RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 FASNP49327 2511 aaKnown RBP0.14□□□□□ -2.39
SYPL1-203ENST00000460770 NF1P21359 2839 aa0.14□□□□□ -2.39
SYPL1-203ENST00000460770 RNF17Q9BXT8 1623 aaKnown RBP0.13□□□□□ -2.39
SYPL1-203ENST00000460770 COL7A1Q02388 2944 aa0.13□□□□□ -2.39
SYPL1-203ENST00000460770 BPTFQ12830 3046 aa0.13□□□□□ -2.39
SYPL1-203ENST00000460770 TFF3Q07654 80 aa0.13□□□□□ -2.39
SYPL1-203ENST00000460770 DEFB110Q30KQ9 67 aa0.13□□□□□ -2.39
SYPL1-203ENST00000460770 SMIM2Q9BVW6 85 aa0.13□□□□□ -2.39
SYPL1-203ENST00000460770 GLI2P10070 1586 aa0.13□□□□□ -2.39
SYPL1-203ENST00000460770 ALS2Q96Q42 1657 aa0.13□□□□□ -2.39
SYPL1-203ENST00000460770 DMXL1Q9Y485 3027 aa0.13□□□□□ -2.39
SYPL1-203ENST00000460770 TGP01266 2768 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 STAB1Q9NY15 2570 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 ANKHD1Q8IWZ3 2542 aaKnown RBP0.12□□□□□ -2.39
SYPL1-203ENST00000460770 HMCN2Q8NDA2 5059 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 TOMM5Q8N4H5 51 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 STAB2Q8WWQ8 2551 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 EFCAB6Q5THR3 1501 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 CLASP1Q7Z460 1538 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 NBPF19A0A087WUL8 3843 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 MYCBP2O75592 4640 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 ZZEF1O43149 2961 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 LPAP08519 4548 aa0.12□□□□□ -2.39
SYPL1-203ENST00000460770 HSPG2P98160 4391 aa0.11□□□□□ -2.39
SYPL1-203ENST00000460770 M0QY20 66 aa0.11□□□□□ -2.39
SYPL1-203ENST00000460770 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
SYPL1-203ENST00000460770 KIF1AQ12756 1690 aa0.11□□□□□ -2.39
SYPL1-203ENST00000460770 NBEAL2Q6ZNJ1 2754 aa0.11□□□□□ -2.39
SYPL1-203ENST00000460770 TACC2O95359 2948 aa0.1□□□□□ -2.39
SYPL1-203ENST00000460770 HECTD4Q9Y4D8 3996 aa0.1□□□□□ -2.39
SYPL1-203ENST00000460770 SRRM2Q9UQ35 2752 aaKnown RBP0.1□□□□□ -2.39
SYPL1-203ENST00000460770 ANKRD36CQ5JPF3 1778 aa0.1□□□□□ -2.39
SYPL1-203ENST00000460770 AGLP35573 1532 aa0.1□□□□□ -2.39
SYPL1-203ENST00000460770 A8MTW9 85 aa0.1□□□□□ -2.39
SYPL1-203ENST00000460770 TNP1P09430 55 aa0.1□□□□□ -2.39
SYPL1-203ENST00000460770 DEFB131AP59861 70 aa0.1□□□□□ -2.39
SYPL1-203ENST00000460770 LY75O60449 1722 aa0.1□□□□□ -2.39
SYPL1-203ENST00000460770 PKD1P98161 4303 aa0.09□□□□□ -2.39
SYPL1-203ENST00000460770 ADCY10Q96PN6 1610 aa0.09□□□□□ -2.39
SYPL1-203ENST00000460770 UTP20O75691 2785 aaKnown RBP0.09□□□□□ -2.39
SYPL1-203ENST00000460770 CROCC2H7BZ55 1655 aa0.09□□□□□ -2.39
SYPL1-203ENST00000460770 ITSN2Q9NZM3 1697 aa0.09□□□□□ -2.39
SYPL1-203ENST00000460770 LINC01546A6NGU7 62 aa0.09□□□□□ -2.4
SYPL1-203ENST00000460770 M0QZ58 72 aa0.09□□□□□ -2.4
SYPL1-203ENST00000460770 SPRR2AP35326 72 aa0.09□□□□□ -2.4
SYPL1-203ENST00000460770 WDR87Q6ZQQ6 2873 aa0.09□□□□□ -2.4
SYPL1-203ENST00000460770 TOGARAM1Q9Y4F4 1720 aa0.09□□□□□ -2.4
SYPL1-203ENST00000460770 DNAH9Q9NYC9 4486 aa0.09□□□□□ -2.4
SYPL1-203ENST00000460770 FANCD2Q9BXW9 1451 aa0.09□□□□□ -2.4
SYPL1-203ENST00000460770 NBEAL1Q6ZS30 2694 aa0.09□□□□□ -2.4
SYPL1-203ENST00000460770 COL6A3P12111 3177 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 LRP2P98164 4655 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 ZANQ9Y493 2812 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 MAST1Q9Y2H9 1570 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 CUBNO60494 3623 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 KRTAP6-2Q3LI66 62 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 VPS13BQ7Z7G8 4022 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 PREX2Q70Z35 1606 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 AKAP9Q99996 3911 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 TEP1Q99973 2627 aaKnown RBP0.08□□□□□ -2.4
SYPL1-203ENST00000460770 DNAH3Q8TD57 4116 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 DSTQ03001 7570 aaKnown RBP0.08□□□□□ -2.4
SYPL1-203ENST00000460770 SYCP2Q9BX26 1530 aa0.08□□□□□ -2.4
SYPL1-203ENST00000460770 SVEP1Q4LDE5 3571 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 NBEAQ8NFP9 2946 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 CDC42BPAQ5VT25 1732 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 HTTP42858 3142 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 ABCC8Q09428 1581 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 GCN1Q92616 2671 aaKnown RBP0.07□□□□□ -2.4
SYPL1-203ENST00000460770 MGAM2Q2M2H8 2515 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 SPART-AS1P0CW21 52 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 HERC1Q15751 4861 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 VPS13DQ5THJ4 4388 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 ACACBO00763 2458 aa0.07□□□□□ -2.4
SYPL1-203ENST00000460770 APOBP04114 4563 aaKnown RBP0.07□□□□□ -2.4
SYPL1-203ENST00000460770 SPTBN5Q9NRC6 3674 aaKnown RBP0.06□□□□□ -2.4
SYPL1-203ENST00000460770 HIVEP1P15822 2718 aa0.06□□□□□ -2.4
SYPL1-203ENST00000460770 CLPSL2Q6UWE3 100 aa0.06□□□□□ -2.4
SYPL1-203ENST00000460770 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
SYPL1-203ENST00000460770 MYO18BQ8IUG5 2567 aa0.06□□□□□ -2.4
SYPL1-203ENST00000460770 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
SYPL1-203ENST00000460770 NEBP20929 6669 aa0.06□□□□□ -2.4
SYPL1-203ENST00000460770 MUC2Q02817 5179 aa0.06□□□□□ -2.4
SYPL1-203ENST00000460770 SPENQ96T58 3664 aaKnown RBP0.06□□□□□ -2.4
SYPL1-203ENST00000460770 SACSQ9NZJ4 4579 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 PCLOQ9Y6V0 5065 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 A0A1B0GUL6 1792 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 NDUFA1O15239 70 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 MT1AP04731 61 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 SPRR2EP22531 72 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 PKHD1L1Q86WI1 4243 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 ANKRD11Q6UB99 2663 aaPredicted RBP0.05□□□□□ -2.4
SYPL1-203ENST00000460770 FAT1Q14517 4588 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 UBR4Q5T4S7 5183 aa0.05□□□□□ -2.4
SYPL1-203ENST00000460770 KMT2CQ8NEZ4 4911 aaKnown RBP0.05□□□□□ -2.4
SYPL1-203ENST00000460770 LAMA5O15230 3695 aa0.04□□□□□ -2.4
SYPL1-203ENST00000460770 POLR2KP53803 58 aaKnown RBP0.04□□□□□ -2.4
SYPL1-203ENST00000460770 DNAH6Q9C0G6 4158 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms