RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SPANXDQ9BXN6 97 aa2.13□□□□□ -2.07
COPS3-204ENST00000462236 SPANXCQ9NY87 97 aa2.13□□□□□ -2.07
COPS3-204ENST00000462236 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
COPS3-204ENST00000462236 J3QQQ9 107 aa2.12□□□□□ -2.07
COPS3-204ENST00000462236 NPC2P61916 151 aa2.12□□□□□ -2.07
COPS3-204ENST00000462236 FABP9Q0Z7S8 132 aa2.12□□□□□ -2.07
COPS3-204ENST00000462236 Q6JHZ5 121 aa2.12□□□□□ -2.07
COPS3-204ENST00000462236 CLEC2BQ92478 149 aa2.12□□□□□ -2.07
COPS3-204ENST00000462236 FAM240AA0A1B0GVK7 77 aa2.11□□□□□ -2.07
COPS3-204ENST00000462236 LST1O00453 97 aa2.11□□□□□ -2.07
COPS3-204ENST00000462236 KRTAP19-8Q3LI54 63 aa2.11□□□□□ -2.07
COPS3-204ENST00000462236 LINC00308Q8TCZ7 52 aa2.11□□□□□ -2.07
COPS3-204ENST00000462236 SEC11CQ9BY50 192 aa2.11□□□□□ -2.07
COPS3-204ENST00000462236 SPRR2EP22531 72 aa2.1□□□□□ -2.07
COPS3-204ENST00000462236 SPRR2BP35325 72 aa2.1□□□□□ -2.07
COPS3-204ENST00000462236 SPRR2AP35326 72 aa2.1□□□□□ -2.07
COPS3-204ENST00000462236 ADM2Q7Z4H4 148 aa2.1□□□□□ -2.07
COPS3-204ENST00000462236 OR13C6PQ8NH95 151 aa2.1□□□□□ -2.07
COPS3-204ENST00000462236 TIMM17BO60830 172 aa2.09□□□□□ -2.07
COPS3-204ENST00000462236 VAMP3Q15836 100 aa2.09□□□□□ -2.07
COPS3-204ENST00000462236 ZNF815PA8K554 130 aa2.08□□□□□ -2.08
COPS3-204ENST00000462236 OCIAD2Q56VL3 154 aa2.08□□□□□ -2.08
COPS3-204ENST00000462236 CHCHD1Q96BP2 118 aaKnown RBP2.08□□□□□ -2.08
COPS3-204ENST00000462236 TRAPPC1Q9Y5R8 145 aa2.08□□□□□ -2.08
COPS3-204ENST00000462236 R4GN34 69 aa2.08□□□□□ -2.08
COPS3-204ENST00000462236 V9GYY9 64 aa2.08□□□□□ -2.08
COPS3-204ENST00000462236 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
COPS3-204ENST00000462236 TRAV13-2A0A0B4J235 113 aa2.07□□□□□ -2.08
COPS3-204ENST00000462236 F8WEM9 126 aa2.07□□□□□ -2.08
COPS3-204ENST00000462236 PLNP26678 52 aa2.07□□□□□ -2.08
COPS3-204ENST00000462236 SPRR2FQ96RM1 72 aa2.07□□□□□ -2.08
COPS3-204ENST00000462236 S100PP25815 95 aa2.06□□□□□ -2.08
COPS3-204ENST00000462236 LINC00313P59037 77 aa2.06□□□□□ -2.08
COPS3-204ENST00000462236 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
COPS3-204ENST00000462236 NHP2Q9NX24 153 aaKnown RBP2.06□□□□□ -2.08
COPS3-204ENST00000462236 SS18L2Q9UHA2 77 aa2.06□□□□□ -2.08
COPS3-204ENST00000462236 H3BQ85 93 aa2.05□□□□□ -2.08
COPS3-204ENST00000462236 DPM2O94777 84 aa2.05□□□□□ -2.08
COPS3-204ENST00000462236 IGKCP01834 107 aa2.05□□□□□ -2.08
COPS3-204ENST00000462236 Q5VV11 94 aa2.05□□□□□ -2.08
COPS3-204ENST00000462236 LINC00575Q6W349 94 aa2.05□□□□□ -2.08
COPS3-204ENST00000462236 Q6ZQY7 126 aa2.05□□□□□ -2.08
COPS3-204ENST00000462236 YPEL4Q96NS1 127 aa2.05□□□□□ -2.08
COPS3-204ENST00000462236 A0A1W2PNM2 257 aa2.04□□□□□ -2.08
COPS3-204ENST00000462236 TMEM218A2RU14 115 aa2.04□□□□□ -2.08
COPS3-204ENST00000462236 SPINK7P58062 85 aa2.04□□□□□ -2.08
COPS3-204ENST00000462236 TEN1Q86WV5 123 aa2.04□□□□□ -2.08
COPS3-204ENST00000462236 SMIM11BQ8TCY0 68 aa2.04□□□□□ -2.08
COPS3-204ENST00000462236 PPDPFLQ8WWR9 84 aa2.04□□□□□ -2.08
COPS3-204ENST00000462236 H3BUT2 72 aa2.03□□□□□ -2.08
COPS3-204ENST00000462236 K7ERS5 55 aa2.03□□□□□ -2.08
COPS3-204ENST00000462236 SPRR2DP22532 72 aa2.03□□□□□ -2.08
COPS3-204ENST00000462236 ZCCHC13Q8WW36 166 aaKnown RBP2.03□□□□□ -2.08
COPS3-204ENST00000462236 PMCHL2Q9BQD1 86 aa2.03□□□□□ -2.08
COPS3-204ENST00000462236 A0A087WSZ3 146 aa2.02□□□□□ -2.09
COPS3-204ENST00000462236 hADV29S1A0JD25 119 aa2.02□□□□□ -2.09
COPS3-204ENST00000462236 LEPROTL1O95214 131 aa2.02□□□□□ -2.09
COPS3-204ENST00000462236 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.02□□□□□ -2.09
COPS3-204ENST00000462236 TTTY13Q9BZ97 58 aa2.02□□□□□ -2.09
COPS3-204ENST00000462236 IFITM1P13164 125 aa2.01□□□□□ -2.09
COPS3-204ENST00000462236 H1FX-AS1Q4G0G2 97 aa2.01□□□□□ -2.09
COPS3-204ENST00000462236 WFDC13Q8IUB5 93 aa2.01□□□□□ -2.09
COPS3-204ENST00000462236 SCGB1C2P0DMR2 95 aa2□□□□□ -2.09
COPS3-204ENST00000462236 CLLU1Q5K131 121 aa2□□□□□ -2.09
COPS3-204ENST00000462236 SIGMAR1Q99720 223 aa2□□□□□ -2.09
COPS3-204ENST00000462236 LINC00472Q9H8W2 130 aa2□□□□□ -2.09
COPS3-204ENST00000462236 HSPB8Q9UJY1 196 aa2□□□□□ -2.09
COPS3-204ENST00000462236 MUSTN1Q8IVN3 82 aa1.99□□□□□ -2.09
COPS3-204ENST00000462236 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
COPS3-204ENST00000462236 LINC01545Q5VT33 79 aa1.98□□□□□ -2.09
COPS3-204ENST00000462236 COPS9Q8WXC6 57 aa1.98□□□□□ -2.09
COPS3-204ENST00000462236 SNHG12Q9BXW3 62 aa1.98□□□□□ -2.09
COPS3-204ENST00000462236 C8orf87E5RJ46 101 aa1.97□□□□□ -2.09
COPS3-204ENST00000462236 FABP4P15090 132 aa1.97□□□□□ -2.09
COPS3-204ENST00000462236 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
COPS3-204ENST00000462236 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
COPS3-204ENST00000462236 RAB37Q96AX2 223 aa1.97□□□□□ -2.09
COPS3-204ENST00000462236 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
COPS3-204ENST00000462236 SYS1-DBNDD2H3BUS1 97 aa1.96□□□□□ -2.1
COPS3-204ENST00000462236 TRBV7-4A0A0J9YYF1 115 aa1.95□□□□□ -2.1
COPS3-204ENST00000462236 A0A1B0GU33 70 aa1.95□□□□□ -2.1
COPS3-204ENST00000462236 C3orf79P0CE67 100 aa1.95□□□□□ -2.1
COPS3-204ENST00000462236 ANAPC13Q9BS18 74 aa1.95□□□□□ -2.1
COPS3-204ENST00000462236 TRGC2P03986 189 aa1.94□□□□□ -2.1
COPS3-204ENST00000462236 MT1XP80297 61 aa1.94□□□□□ -2.1
COPS3-204ENST00000462236 SCGB1D4Q6XE38 83 aa1.94□□□□□ -2.1
COPS3-204ENST00000462236 A0A0B4J2C4 111 aa1.93□□□□□ -2.1
COPS3-204ENST00000462236 FAM236AA0A1B0GUQ0 79 aa1.93□□□□□ -2.1
COPS3-204ENST00000462236 FAM236BA0A1B0GV22 79 aa1.93□□□□□ -2.1
COPS3-204ENST00000462236 H3BMG7 143 aa1.93□□□□□ -2.1
COPS3-204ENST00000462236 KLKP1Q107X0 134 aa1.93□□□□□ -2.1
COPS3-204ENST00000462236 BVES-AS1Q5T3Y7 98 aa1.93□□□□□ -2.1
COPS3-204ENST00000462236 IGKV3D-7A0A0C4DH55 119 aa1.92□□□□□ -2.1
COPS3-204ENST00000462236 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
COPS3-204ENST00000462236 C12orf57Q99622 126 aa1.92□□□□□ -2.1
COPS3-204ENST00000462236 IMUPQ9GZP8 106 aa1.91□□□□□ -2.1
COPS3-204ENST00000462236 APOC3P02656 99 aa1.9□□□□□ -2.11
COPS3-204ENST00000462236 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
COPS3-204ENST00000462236 A0A1B0GX51 115 aa1.89□□□□□ -2.11
COPS3-204ENST00000462236 SVBPQ8N300 66 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms