RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SNCGO76070 127 aa3.16□□□□□ -1.9
VPS36-202ENST00000462289 TCL1BO95988 128 aa3.16□□□□□ -1.9
VPS36-202ENST00000462289 OBSCN-AS1Q96MR7 158 aa3.16□□□□□ -1.9
VPS36-202ENST00000462289 ORMDL1Q9P0S3 153 aa3.16□□□□□ -1.9
VPS36-202ENST00000462289 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
VPS36-202ENST00000462289 RNF213Q63HN8 5207 aa3.16□□□□□ -1.9
VPS36-202ENST00000462289 TRBV20-1A0A075B6N2 111 aa3.15□□□□□ -1.91
VPS36-202ENST00000462289 A0A1W2PNM2 257 aa3.15□□□□□ -1.91
VPS36-202ENST00000462289 F8WEM9 126 aa3.15□□□□□ -1.91
VPS36-202ENST00000462289 PSMB2P49721 201 aa3.15□□□□□ -1.91
VPS36-202ENST00000462289 PRR4Q16378 134 aa3.15□□□□□ -1.91
VPS36-202ENST00000462289 TEN1Q86WV5 123 aa3.15□□□□□ -1.91
VPS36-202ENST00000462289 H3BMG7 143 aa3.14□□□□□ -1.91
VPS36-202ENST00000462289 H3BUT2 72 aa3.14□□□□□ -1.91
VPS36-202ENST00000462289 Q96NJ1 140 aa3.14□□□□□ -1.91
VPS36-202ENST00000462289 A0A1W2PPM0 123 aa3.13□□□□□ -1.91
VPS36-202ENST00000462289 DNAL4O96015 105 aa3.13□□□□□ -1.91
VPS36-202ENST00000462289 ATXN8Q156A1 80 aa3.13□□□□□ -1.91
VPS36-202ENST00000462289 LOC110117498A0A087WWA1 95 aa3.12□□□□□ -1.91
VPS36-202ENST00000462289 BAALC-AS2P0C853 105 aa3.12□□□□□ -1.91
VPS36-202ENST00000462289 LYRM7Q5U5X0 104 aa3.12□□□□□ -1.91
VPS36-202ENST00000462289 NAA38Q9BRA0 125 aaKnown RBP3.12□□□□□ -1.91
VPS36-202ENST00000462289 A0A1B0GW54 56 aa3.11□□□□□ -1.91
VPS36-202ENST00000462289 SCGB1C2P0DMR2 95 aa3.11□□□□□ -1.91
VPS36-202ENST00000462289 FABP2P12104 132 aa3.11□□□□□ -1.91
VPS36-202ENST00000462289 HRCT1Q6UXD1 115 aa3.11□□□□□ -1.91
VPS36-202ENST00000462289 ANKRD29Q8N6D5 301 aa3.11□□□□□ -1.91
VPS36-202ENST00000462289 LINC00472Q9H8W2 130 aa3.11□□□□□ -1.91
VPS36-202ENST00000462289 PRO0461Q9UI25 63 aa3.11□□□□□ -1.91
VPS36-202ENST00000462289 H3BT86 120 aa3.1□□□□□ -1.91
VPS36-202ENST00000462289 RBM3P98179 157 aaKnown RBP3.1□□□□□ -1.91
VPS36-202ENST00000462289 COL5A1-AS1Q5SY13 56 aa3.1□□□□□ -1.91
VPS36-202ENST00000462289 Q6ZQT0 140 aa3.1□□□□□ -1.91
VPS36-202ENST00000462289 SS18L2Q9UHA2 77 aa3.1□□□□□ -1.91
VPS36-202ENST00000462289 A0A087WSZ3 146 aa3.09□□□□□ -1.91
VPS36-202ENST00000462289 JMJD7-PLA2G4BH0Y9G9 81 aa3.09□□□□□ -1.91
VPS36-202ENST00000462289 BATFQ16520 125 aa3.09□□□□□ -1.91
VPS36-202ENST00000462289 C9JAW5 83 aa3.08□□□□□ -1.92
VPS36-202ENST00000462289 CCKP06307 115 aa3.08□□□□□ -1.92
VPS36-202ENST00000462289 PDE6GP18545 87 aa3.08□□□□□ -1.92
VPS36-202ENST00000462289 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
VPS36-202ENST00000462289 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
VPS36-202ENST00000462289 KRTAP16-1A8MUX0 517 aa3.06□□□□□ -1.92
VPS36-202ENST00000462289 K7EP34 96 aa3.06□□□□□ -1.92
VPS36-202ENST00000462289 SEC61BP60468 96 aaKnown RBP3.06□□□□□ -1.92
VPS36-202ENST00000462289 RPL37P61927 97 aaKnown RBP3.06□□□□□ -1.92
VPS36-202ENST00000462289 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
VPS36-202ENST00000462289 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
VPS36-202ENST00000462289 DSCR8Q96T75 97 aa3.06□□□□□ -1.92
VPS36-202ENST00000462289 SPCS1Q9Y6A9 102 aa3.06□□□□□ -1.92
VPS36-202ENST00000462289 A8MUU9 505 aa3.05□□□□□ -1.92
VPS36-202ENST00000462289 Q75L30 129 aa3.05□□□□□ -1.92
VPS36-202ENST00000462289 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
VPS36-202ENST00000462289 C14orf132Q9NPU4 83 aa3.04□□□□□ -1.92
VPS36-202ENST00000462289 A0A1B0GV72 72 aa3.02□□□□□ -1.93
VPS36-202ENST00000462289 C9orf92A6NGG3 77 aa3.02□□□□□ -1.93
VPS36-202ENST00000462289 J3KT08 172 aa3.02□□□□□ -1.93
VPS36-202ENST00000462289 NOTCH2NLQ7Z3S9 236 aa3.02□□□□□ -1.93
VPS36-202ENST00000462289 MTURNQ8N3F0 131 aa3.02□□□□□ -1.93
VPS36-202ENST00000462289 A0A1B0GVX0 72 aa3.01□□□□□ -1.93
VPS36-202ENST00000462289 PCP4L1A6NKN8 68 aa3.01□□□□□ -1.93
VPS36-202ENST00000462289 F8W1H4 67 aa3.01□□□□□ -1.93
VPS36-202ENST00000462289 PCOTHQ58A44 107 aa3.01□□□□□ -1.93
VPS36-202ENST00000462289 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
VPS36-202ENST00000462289 A8MWP4 228 aa3□□□□□ -1.93
VPS36-202ENST00000462289 C8orf87E5RJ46 101 aa3□□□□□ -1.93
VPS36-202ENST00000462289 IGKV4-1P06312 121 aa3□□□□□ -1.93
VPS36-202ENST00000462289 DSCR10P59022 87 aa3□□□□□ -1.93
VPS36-202ENST00000462289 GTF2H5Q6ZYL4 71 aa3□□□□□ -1.93
VPS36-202ENST00000462289 IGKV3D-7A0A0C4DH55 119 aa2.99□□□□□ -1.93
VPS36-202ENST00000462289 LINC00313P59037 77 aa2.99□□□□□ -1.93
VPS36-202ENST00000462289 DEFB116Q30KQ4 102 aa2.98□□□□□ -1.93
VPS36-202ENST00000462289 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
VPS36-202ENST00000462289 PRR15Q8IV56 129 aa2.98□□□□□ -1.93
VPS36-202ENST00000462289 SIGMAR1Q99720 223 aa2.98□□□□□ -1.93
VPS36-202ENST00000462289 VPS25Q9BRG1 176 aa2.98□□□□□ -1.93
VPS36-202ENST00000462289 ETDBQ3ZM63 59 aa2.97□□□□□ -1.93
VPS36-202ENST00000462289 Q6ZVQ6 151 aa2.97□□□□□ -1.93
VPS36-202ENST00000462289 LINC00846Q9NV44 126 aa2.97□□□□□ -1.93
VPS36-202ENST00000462289 A0A0U1RQV1 116 aa2.96□□□□□ -1.94
VPS36-202ENST00000462289 MMP24-AS1A0A0U1RRL7 71 aa2.96□□□□□ -1.94
VPS36-202ENST00000462289 NREPQ16612 68 aa2.96□□□□□ -1.94
VPS36-202ENST00000462289 C8orf17Q9NRJ1 99 aa2.96□□□□□ -1.94
VPS36-202ENST00000462289 IGHV6-1A0A0B4J1U7 121 aa2.95□□□□□ -1.94
VPS36-202ENST00000462289 FAM240AA0A1B0GVK7 77 aa2.95□□□□□ -1.94
VPS36-202ENST00000462289 K7EQZ3 153 aa2.94□□□□□ -1.94
VPS36-202ENST00000462289 NDUFB1O75438 58 aa2.94□□□□□ -1.94
VPS36-202ENST00000462289 ATP11AUNQ6ZP68 121 aa2.94□□□□□ -1.94
VPS36-202ENST00000462289 MT1HP80294 61 aa2.93□□□□□ -1.94
VPS36-202ENST00000462289 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
VPS36-202ENST00000462289 A0A1B0GV90 55 aa2.92□□□□□ -1.94
VPS36-202ENST00000462289 BPY2O14599 106 aa2.92□□□□□ -1.94
VPS36-202ENST00000462289 ACYP1P07311 99 aa2.92□□□□□ -1.94
VPS36-202ENST00000462289 HRES1P13985 223 aa2.92□□□□□ -1.94
VPS36-202ENST00000462289 CXCL6P80162 114 aa2.92□□□□□ -1.94
VPS36-202ENST00000462289 ZCCHC13Q8WW36 166 aaKnown RBP2.92□□□□□ -1.94
VPS36-202ENST00000462289 MRPL34Q9BQ48 92 aaKnown RBP2.91□□□□□ -1.94
VPS36-202ENST00000462289 UBL5Q9BZL1 73 aa2.91□□□□□ -1.94
VPS36-202ENST00000462289 hDV103S1A0JD37 113 aa2.9□□□□□ -1.95
VPS36-202ENST00000462289 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms