.19□□□□□ -1.74
GARNL3-212ENST00000463005 SEC61GP60059 68 aa4.19□□□□□ -1.74
GARNL3-212ENST00000463005 CASC2Q6XLA1 102 aa4.19□□□□□ -1.74
GARNL3-212ENST00000463005 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
GARNL3-212ENST00000463005 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
GARNL3-212ENST00000463005 MMP24-AS1A0A0U1RRL7 71 aa4.17□□□□□ -1.74
GARNL3-212ENST00000463005 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
GARNL3-212ENST00000463005 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
GARNL3-212ENST00000463005 MRPL34Q9BQ48 92 aaKnown RBP4.16□□□□□ -1.74
GARNL3-212ENST00000463005 A0A087WVE0 104 aa4.15□□□□□ -1.75
GARNL3-212ENST00000463005 SCGB1A1P11684 91 aa4.15□□□□□ -1.75
GARNL3-212ENST00000463005 IMUPQ9GZP8 106 aa4.15□□□□□ -1.75
GARNL3-212ENST00000463005 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
GARNL3-212ENST00000463005 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
GARNL3-212ENST00000463005 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
GARNL3-212ENST00000463005 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms