RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 IGF2RP11717 2491 aa1.25□□□□□ -2.21
CCDC50-203ENST00000460064 DMXL2Q8TDJ6 3036 aa1.25□□□□□ -2.21
CCDC50-203ENST00000460064 SPRR1BP22528 89 aa1.25□□□□□ -2.21
CCDC50-203ENST00000460064 SNRPGP62308 76 aaKnown RBP1.25□□□□□ -2.21
CCDC50-203ENST00000460064 Q9Y3F1 56 aa1.25□□□□□ -2.21
CCDC50-203ENST00000460064 CEP295Q9C0D2 2601 aa1.24□□□□□ -2.21
CCDC50-203ENST00000460064 MINOS1Q5TGZ0 78 aa1.24□□□□□ -2.21
CCDC50-203ENST00000460064 WFDC13Q8IUB5 93 aa1.24□□□□□ -2.21
CCDC50-203ENST00000460064 NF1P21359 2839 aa1.24□□□□□ -2.21
CCDC50-203ENST00000460064 PTPRQQ9UMZ3 2332 aa1.23□□□□□ -2.21
CCDC50-203ENST00000460064 DNHD1Q96M86 4753 aa1.23□□□□□ -2.21
CCDC50-203ENST00000460064 DOPEY2Q9Y3R5 2298 aa1.23□□□□□ -2.21
CCDC50-203ENST00000460064 COL12A1Q99715 3063 aa1.23□□□□□ -2.21
CCDC50-203ENST00000460064 DEFB105AQ8NG35 78 aa1.23□□□□□ -2.21
CCDC50-203ENST00000460064 SETD2Q9BYW2 2564 aaPredicted RBP1.23□□□□□ -2.21
CCDC50-203ENST00000460064 SPG11Q96JI7 2443 aa1.23□□□□□ -2.21
CCDC50-203ENST00000460064 SPENQ96T58 3664 aaKnown RBP1.22□□□□□ -2.21
CCDC50-203ENST00000460064 C6orf48Q9UBA6 75 aa1.22□□□□□ -2.21
CCDC50-203ENST00000460064 AKAP13Q12802 2813 aa1.22□□□□□ -2.21
CCDC50-203ENST00000460064 TLN1Q9Y490 2541 aaKnown RBP1.22□□□□□ -2.21
CCDC50-203ENST00000460064 CSMD1Q96PZ7 3565 aa1.22□□□□□ -2.21
CCDC50-203ENST00000460064 LRRK2Q5S007 2527 aa1.21□□□□□ -2.22
CCDC50-203ENST00000460064 DEFB130BP0DP73 79 aa1.21□□□□□ -2.22
CCDC50-203ENST00000460064 DEFB130AP0DP74 79 aa1.21□□□□□ -2.22
CCDC50-203ENST00000460064 RPS27P42677 84 aaKnown RBP1.21□□□□□ -2.22
CCDC50-203ENST00000460064 KLK9Q2XQG4 91 aa1.21□□□□□ -2.22
CCDC50-203ENST00000460064 RPS27LQ71UM5 84 aaKnown RBP1.21□□□□□ -2.22
CCDC50-203ENST00000460064 SMIM2Q9BVW6 85 aa1.21□□□□□ -2.22
CCDC50-203ENST00000460064 PLCE1Q9P212 2302 aa1.21□□□□□ -2.22
CCDC50-203ENST00000460064 USF3Q68DE3 2245 aa1.2□□□□□ -2.22
CCDC50-203ENST00000460064 OTOGQ6ZRI0 2925 aa1.2□□□□□ -2.22
CCDC50-203ENST00000460064 F8P00451 2351 aa1.2□□□□□ -2.22
CCDC50-203ENST00000460064 IAPPP10997 89 aa1.2□□□□□ -2.22
CCDC50-203ENST00000460064 NBEAL1Q6ZS30 2694 aa1.2□□□□□ -2.22
CCDC50-203ENST00000460064 MTORP42345 2549 aa1.18□□□□□ -2.22
CCDC50-203ENST00000460064 USP9YO00507 2555 aaPredicted RBP1.18□□□□□ -2.22
CCDC50-203ENST00000460064 ADGRG4Q8IZF6 3080 aa1.18□□□□□ -2.22
CCDC50-203ENST00000460064 BOD1L1Q8NFC6 3051 aa1.18□□□□□ -2.22
CCDC50-203ENST00000460064 LRBAP50851 2863 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 CSMD2Q7Z408 3487 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 CD52P31358 61 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 SMR3AQ99954 134 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 HIVEP1P15822 2718 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 APC2O95996 2303 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 ACACAQ13085 2346 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 ANKHD1Q8IWZ3 2542 aaKnown RBP1.17□□□□□ -2.22
CCDC50-203ENST00000460064 ATRQ13535 2644 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 FLNCQ14315 2725 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 ITPR2Q14571 2701 aa1.17□□□□□ -2.22
CCDC50-203ENST00000460064 PDZD2O15018 2839 aa1.16□□□□□ -2.22
CCDC50-203ENST00000460064 CCDC168Q8NDH2 2452 aa1.16□□□□□ -2.22
CCDC50-203ENST00000460064 STAB1Q9NY15 2570 aa1.16□□□□□ -2.22
CCDC50-203ENST00000460064 HIVEP3Q5T1R4 2406 aa1.16□□□□□ -2.22
CCDC50-203ENST00000460064 NDUFA1O15239 70 aa1.16□□□□□ -2.22
CCDC50-203ENST00000460064 UTP20O75691 2785 aaKnown RBP1.16□□□□□ -2.22
CCDC50-203ENST00000460064 NIPBLQ6KC79 2804 aaeCLIP1.16□□□□□ -2.22
CCDC50-203ENST00000460064 NOTCH1P46531 2555 aa1.15□□□□□ -2.22
CCDC50-203ENST00000460064 NBEAL2Q6ZNJ1 2754 aa1.15□□□□□ -2.22
CCDC50-203ENST00000460064 ATMQ13315 3056 aa1.15□□□□□ -2.22
CCDC50-203ENST00000460064 COL6A5A8TX70 2615 aa1.15□□□□□ -2.23
CCDC50-203ENST00000460064 CELSR1Q9NYQ6 3014 aa1.15□□□□□ -2.23
CCDC50-203ENST00000460064 CELSR2Q9HCU4 2923 aa1.15□□□□□ -2.23
CCDC50-203ENST00000460064 FLNAP21333 2647 aaKnown RBP1.15□□□□□ -2.23
CCDC50-203ENST00000460064 AKAP9Q99996 3911 aa1.14□□□□□ -2.23
CCDC50-203ENST00000460064 CRYBG3Q68DQ2 2970 aa1.14□□□□□ -2.23
CCDC50-203ENST00000460064 MGAQ8IWI9 3026 aa1.14□□□□□ -2.23
CCDC50-203ENST00000460064 CUBNO60494 3623 aa1.14□□□□□ -2.23
CCDC50-203ENST00000460064 APCP25054 2843 aa1.13□□□□□ -2.23
CCDC50-203ENST00000460064 PKD1L1Q8TDX9 2849 aa1.13□□□□□ -2.23
CCDC50-203ENST00000460064 CSPG4Q6UVK1 2322 aa1.13□□□□□ -2.23
CCDC50-203ENST00000460064 NBASA2RRP1 2371 aa1.13□□□□□ -2.23
CCDC50-203ENST00000460064 WT1-ASQ06250 92 aa1.12□□□□□ -2.23
CCDC50-203ENST00000460064 DEFB109BQ30KR1 87 aa1.12□□□□□ -2.23
CCDC50-203ENST00000460064 BSNQ9UPA5 3926 aa1.11□□□□□ -2.23
CCDC50-203ENST00000460064 SPTBN1Q01082 2364 aaKnown RBP1.11□□□□□ -2.23
CCDC50-203ENST00000460064 LAMA1P25391 3075 aa1.11□□□□□ -2.23
CCDC50-203ENST00000460064 MEGF8Q7Z7M0 2845 aa1.11□□□□□ -2.23
CCDC50-203ENST00000460064 CENPEQ02224 2701 aa1.09□□□□□ -2.23
CCDC50-203ENST00000460064 TLN2Q9Y4G6 2542 aa1.09□□□□□ -2.23
CCDC50-203ENST00000460064 WFDC10BQ8IUB3 73 aa1.09□□□□□ -2.23
CCDC50-203ENST00000460064 TGP01266 2768 aa1.09□□□□□ -2.24
CCDC50-203ENST00000460064 ZNF469Q96JG9 3925 aaPredicted RBP1.08□□□□□ -2.24
CCDC50-203ENST00000460064 BIRC6Q9NR09 4857 aa1.08□□□□□ -2.24
CCDC50-203ENST00000460064 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
CCDC50-203ENST00000460064 KAAG1Q9UBP8 84 aa1.08□□□□□ -2.24
CCDC50-203ENST00000460064 VPS13CQ709C8 3753 aa1.08□□□□□ -2.24
CCDC50-203ENST00000460064 S4R3F8 94 aa1.07□□□□□ -2.24
CCDC50-203ENST00000460064 RYR3Q15413 4870 aa1.07□□□□□ -2.24
CCDC50-203ENST00000460064 KMT2CQ8NEZ4 4911 aaKnown RBP1.07□□□□□ -2.24
CCDC50-203ENST00000460064 ANK2Q01484 3957 aa1.07□□□□□ -2.24
CCDC50-203ENST00000460064 ACANP16112 2415 aa1.07□□□□□ -2.24
CCDC50-203ENST00000460064 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
CCDC50-203ENST00000460064 DCHS2Q6V1P9 2916 aa1.06□□□□□ -2.24
CCDC50-203ENST00000460064 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
CCDC50-203ENST00000460064 VWFP04275 2813 aa1.06□□□□□ -2.24
CCDC50-203ENST00000460064 MGAM2Q2M2H8 2515 aa1.06□□□□□ -2.24
CCDC50-203ENST00000460064 MXRA5Q9NR99 2828 aa1.05□□□□□ -2.24
CCDC50-203ENST00000460064 IGLV5-48A0A075B6I7 105 aa1.05□□□□□ -2.24
CCDC50-203ENST00000460064 NSD1Q96L73 2696 aaPredicted RBP1.05□□□□□ -2.24
CCDC50-203ENST00000460064 U3KQA8 63 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms