RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 A0A1W2PNM2 257 aa5.75□□□□□ -1.49
EPB41-208ENST00000460378 UQCR11O14957 56 aa5.74□□□□□ -1.49
EPB41-208ENST00000460378 C8orf17Q9NRJ1 99 aa5.74□□□□□ -1.49
EPB41-208ENST00000460378 DNHD1Q96M86 4753 aa5.73□□□□□ -1.49
EPB41-208ENST00000460378 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
EPB41-208ENST00000460378 CSMD2Q7Z408 3487 aa5.73□□□□□ -1.49
EPB41-208ENST00000460378 IGLV5-48A0A075B6I7 105 aa5.73□□□□□ -1.49
EPB41-208ENST00000460378 FAM104AQ969W3 186 aa5.72□□□□□ -1.49
EPB41-208ENST00000460378 MEGF8Q7Z7M0 2845 aa5.72□□□□□ -1.49
EPB41-208ENST00000460378 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.49
EPB41-208ENST00000460378 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.49
EPB41-208ENST00000460378 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
EPB41-208ENST00000460378 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
EPB41-208ENST00000460378 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
EPB41-208ENST00000460378 CYSTM1Q9H1C7 97 aa5.7□□□□□ -1.5
EPB41-208ENST00000460378 OCR1Q9BZK8 76 aa5.7□□□□□ -1.5
EPB41-208ENST00000460378 KRTAP13-2Q52LG2 175 aa5.69□□□□□ -1.5
EPB41-208ENST00000460378 LCA10Q71F78 164 aa5.66□□□□□ -1.5
EPB41-208ENST00000460378 KRTAP11-1Q8IUC1 163 aa5.66□□□□□ -1.5
EPB41-208ENST00000460378 SPANXA2-OT1Q8N9U9 137 aa5.65□□□□□ -1.5
EPB41-208ENST00000460378 Q5XG85 94 aa5.65□□□□□ -1.51
EPB41-208ENST00000460378 SPENQ96T58 3664 aaKnown RBP5.64□□□□□ -1.51
EPB41-208ENST00000460378 ZCCHC13Q8WW36 166 aaKnown RBP5.63□□□□□ -1.51
EPB41-208ENST00000460378 BSNQ9UPA5 3926 aa5.63□□□□□ -1.51
EPB41-208ENST00000460378 Q1T7F1 81 aa5.63□□□□□ -1.51
EPB41-208ENST00000460378 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
EPB41-208ENST00000460378 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
EPB41-208ENST00000460378 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
EPB41-208ENST00000460378 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
EPB41-208ENST00000460378 COL7A1Q02388 2944 aa5.61□□□□□ -1.51
EPB41-208ENST00000460378 AKAP9Q99996 3911 aa5.61□□□□□ -1.51
EPB41-208ENST00000460378 KRTAP13-1Q8IUC0 172 aa5.59□□□□□ -1.51
EPB41-208ENST00000460378 Q8NDZ9 215 aa5.59□□□□□ -1.51
EPB41-208ENST00000460378 SPINK7P58062 85 aa5.58□□□□□ -1.52
EPB41-208ENST00000460378 SRRM2Q9UQ35 2752 aaKnown RBP5.58□□□□□ -1.52
EPB41-208ENST00000460378 CRIPTQ9P021 101 aa5.56□□□□□ -1.52
EPB41-208ENST00000460378 Q75L30 129 aa5.56□□□□□ -1.52
EPB41-208ENST00000460378 KRTAP7-1Q8IUC3 87 aa5.56□□□□□ -1.52
EPB41-208ENST00000460378 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
EPB41-208ENST00000460378 C20orf166-AS1Q96NR2 134 aa5.55□□□□□ -1.52
EPB41-208ENST00000460378 TRRAPQ9Y4A5 3859 aa5.55□□□□□ -1.52
EPB41-208ENST00000460378 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
EPB41-208ENST00000460378 XP32Q5T750 250 aa5.52□□□□□ -1.53
EPB41-208ENST00000460378 ALMS1Q8TCU4 4167 aa5.52□□□□□ -1.53
EPB41-208ENST00000460378 ASB16-AS1Q495Z4 193 aa5.51□□□□□ -1.53
EPB41-208ENST00000460378 A0A0D9SG42 100 aa5.51□□□□□ -1.53
EPB41-208ENST00000460378 HRES1P13985 223 aa5.5□□□□□ -1.53
EPB41-208ENST00000460378 S4R3F8 94 aa5.5□□□□□ -1.53
EPB41-208ENST00000460378 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
EPB41-208ENST00000460378 Q5VV11 94 aa5.48□□□□□ -1.53
EPB41-208ENST00000460378 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
EPB41-208ENST00000460378 MMP24-AS1A0A0U1RRL7 71 aa5.47□□□□□ -1.53
EPB41-208ENST00000460378 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
EPB41-208ENST00000460378 MT1HL1P0DM35 61 aa5.46□□□□□ -1.54
EPB41-208ENST00000460378 LINC01554Q52M75 96 aa5.46□□□□□ -1.54
EPB41-208ENST00000460378 A0A1B0GU33 70 aa5.41□□□□□ -1.54
EPB41-208ENST00000460378 LINC00472Q9H8W2 130 aa5.41□□□□□ -1.54
EPB41-208ENST00000460378 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.54
EPB41-208ENST00000460378 PLAC4Q8WY50 150 aa5.4□□□□□ -1.54
EPB41-208ENST00000460378 H3BS24 57 aa5.4□□□□□ -1.55
EPB41-208ENST00000460378 KRTAP17-1Q9BYP8 105 aa5.4□□□□□ -1.55
EPB41-208ENST00000460378 KRTAP10-10P60014 251 aa5.39□□□□□ -1.55
EPB41-208ENST00000460378 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
EPB41-208ENST00000460378 DNAH9Q9NYC9 4486 aa5.35□□□□□ -1.55
EPB41-208ENST00000460378 Q5W150 140 aa5.35□□□□□ -1.55
EPB41-208ENST00000460378 R4GN34 69 aa5.33□□□□□ -1.56
EPB41-208ENST00000460378 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
EPB41-208ENST00000460378 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
EPB41-208ENST00000460378 A8MUU9 505 aa5.32□□□□□ -1.56
EPB41-208ENST00000460378 ZNF469Q96JG9 3925 aaPredicted RBP5.31□□□□□ -1.56
EPB41-208ENST00000460378 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
EPB41-208ENST00000460378 ANK2Q01484 3957 aa5.3□□□□□ -1.56
EPB41-208ENST00000460378 KRTAP10-4P60372 401 aaPredicted RBP5.3□□□□□ -1.56
EPB41-208ENST00000460378 DMAC1Q96GE9 116 aa5.26□□□□□ -1.57
EPB41-208ENST00000460378 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
EPB41-208ENST00000460378 DNAH11Q96DT5 4516 aa5.23□□□□□ -1.57
EPB41-208ENST00000460378 A8MU10 97 aa5.19□□□□□ -1.58
EPB41-208ENST00000460378 NOTCH2NLQ7Z3S9 236 aa5.19□□□□□ -1.58
EPB41-208ENST00000460378 M0QZ58 72 aa5.19□□□□□ -1.58
EPB41-208ENST00000460378 PRKDCP78527 4128 aaKnown RBP5.17□□□□□ -1.58
EPB41-208ENST00000460378 A6NN06 94 aa5.16□□□□□ -1.58
EPB41-208ENST00000460378 SVEP1Q4LDE5 3571 aa5.15□□□□□ -1.58
EPB41-208ENST00000460378 ROMO1P60602 79 aa5.15□□□□□ -1.58
EPB41-208ENST00000460378 SPATA8Q6RVD6 105 aa5.15□□□□□ -1.58
EPB41-208ENST00000460378 CUBNO60494 3623 aa5.14□□□□□ -1.59
EPB41-208ENST00000460378 PLECQ15149 4684 aaKnown RBP5.13□□□□□ -1.59
EPB41-208ENST00000460378 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
EPB41-208ENST00000460378 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
EPB41-208ENST00000460378 DYNC2H1Q8NCM8 4307 aaKnown RBP5.1□□□□□ -1.59
EPB41-208ENST00000460378 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
EPB41-208ENST00000460378 VPS13CQ709C8 3753 aa5.08□□□□□ -1.6
EPB41-208ENST00000460378 DNAH5Q8TE73 4624 aa5.06□□□□□ -1.6
EPB41-208ENST00000460378 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
EPB41-208ENST00000460378 DNAH10Q8IVF4 4471 aa5.02□□□□□ -1.61
EPB41-208ENST00000460378 RYR3Q15413 4870 aa5.02□□□□□ -1.61
EPB41-208ENST00000460378 RYR2Q92736 4967 aa5.01□□□□□ -1.61
EPB41-208ENST00000460378 DYNC1H1Q14204 4646 aaKnown RBP4.99□□□□□ -1.61
EPB41-208ENST00000460378 RYR1P21817 5038 aa4.98□□□□□ -1.61
EPB41-208ENST00000460378 KIAA1109Q2LD37 5005 aa4.98□□□□□ -1.61
EPB41-208ENST00000460378 KRTAP16-1A8MUX0 517 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms