RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 H0YGG7 62 aa0.96□□□□□ -2.26
CCT4-203ENST00000461540 SMR3AQ99954 134 aa0.96□□□□□ -2.26
CCT4-203ENST00000461540 PRO0255Q9UI72 69 aa0.96□□□□□ -2.26
CCT4-203ENST00000461540 VWFP04275 2813 aa0.96□□□□□ -2.26
CCT4-203ENST00000461540 VPS13CQ709C8 3753 aa0.96□□□□□ -2.26
CCT4-203ENST00000461540 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
CCT4-203ENST00000461540 TENM3Q9P273 2699 aa0.95□□□□□ -2.26
CCT4-203ENST00000461540 ANK3Q12955 4377 aaKnown RBP0.95□□□□□ -2.26
CCT4-203ENST00000461540 TGP01266 2768 aa0.95□□□□□ -2.26
CCT4-203ENST00000461540 LINC00959A0A1B0GUT2 108 aa0.95□□□□□ -2.26
CCT4-203ENST00000461540 DEFB108AA8MXU0 73 aa0.95□□□□□ -2.26
CCT4-203ENST00000461540 DEFB112Q30KQ8 113 aa0.95□□□□□ -2.26
CCT4-203ENST00000461540 FXYD6-FXYD2A0A087WZ82 144 aa0.94□□□□□ -2.26
CCT4-203ENST00000461540 RPS27LQ71UM5 84 aaKnown RBP0.94□□□□□ -2.26
CCT4-203ENST00000461540 C18orf32Q8TCD1 76 aa0.94□□□□□ -2.26
CCT4-203ENST00000461540 SMCO4Q9NRQ5 59 aa0.94□□□□□ -2.26
CCT4-203ENST00000461540 COL7A1Q02388 2944 aa0.94□□□□□ -2.26
CCT4-203ENST00000461540 ANK2Q01484 3957 aa0.93□□□□□ -2.26
CCT4-203ENST00000461540 A0A087WXM4 84 aa0.93□□□□□ -2.26
CCT4-203ENST00000461540 SMIM13P0DJ93 91 aa0.93□□□□□ -2.26
CCT4-203ENST00000461540 Q8IZM0 81 aa0.93□□□□□ -2.26
CCT4-203ENST00000461540 PRKDCP78527 4128 aaKnown RBP0.93□□□□□ -2.26
CCT4-203ENST00000461540 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
CCT4-203ENST00000461540 NDUFB1O75438 58 aa0.92□□□□□ -2.26
CCT4-203ENST00000461540 DEFA5Q01523 94 aa0.92□□□□□ -2.26
CCT4-203ENST00000461540 USMG5Q96IX5 58 aa0.92□□□□□ -2.26
CCT4-203ENST00000461540 GAFA1Q96PS6 74 aa0.92□□□□□ -2.26
CCT4-203ENST00000461540 AHNAKQ09666 5890 aaKnown RBP0.92□□□□□ -2.26
CCT4-203ENST00000461540 DNHD1Q96M86 4753 aa0.91□□□□□ -2.26
CCT4-203ENST00000461540 I3L2K1 104 aa0.91□□□□□ -2.26
CCT4-203ENST00000461540 PDCD5O14737 125 aa0.91□□□□□ -2.26
CCT4-203ENST00000461540 IFI6P09912 130 aa0.91□□□□□ -2.26
CCT4-203ENST00000461540 COX6B1P14854 86 aa0.91□□□□□ -2.26
CCT4-203ENST00000461540 DEFB121Q5J5C9 76 aa0.91□□□□□ -2.26
CCT4-203ENST00000461540 ATP5EP2Q5VTU8 51 aa0.91□□□□□ -2.26
CCT4-203ENST00000461540 CMYA5Q8N3K9 4069 aa0.9□□□□□ -2.26
CCT4-203ENST00000461540 UMAD1C9J7I0 102 aa0.9□□□□□ -2.27
CCT4-203ENST00000461540 CFDP00746 253 aaPredicted RBP0.9□□□□□ -2.27
CCT4-203ENST00000461540 WFDC9Q8NEX5 89 aa0.9□□□□□ -2.27
CCT4-203ENST00000461540 CRIPTQ9P021 101 aa0.9□□□□□ -2.27
CCT4-203ENST00000461540 DNAH3Q8TD57 4116 aa0.9□□□□□ -2.27
CCT4-203ENST00000461540 TRRAPQ9Y4A5 3859 aa0.89□□□□□ -2.27
CCT4-203ENST00000461540 TNCP24821 2201 aa0.89□□□□□ -2.27
CCT4-203ENST00000461540 NBEAL2Q6ZNJ1 2754 aa0.89□□□□□ -2.27
CCT4-203ENST00000461540 TRAV21A0A0B4J279 112 aa0.89□□□□□ -2.27
CCT4-203ENST00000461540 RPL38P63173 70 aaKnown RBP0.89□□□□□ -2.27
CCT4-203ENST00000461540 PRB3Q04118 309 aaPredicted RBP0.89□□□□□ -2.27
CCT4-203ENST00000461540 CSMD3Q7Z407 3707 aa0.88□□□□□ -2.27
CCT4-203ENST00000461540 LYNX1G3V0Z9 82 aa0.88□□□□□ -2.27
CCT4-203ENST00000461540 DEFB108BQ8NET1 73 aa0.88□□□□□ -2.27
CCT4-203ENST00000461540 TENM2Q9NT68 2774 aa0.88□□□□□ -2.27
CCT4-203ENST00000461540 DYNC2H1Q8NCM8 4307 aaKnown RBP0.88□□□□□ -2.27
CCT4-203ENST00000461540 I3L3M4 83 aa0.87□□□□□ -2.27
CCT4-203ENST00000461540 COX8AP10176 69 aa0.87□□□□□ -2.27
CCT4-203ENST00000461540 COX7BP24311 80 aa0.87□□□□□ -2.27
CCT4-203ENST00000461540 IFI27P40305 119 aaPredicted RBP0.87□□□□□ -2.27
CCT4-203ENST00000461540 K7EQZ3 153 aa0.86□□□□□ -2.27
CCT4-203ENST00000461540 LINC01590Q5TEZ4 76 aa0.85□□□□□ -2.27
CCT4-203ENST00000461540 LYSTQ99698 3801 aa0.85□□□□□ -2.27
CCT4-203ENST00000461540 DNAH9Q9NYC9 4486 aa0.84□□□□□ -2.27
CCT4-203ENST00000461540 DNAH7Q8WXX0 4024 aa0.84□□□□□ -2.27
CCT4-203ENST00000461540 CPSF4LA6NMK7 179 aaKnown RBP0.84□□□□□ -2.27
CCT4-203ENST00000461540 MRPL33O75394 65 aaKnown RBP0.84□□□□□ -2.27
CCT4-203ENST00000461540 RPS27P42677 84 aaKnown RBP0.84□□□□□ -2.27
CCT4-203ENST00000461540 ALMS1Q8TCU4 4167 aa0.84□□□□□ -2.28
CCT4-203ENST00000461540 MACF1Q9UPN3 7388 aaKnown RBP0.84□□□□□ -2.28
CCT4-203ENST00000461540 KMT2CQ8NEZ4 4911 aaKnown RBP0.84□□□□□ -2.28
CCT4-203ENST00000461540 DNAH1Q9P2D7 4330 aa0.83□□□□□ -2.28
CCT4-203ENST00000461540 SPINK6Q6UWN8 80 aa0.83□□□□□ -2.28
CCT4-203ENST00000461540 HUWE1Q7Z6Z7 4374 aaKnown RBP0.82□□□□□ -2.28
CCT4-203ENST00000461540 RYR3Q15413 4870 aa0.82□□□□□ -2.28
CCT4-203ENST00000461540 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
CCT4-203ENST00000461540 STARD9Q9P2P6 4700 aa0.82□□□□□ -2.28
CCT4-203ENST00000461540 H3BVH4 76 aa0.82□□□□□ -2.28
CCT4-203ENST00000461540 TTTY10Q9BZA0 68 aa0.82□□□□□ -2.28
CCT4-203ENST00000461540 KAAG1Q9UBP8 84 aa0.82□□□□□ -2.28
CCT4-203ENST00000461540 SMIM31A0A1B0GVY4 71 aa0.81□□□□□ -2.28
CCT4-203ENST00000461540 H3BUX3 64 aa0.81□□□□□ -2.28
CCT4-203ENST00000461540 NREPQ16612 68 aa0.81□□□□□ -2.28
CCT4-203ENST00000461540 Q5VSD8 79 aa0.81□□□□□ -2.28
CCT4-203ENST00000461540 CMC2Q9NRP2 79 aa0.81□□□□□ -2.28
CCT4-203ENST00000461540 EPPK1P58107 5090 aaKnown RBP0.81□□□□□ -2.28
CCT4-203ENST00000461540 RYR2Q92736 4967 aa0.81□□□□□ -2.28
CCT4-203ENST00000461540 DNAH6Q9C0G6 4158 aa0.8□□□□□ -2.28
CCT4-203ENST00000461540 HECTD4Q9Y4D8 3996 aa0.8□□□□□ -2.28
CCT4-203ENST00000461540 M0R1W7 72 aa0.8□□□□□ -2.28
CCT4-203ENST00000461540 DEFB136Q30KP8 78 aa0.8□□□□□ -2.28
CCT4-203ENST00000461540 HEPN1Q6WQI6 88 aa0.8□□□□□ -2.28
CCT4-203ENST00000461540 PKD1P98161 4303 aa0.79□□□□□ -2.28
CCT4-203ENST00000461540 LCE6AA0A183 80 aa0.79□□□□□ -2.28
CCT4-203ENST00000461540 H3BSH0 61 aa0.79□□□□□ -2.28
CCT4-203ENST00000461540 SPRR1BP22528 89 aa0.79□□□□□ -2.28
CCT4-203ENST00000461540 LEAP2Q969E1 77 aa0.79□□□□□ -2.28
CCT4-203ENST00000461540 MRPL34Q9BQ48 92 aaKnown RBP0.79□□□□□ -2.28
CCT4-203ENST00000461540 FXYD6Q9H0Q3 95 aa0.79□□□□□ -2.28
CCT4-203ENST00000461540 SACSQ9NZJ4 4579 aa0.79□□□□□ -2.28
CCT4-203ENST00000461540 HYDINQ4G0P3 5121 aa0.78□□□□□ -2.28
CCT4-203ENST00000461540 NDUFA3O95167 84 aa0.78□□□□□ -2.28
CCT4-203ENST00000461540 SPRR1AP35321 89 aa0.78□□□□□ -2.28
CCT4-203ENST00000461540 KLK9Q2XQG4 91 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms