RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.55
LINC01140-201ENST00000461990 A0A096LNI7 61 aa5.38□□□□□ -1.55
LINC01140-201ENST00000461990 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
LINC01140-201ENST00000461990 KRTAP13-1Q8IUC0 172 aa5.38□□□□□ -1.55
LINC01140-201ENST00000461990 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
LINC01140-201ENST00000461990 KRTAP24-1Q3LI83 254 aa5.37□□□□□ -1.55
LINC01140-201ENST00000461990 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
LINC01140-201ENST00000461990 ANK2Q01484 3957 aa5.35□□□□□ -1.55
LINC01140-201ENST00000461990 TENM1Q9UKZ4 2725 aa5.35□□□□□ -1.55
LINC01140-201ENST00000461990 LY6G6CO95867 125 aa5.34□□□□□ -1.55
LINC01140-201ENST00000461990 KRTAP10-3P60369 221 aa5.34□□□□□ -1.55
LINC01140-201ENST00000461990 FAM229AH3BQW9 127 aa5.33□□□□□ -1.56
LINC01140-201ENST00000461990 H0YAA0 97 aa5.32□□□□□ -1.56
LINC01140-201ENST00000461990 NOTCH1P46531 2555 aa5.31□□□□□ -1.56
LINC01140-201ENST00000461990 NBEAL1Q6ZS30 2694 aa5.3□□□□□ -1.56
LINC01140-201ENST00000461990 PKD1L1Q8TDX9 2849 aa5.3□□□□□ -1.56
LINC01140-201ENST00000461990 IGLV9-49A0A0B4J1Y8 123 aa5.3□□□□□ -1.56
LINC01140-201ENST00000461990 TRRAPQ9Y4A5 3859 aa5.29□□□□□ -1.56
LINC01140-201ENST00000461990 FBN1P35555 2871 aaKnown RBP5.29□□□□□ -1.56
LINC01140-201ENST00000461990 Q6ZSA8 131 aa5.29□□□□□ -1.56
LINC01140-201ENST00000461990 PANO1I0J062 215 aa5.28□□□□□ -1.56
LINC01140-201ENST00000461990 DNHD1Q96M86 4753 aa5.28□□□□□ -1.56
LINC01140-201ENST00000461990 CSMD3Q7Z407 3707 aa5.27□□□□□ -1.57
LINC01140-201ENST00000461990 IGKV2D-30A0A075B6S6 120 aa5.27□□□□□ -1.57
LINC01140-201ENST00000461990 WWC2-AS2Q96NR7 200 aa5.27□□□□□ -1.57
LINC01140-201ENST00000461990 STAB1Q9NY15 2570 aa5.27□□□□□ -1.57
LINC01140-201ENST00000461990 NUPR2A6NF83 97 aa5.26□□□□□ -1.57
LINC01140-201ENST00000461990 COL6A5A8TX70 2615 aa5.25□□□□□ -1.57
LINC01140-201ENST00000461990 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
LINC01140-201ENST00000461990 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
LINC01140-201ENST00000461990 KRTAP16-1A8MUX0 517 aa5.24□□□□□ -1.57
LINC01140-201ENST00000461990 SRRM2Q9UQ35 2752 aaKnown RBP5.24□□□□□ -1.57
LINC01140-201ENST00000461990 A0A087WTM6 91 aa5.24□□□□□ -1.57
LINC01140-201ENST00000461990 ANAPC11Q9NYG5 84 aa5.23□□□□□ -1.57
LINC01140-201ENST00000461990 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
LINC01140-201ENST00000461990 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
LINC01140-201ENST00000461990 PSORS1C2Q9UIG4 136 aa5.2□□□□□ -1.58
LINC01140-201ENST00000461990 SEC61BP60468 96 aaKnown RBP5.19□□□□□ -1.58
LINC01140-201ENST00000461990 NDUFAF8A1L188 74 aa5.19□□□□□ -1.58
LINC01140-201ENST00000461990 C14orf177Q52M58 125 aa5.18□□□□□ -1.58
LINC01140-201ENST00000461990 A0A1B0GU33 70 aa5.18□□□□□ -1.58
LINC01140-201ENST00000461990 MGAM2Q2M2H8 2515 aa5.18□□□□□ -1.58
LINC01140-201ENST00000461990 TENM3Q9P273 2699 aa5.18□□□□□ -1.58
LINC01140-201ENST00000461990 SPINK6Q6UWN8 80 aa5.17□□□□□ -1.58
LINC01140-201ENST00000461990 H1FX-AS1Q4G0G2 97 aa5.17□□□□□ -1.58
LINC01140-201ENST00000461990 SSBP3-AS1Q7Z2R9 100 aa5.16□□□□□ -1.58
LINC01140-201ENST00000461990 K7ERS5 55 aa5.16□□□□□ -1.58
LINC01140-201ENST00000461990 SPINT4Q6UDR6 99 aa5.16□□□□□ -1.58
LINC01140-201ENST00000461990 CMYA5Q8N3K9 4069 aa5.15□□□□□ -1.58
LINC01140-201ENST00000461990 CRIPTQ9P021 101 aa5.14□□□□□ -1.59
LINC01140-201ENST00000461990 LYSTQ99698 3801 aa5.13□□□□□ -1.59
LINC01140-201ENST00000461990 TYMSOSQ8TAI1 123 aa5.12□□□□□ -1.59
LINC01140-201ENST00000461990 SPINK1P00995 79 aa5.11□□□□□ -1.59
LINC01140-201ENST00000461990 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
LINC01140-201ENST00000461990 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
LINC01140-201ENST00000461990 DNAH10Q8IVF4 4471 aa5.1□□□□□ -1.59
LINC01140-201ENST00000461990 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.59
LINC01140-201ENST00000461990 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.59
LINC01140-201ENST00000461990 DNAH3Q8TD57 4116 aa5.08□□□□□ -1.6
LINC01140-201ENST00000461990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.07□□□□□ -1.6
LINC01140-201ENST00000461990 LCE2AQ5TA79 106 aaPredicted RBP5.06□□□□□ -1.6
LINC01140-201ENST00000461990 KRTAP10-11P60412 298 aa5.05□□□□□ -1.6
LINC01140-201ENST00000461990 DNAH8Q96JB1 4490 aa5.05□□□□□ -1.6
LINC01140-201ENST00000461990 MEGF8Q7Z7M0 2845 aa5.04□□□□□ -1.6
LINC01140-201ENST00000461990 CIRBP-AS1Q8TBR5 109 aa5.04□□□□□ -1.6
LINC01140-201ENST00000461990 DNAH9Q9NYC9 4486 aa5.03□□□□□ -1.6
LINC01140-201ENST00000461990 Q8N1X5 172 aa5.03□□□□□ -1.6
LINC01140-201ENST00000461990 STAB2Q8WWQ8 2551 aa5.02□□□□□ -1.61
LINC01140-201ENST00000461990 COX6B2Q6YFQ2 88 aa5.01□□□□□ -1.61
LINC01140-201ENST00000461990 NBDYA0A0U1RRE5 68 aa5□□□□□ -1.61
LINC01140-201ENST00000461990 FLG2Q5D862 2391 aaPredicted RBP5□□□□□ -1.61
LINC01140-201ENST00000461990 RPL37P61927 97 aaKnown RBP4.99□□□□□ -1.61
LINC01140-201ENST00000461990 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
LINC01140-201ENST00000461990 PRKDCP78527 4128 aaKnown RBP4.97□□□□□ -1.61
LINC01140-201ENST00000461990 COL7A1Q02388 2944 aa4.96□□□□□ -1.62
LINC01140-201ENST00000461990 Q6ZRN7 208 aaPredicted RBP4.94□□□□□ -1.62
LINC01140-201ENST00000461990 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
LINC01140-201ENST00000461990 VPS13DQ5THJ4 4388 aa4.93□□□□□ -1.62
LINC01140-201ENST00000461990 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
LINC01140-201ENST00000461990 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
LINC01140-201ENST00000461990 DNAH17Q9UFH2 4485 aa4.92□□□□□ -1.62
LINC01140-201ENST00000461990 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
LINC01140-201ENST00000461990 APLNQ9ULZ1 77 aa4.88□□□□□ -1.63
LINC01140-201ENST00000461990 KRTAP13-2Q52LG2 175 aa4.87□□□□□ -1.63
LINC01140-201ENST00000461990 HUWE1Q7Z6Z7 4374 aaKnown RBP4.87□□□□□ -1.63
LINC01140-201ENST00000461990 DYNC2H1Q8NCM8 4307 aaKnown RBP4.85□□□□□ -1.63
LINC01140-201ENST00000461990 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
LINC01140-201ENST00000461990 DNAH7Q8WXX0 4024 aa4.85□□□□□ -1.63
LINC01140-201ENST00000461990 TGP01266 2768 aa4.84□□□□□ -1.63
LINC01140-201ENST00000461990 KRTAP13-4Q3LI77 160 aa4.83□□□□□ -1.64
LINC01140-201ENST00000461990 XP32Q5T750 250 aa4.81□□□□□ -1.64
LINC01140-201ENST00000461990 HECTD4Q9Y4D8 3996 aa4.81□□□□□ -1.64
LINC01140-201ENST00000461990 S4R3F8 94 aa4.79□□□□□ -1.64
LINC01140-201ENST00000461990 DNAH6Q9C0G6 4158 aa4.77□□□□□ -1.65
LINC01140-201ENST00000461990 A0A0D9SG42 100 aa4.75□□□□□ -1.65
LINC01140-201ENST00000461990 KMT2AQ03164 3969 aa4.75□□□□□ -1.65
LINC01140-201ENST00000461990 RPS29P62273 56 aaKnown RBP4.73□□□□□ -1.65
LINC01140-201ENST00000461990 KRTAP1-4P0C5Y4 121 aa4.73□□□□□ -1.65
LINC01140-201ENST00000461990 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
LINC01140-201ENST00000461990 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms