RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PSORS1C2Q9UIG4 136 aa10.98□□□□□ -0.65
HPS3-204ENST00000462030 LINC01558Q9Y6Z2 57 aa10.98□□□□□ -0.65
HPS3-204ENST00000462030 PLAC8Q9NZF1 115 aa10.97□□□□□ -0.65
HPS3-204ENST00000462030 ZNF706Q9Y5V0 76 aaPredicted RBP10.97□□□□□ -0.65
HPS3-204ENST00000462030 IGLV5-52A0A0A0MRZ9 124 aa10.94□□□□□ -0.66
HPS3-204ENST00000462030 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
HPS3-204ENST00000462030 HECTD4Q9Y4D8 3996 aa10.93□□□□□ -0.66
HPS3-204ENST00000462030 CDC42SE1Q9NRR8 79 aa10.92□□□□□ -0.66
HPS3-204ENST00000462030 A0A087WTM6 91 aa10.91□□□□□ -0.66
HPS3-204ENST00000462030 SPINK6Q6UWN8 80 aa10.91□□□□□ -0.66
HPS3-204ENST00000462030 Q5W150 140 aa10.9□□□□□ -0.66
HPS3-204ENST00000462030 STARD9Q9P2P6 4700 aa10.9□□□□□ -0.67
HPS3-204ENST00000462030 ZNF861PO60384 105 aa10.9□□□□□ -0.67
HPS3-204ENST00000462030 VPS13DQ5THJ4 4388 aa10.89□□□□□ -0.67
HPS3-204ENST00000462030 KTN1-AS1Q86SY8 53 aa10.89□□□□□ -0.67
HPS3-204ENST00000462030 RTL8CO15255 209 aa10.88□□□□□ -0.67
HPS3-204ENST00000462030 SPINK7P58062 85 aa10.87□□□□□ -0.67
HPS3-204ENST00000462030 NUPR2A6NF83 97 aa10.86□□□□□ -0.67
HPS3-204ENST00000462030 A6NN06 94 aa10.86□□□□□ -0.67
HPS3-204ENST00000462030 KRTAP13-3Q3SY46 172 aa10.85□□□□□ -0.67
HPS3-204ENST00000462030 PRR26Q8N8Z3 221 aa10.84□□□□□ -0.67
HPS3-204ENST00000462030 DNAH17Q9UFH2 4485 aa10.84□□□□□ -0.67
HPS3-204ENST00000462030 DNAH2Q9P225 4427 aa10.81□□□□□ -0.68
HPS3-204ENST00000462030 CIRBP-AS1Q8TBR5 109 aa10.8□□□□□ -0.68
HPS3-204ENST00000462030 KMT2AQ03164 3969 aa10.78□□□□□ -0.68
HPS3-204ENST00000462030 ALMS1Q8TCU4 4167 aa10.76□□□□□ -0.69
HPS3-204ENST00000462030 PRKDCP78527 4128 aaKnown RBP10.75□□□□□ -0.69
HPS3-204ENST00000462030 IGLV7-43P04211 117 aa10.74□□□□□ -0.69
HPS3-204ENST00000462030 FBN3Q75N90 2809 aa10.73□□□□□ -0.69
HPS3-204ENST00000462030 RBM12B-AS1Q9P1G2 102 aa10.73□□□□□ -0.69
HPS3-204ENST00000462030 ACYP2P14621 99 aa10.71□□□□□ -0.69
HPS3-204ENST00000462030 RETNLBQ9BQ08 111 aa10.69□□□□□ -0.7
HPS3-204ENST00000462030 C8orf87E5RJ46 101 aa10.68□□□□□ -0.7
HPS3-204ENST00000462030 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
HPS3-204ENST00000462030 DMAC1Q96GE9 116 aa10.66□□□□□ -0.7
HPS3-204ENST00000462030 MEGF8Q7Z7M0 2845 aa10.64□□□□□ -0.71
HPS3-204ENST00000462030 LINC00313P59037 77 aa10.63□□□□□ -0.71
HPS3-204ENST00000462030 SSBP3-AS1Q7Z2R9 100 aa10.63□□□□□ -0.71
HPS3-204ENST00000462030 DNAH11Q96DT5 4516 aa10.63□□□□□ -0.71
HPS3-204ENST00000462030 TGP01266 2768 aa10.62□□□□□ -0.71
HPS3-204ENST00000462030 DNAH6Q9C0G6 4158 aa10.61□□□□□ -0.71
HPS3-204ENST00000462030 FAM229AH3BQW9 127 aa10.6□□□□□ -0.71
HPS3-204ENST00000462030 IGKV2-30P06310 120 aa10.58□□□□□ -0.72
HPS3-204ENST00000462030 C1orf134Q5TEV5 83 aa10.57□□□□□ -0.72
HPS3-204ENST00000462030 DNAH5Q8TE73 4624 aa10.56□□□□□ -0.72
HPS3-204ENST00000462030 KRTAP13-2Q52LG2 175 aa10.55□□□□□ -0.72
HPS3-204ENST00000462030 A0A1B0GU69 56 aa10.53□□□□□ -0.72
HPS3-204ENST00000462030 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
HPS3-204ENST00000462030 KRTAP10-2P60368 255 aa10.48□□□□□ -0.73
HPS3-204ENST00000462030 IGKV2D-30A0A075B6S6 120 aa10.45□□□□□ -0.74
HPS3-204ENST00000462030 PRAC1Q96KF2 57 aa10.44□□□□□ -0.74
HPS3-204ENST00000462030 LRP1BQ9NZR2 4599 aa10.43□□□□□ -0.74
HPS3-204ENST00000462030 SPATA8Q6RVD6 105 aa10.43□□□□□ -0.74
HPS3-204ENST00000462030 LY6G6CO95867 125 aa10.43□□□□□ -0.74
HPS3-204ENST00000462030 ADM2Q7Z4H4 148 aa10.42□□□□□ -0.74
HPS3-204ENST00000462030 MIR22HGQ0VDD5 57 aa10.38□□□□□ -0.75
HPS3-204ENST00000462030 DNHD1Q96M86 4753 aa10.37□□□□□ -0.75
HPS3-204ENST00000462030 KRTAP1-4P0C5Y4 121 aa10.36□□□□□ -0.75
HPS3-204ENST00000462030 UQCR11O14957 56 aa10.36□□□□□ -0.75
HPS3-204ENST00000462030 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
HPS3-204ENST00000462030 KRTAP10-1P60331 282 aa10.33□□□□□ -0.76
HPS3-204ENST00000462030 PKD1P98161 4303 aa10.31□□□□□ -0.76
HPS3-204ENST00000462030 Q6ZSA8 131 aa10.31□□□□□ -0.76
HPS3-204ENST00000462030 VPS13BQ7Z7G8 4022 aa10.3□□□□□ -0.76
HPS3-204ENST00000462030 SPINK1P00995 79 aa10.26□□□□□ -0.77
HPS3-204ENST00000462030 Q8N1X5 172 aa10.25□□□□□ -0.77
HPS3-204ENST00000462030 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
HPS3-204ENST00000462030 FAT2Q9NYQ8 4349 aa10.23□□□□□ -0.77
HPS3-204ENST00000462030 TYMSOSQ8TAI1 123 aa10.22□□□□□ -0.77
HPS3-204ENST00000462030 HYDINQ4G0P3 5121 aa10.22□□□□□ -0.77
HPS3-204ENST00000462030 LINC01554Q52M75 96 aa10.12□□□□□ -0.79
HPS3-204ENST00000462030 CSAG1Q6PB30 78 aa10.08□□□□□ -0.8
HPS3-204ENST00000462030 LINC00304Q8N9R0 145 aa10.06□□□□□ -0.8
HPS3-204ENST00000462030 H0YAA0 97 aa10.02□□□□□ -0.81
HPS3-204ENST00000462030 SACSQ9NZJ4 4579 aa10.01□□□□□ -0.81
HPS3-204ENST00000462030 C9orf92A6NGG3 77 aa10□□□□□ -0.81
HPS3-204ENST00000462030 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
HPS3-204ENST00000462030 RPS29P62273 56 aaKnown RBP9.98□□□□□ -0.81
HPS3-204ENST00000462030 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
HPS3-204ENST00000462030 A8MUU9 505 aa9.94□□□□□ -0.82
HPS3-204ENST00000462030 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
HPS3-204ENST00000462030 A0A1B0GU33 70 aa9.89□□□□□ -0.83
HPS3-204ENST00000462030 SMR3BP02814 79 aaPredicted RBP9.88□□□□□ -0.83
HPS3-204ENST00000462030 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
HPS3-204ENST00000462030 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
HPS3-204ENST00000462030 DYNC1H1Q14204 4646 aaKnown RBP9.83□□□□□ -0.84
HPS3-204ENST00000462030 FAT1Q14517 4588 aa9.82□□□□□ -0.84
HPS3-204ENST00000462030 APOBP04114 4563 aaKnown RBP9.79□□□□□ -0.84
HPS3-204ENST00000462030 KRTAP25-1Q3LHN0 102 aa9.75□□□□□ -0.85
HPS3-204ENST00000462030 COX6B2Q6YFQ2 88 aa9.72□□□□□ -0.85
HPS3-204ENST00000462030 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.85
HPS3-204ENST00000462030 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
HPS3-204ENST00000462030 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
HPS3-204ENST00000462030 H3BS24 57 aa9.61□□□□□ -0.87
HPS3-204ENST00000462030 K7ERS5 55 aa9.59□□□□□ -0.87
HPS3-204ENST00000462030 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
HPS3-204ENST00000462030 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
HPS3-204ENST00000462030 KRTAP10-6P60371 365 aaPredicted RBP9.53□□□□□ -0.88
HPS3-204ENST00000462030 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
HPS3-204ENST00000462030 ROMO1P60602 79 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms