RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 PANO1I0J062 215 aa3.67□□□□□ -1.82
UBQLN4-202ENST00000459954 CDK2AP2O75956 126 aa3.67□□□□□ -1.82
UBQLN4-202ENST00000459954 PRR4Q16378 134 aa3.67□□□□□ -1.82
UBQLN4-202ENST00000459954 Q5VV11 94 aa3.67□□□□□ -1.82
UBQLN4-202ENST00000459954 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
UBQLN4-202ENST00000459954 COA5Q86WW8 74 aa3.67□□□□□ -1.82
UBQLN4-202ENST00000459954 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.67□□□□□ -1.82
UBQLN4-202ENST00000459954 IGLV9-49A0A0B4J1Y8 123 aa3.66□□□□□ -1.82
UBQLN4-202ENST00000459954 A8MUN3 132 aa3.66□□□□□ -1.82
UBQLN4-202ENST00000459954 C8orf87E5RJ46 101 aa3.66□□□□□ -1.82
UBQLN4-202ENST00000459954 RTL8CO15255 209 aa3.66□□□□□ -1.82
UBQLN4-202ENST00000459954 Q75L30 129 aa3.66□□□□□ -1.82
UBQLN4-202ENST00000459954 SSBP3-AS1Q7Z2R9 100 aa3.66□□□□□ -1.82
UBQLN4-202ENST00000459954 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
UBQLN4-202ENST00000459954 KMT2AQ03164 3969 aa3.65□□□□□ -1.83
UBQLN4-202ENST00000459954 PSPHP1O15172 72 aa3.65□□□□□ -1.83
UBQLN4-202ENST00000459954 PSORS1C2Q9UIG4 136 aa3.65□□□□□ -1.83
UBQLN4-202ENST00000459954 PLECQ15149 4684 aaKnown RBP3.65□□□□□ -1.83
UBQLN4-202ENST00000459954 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
UBQLN4-202ENST00000459954 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
UBQLN4-202ENST00000459954 IGHV6-1A0A0B4J1U7 121 aa3.63□□□□□ -1.83
UBQLN4-202ENST00000459954 DNAH10Q8IVF4 4471 aa3.62□□□□□ -1.83
UBQLN4-202ENST00000459954 IGLV7-43P04211 117 aa3.62□□□□□ -1.83
UBQLN4-202ENST00000459954 KRTAP13-3Q3SY46 172 aa3.62□□□□□ -1.83
UBQLN4-202ENST00000459954 ATP11AUNQ6ZP68 121 aa3.62□□□□□ -1.83
UBQLN4-202ENST00000459954 VPS13DQ5THJ4 4388 aa3.61□□□□□ -1.83
UBQLN4-202ENST00000459954 A0A1B0GVY2 172 aa3.61□□□□□ -1.83
UBQLN4-202ENST00000459954 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
UBQLN4-202ENST00000459954 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
UBQLN4-202ENST00000459954 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
UBQLN4-202ENST00000459954 ALMS1Q8TCU4 4167 aa3.6□□□□□ -1.83
UBQLN4-202ENST00000459954 LCA10Q71F78 164 aa3.6□□□□□ -1.83
UBQLN4-202ENST00000459954 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
UBQLN4-202ENST00000459954 SACSQ9NZJ4 4579 aa3.59□□□□□ -1.83
UBQLN4-202ENST00000459954 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.83
UBQLN4-202ENST00000459954 HRES1P13985 223 aa3.59□□□□□ -1.83
UBQLN4-202ENST00000459954 ACYP2P14621 99 aa3.59□□□□□ -1.83
UBQLN4-202ENST00000459954 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
UBQLN4-202ENST00000459954 FAM229AH3BQW9 127 aa3.58□□□□□ -1.84
UBQLN4-202ENST00000459954 HECTD4Q9Y4D8 3996 aa3.58□□□□□ -1.84
UBQLN4-202ENST00000459954 A0A087X002 238 aa3.57□□□□□ -1.84
UBQLN4-202ENST00000459954 A6NED7 52 aa3.57□□□□□ -1.84
UBQLN4-202ENST00000459954 NOTCH2NLQ7Z3S9 236 aa3.57□□□□□ -1.84
UBQLN4-202ENST00000459954 DNAH17Q9UFH2 4485 aa3.56□□□□□ -1.84
UBQLN4-202ENST00000459954 DNAH6Q9C0G6 4158 aa3.56□□□□□ -1.84
UBQLN4-202ENST00000459954 LINC00313P59037 77 aa3.56□□□□□ -1.84
UBQLN4-202ENST00000459954 Q5W150 140 aa3.56□□□□□ -1.84
UBQLN4-202ENST00000459954 KRTAP10-2P60368 255 aa3.55□□□□□ -1.84
UBQLN4-202ENST00000459954 Q6ZSA8 131 aa3.55□□□□□ -1.84
UBQLN4-202ENST00000459954 CIRBP-AS1Q8TBR5 109 aa3.55□□□□□ -1.84
UBQLN4-202ENST00000459954 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
UBQLN4-202ENST00000459954 RYR3Q15413 4870 aa3.55□□□□□ -1.84
UBQLN4-202ENST00000459954 RYR2Q92736 4967 aa3.54□□□□□ -1.84
UBQLN4-202ENST00000459954 IGKV2-30P06310 120 aa3.54□□□□□ -1.84
UBQLN4-202ENST00000459954 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
UBQLN4-202ENST00000459954 ANAPC11Q9NYG5 84 aa3.54□□□□□ -1.84
UBQLN4-202ENST00000459954 FRAS1Q86XX4 4008 aa3.53□□□□□ -1.84
UBQLN4-202ENST00000459954 A6NN06 94 aa3.53□□□□□ -1.84
UBQLN4-202ENST00000459954 SPINK6Q6UWN8 80 aa3.53□□□□□ -1.84
UBQLN4-202ENST00000459954 KRTAP16-1A8MUX0 517 aa3.52□□□□□ -1.85
UBQLN4-202ENST00000459954 C7orf65Q6ZTY9 151 aa3.52□□□□□ -1.85
UBQLN4-202ENST00000459954 PKHD1P08F94 4074 aa3.51□□□□□ -1.85
UBQLN4-202ENST00000459954 HYDINQ4G0P3 5121 aa3.51□□□□□ -1.85
UBQLN4-202ENST00000459954 PLA2G1BP04054 148 aaKnown RBP3.51□□□□□ -1.85
UBQLN4-202ENST00000459954 A8MU10 97 aa3.5□□□□□ -1.85
UBQLN4-202ENST00000459954 KRTAP10-1P60331 282 aa3.5□□□□□ -1.85
UBQLN4-202ENST00000459954 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
UBQLN4-202ENST00000459954 KRTAP13-2Q52LG2 175 aa3.5□□□□□ -1.85
UBQLN4-202ENST00000459954 Q8N1X5 172 aa3.5□□□□□ -1.85
UBQLN4-202ENST00000459954 DNAH2Q9P225 4427 aa3.5□□□□□ -1.85
UBQLN4-202ENST00000459954 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
UBQLN4-202ENST00000459954 SPINK7P58062 85 aa3.49□□□□□ -1.85
UBQLN4-202ENST00000459954 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
UBQLN4-202ENST00000459954 PKD1P98161 4303 aa3.48□□□□□ -1.85
UBQLN4-202ENST00000459954 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
UBQLN4-202ENST00000459954 SPINK1P00995 79 aa3.48□□□□□ -1.85
UBQLN4-202ENST00000459954 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
UBQLN4-202ENST00000459954 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
UBQLN4-202ENST00000459954 IGKV2D-30A0A075B6S6 120 aa3.46□□□□□ -1.86
UBQLN4-202ENST00000459954 A0A1B0GU69 56 aa3.46□□□□□ -1.86
UBQLN4-202ENST00000459954 XP32Q5T750 250 aa3.46□□□□□ -1.86
UBQLN4-202ENST00000459954 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
UBQLN4-202ENST00000459954 UQCR11O14957 56 aa3.44□□□□□ -1.86
UBQLN4-202ENST00000459954 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
UBQLN4-202ENST00000459954 Q5VSD8 79 aa3.43□□□□□ -1.86
UBQLN4-202ENST00000459954 TYMSOSQ8TAI1 123 aa3.43□□□□□ -1.86
UBQLN4-202ENST00000459954 DNAH11Q96DT5 4516 aa3.41□□□□□ -1.86
UBQLN4-202ENST00000459954 SMR3BP02814 79 aaPredicted RBP3.4□□□□□ -1.87
UBQLN4-202ENST00000459954 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
UBQLN4-202ENST00000459954 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
UBQLN4-202ENST00000459954 LRP1BQ9NZR2 4599 aa3.4□□□□□ -1.87
UBQLN4-202ENST00000459954 LINC00304Q8N9R0 145 aa3.39□□□□□ -1.87
UBQLN4-202ENST00000459954 RETNLBQ9BQ08 111 aa3.39□□□□□ -1.87
UBQLN4-202ENST00000459954 DNAH5Q8TE73 4624 aa3.39□□□□□ -1.87
UBQLN4-202ENST00000459954 BIRC6Q9NR09 4857 aa3.38□□□□□ -1.87
UBQLN4-202ENST00000459954 A8MUU9 505 aa3.38□□□□□ -1.87
UBQLN4-202ENST00000459954 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
UBQLN4-202ENST00000459954 KRTAP10-4P60372 401 aaPredicted RBP3.36□□□□□ -1.87
UBQLN4-202ENST00000459954 KIAA1109Q2LD37 5005 aa3.36□□□□□ -1.87
UBQLN4-202ENST00000459954 DYNC1H1Q14204 4646 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms