RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 C7orf65Q6ZTY9 151 aa11.34□□□□□ -0.59
SEMA3B-208ENST00000456210 SPINK7P58062 85 aa11.33□□□□□ -0.6
SEMA3B-208ENST00000456210 NUPR2A6NF83 97 aa11.32□□□□□ -0.6
SEMA3B-208ENST00000456210 DYNC2H1Q8NCM8 4307 aaKnown RBP11.31□□□□□ -0.6
SEMA3B-208ENST00000456210 PANO1I0J062 215 aa11.31□□□□□ -0.6
SEMA3B-208ENST00000456210 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
SEMA3B-208ENST00000456210 PLECQ15149 4684 aaKnown RBP11.29□□□□□ -0.6
SEMA3B-208ENST00000456210 WWC2-AS2Q96NR7 200 aa11.27□□□□□ -0.61
SEMA3B-208ENST00000456210 ZNF706Q9Y5V0 76 aaPredicted RBP11.27□□□□□ -0.61
SEMA3B-208ENST00000456210 A0A087X002 238 aa11.24□□□□□ -0.61
SEMA3B-208ENST00000456210 NOTCH2NLQ7Z3S9 236 aa11.24□□□□□ -0.61
SEMA3B-208ENST00000456210 SPACA4Q8TDM5 124 aa11.24□□□□□ -0.61
SEMA3B-208ENST00000456210 KRTAP13-3Q3SY46 172 aa11.24□□□□□ -0.61
SEMA3B-208ENST00000456210 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.2□□□□□ -0.62
SEMA3B-208ENST00000456210 NBDYA0A0U1RRE5 68 aa11.19□□□□□ -0.62
SEMA3B-208ENST00000456210 Q6ZRN7 208 aaPredicted RBP11.18□□□□□ -0.62
SEMA3B-208ENST00000456210 PRR26Q8N8Z3 221 aa11.18□□□□□ -0.62
SEMA3B-208ENST00000456210 Q5W150 140 aa11.18□□□□□ -0.62
SEMA3B-208ENST00000456210 ACYP2P14621 99 aa11.16□□□□□ -0.62
SEMA3B-208ENST00000456210 ALMS1Q8TCU4 4167 aa11.15□□□□□ -0.62
SEMA3B-208ENST00000456210 IGLV5-52A0A0A0MRZ9 124 aa11.12□□□□□ -0.63
SEMA3B-208ENST00000456210 KMT2AQ03164 3969 aa11.11□□□□□ -0.63
SEMA3B-208ENST00000456210 DMAC1Q96GE9 116 aa11.1□□□□□ -0.63
SEMA3B-208ENST00000456210 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
SEMA3B-208ENST00000456210 ZNF861PO60384 105 aa11.09□□□□□ -0.63
SEMA3B-208ENST00000456210 ANAPC11Q9NYG5 84 aa11.08□□□□□ -0.63
SEMA3B-208ENST00000456210 C8orf87E5RJ46 101 aa11.06□□□□□ -0.64
SEMA3B-208ENST00000456210 HYDINQ4G0P3 5121 aa11.06□□□□□ -0.64
SEMA3B-208ENST00000456210 KMT2CQ8NEZ4 4911 aaKnown RBP11.06□□□□□ -0.64
SEMA3B-208ENST00000456210 VPS13DQ5THJ4 4388 aa11.04□□□□□ -0.64
SEMA3B-208ENST00000456210 SPINK6Q6UWN8 80 aa11.04□□□□□ -0.64
SEMA3B-208ENST00000456210 LINC00313P59037 77 aa11.04□□□□□ -0.64
SEMA3B-208ENST00000456210 DNAH8Q96JB1 4490 aa11.03□□□□□ -0.64
SEMA3B-208ENST00000456210 LY6G6CO95867 125 aa11□□□□□ -0.65
SEMA3B-208ENST00000456210 A0A087WTM6 91 aa10.99□□□□□ -0.65
SEMA3B-208ENST00000456210 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
SEMA3B-208ENST00000456210 SACSQ9NZJ4 4579 aa10.98□□□□□ -0.65
SEMA3B-208ENST00000456210 A0A1B0GU69 56 aa10.97□□□□□ -0.65
SEMA3B-208ENST00000456210 SPATA8Q6RVD6 105 aa10.97□□□□□ -0.65
SEMA3B-208ENST00000456210 FAM229AH3BQW9 127 aa10.96□□□□□ -0.65
SEMA3B-208ENST00000456210 RTL8CO15255 209 aa10.94□□□□□ -0.66
SEMA3B-208ENST00000456210 FRAS1Q86XX4 4008 aa10.94□□□□□ -0.66
SEMA3B-208ENST00000456210 IGKV2-30P06310 120 aa10.93□□□□□ -0.66
SEMA3B-208ENST00000456210 CIRBP-AS1Q8TBR5 109 aa10.93□□□□□ -0.66
SEMA3B-208ENST00000456210 PRAC1Q96KF2 57 aa10.92□□□□□ -0.66
SEMA3B-208ENST00000456210 SSBP3-AS1Q7Z2R9 100 aa10.91□□□□□ -0.66
SEMA3B-208ENST00000456210 DNAH2Q9P225 4427 aa10.91□□□□□ -0.66
SEMA3B-208ENST00000456210 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
SEMA3B-208ENST00000456210 HECTD4Q9Y4D8 3996 aa10.89□□□□□ -0.67
SEMA3B-208ENST00000456210 C1orf134Q5TEV5 83 aa10.87□□□□□ -0.67
SEMA3B-208ENST00000456210 ADM2Q7Z4H4 148 aa10.86□□□□□ -0.67
SEMA3B-208ENST00000456210 UQCR11O14957 56 aa10.85□□□□□ -0.67
SEMA3B-208ENST00000456210 MIR22HGQ0VDD5 57 aa10.85□□□□□ -0.67
SEMA3B-208ENST00000456210 RYR3Q15413 4870 aa10.85□□□□□ -0.67
SEMA3B-208ENST00000456210 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
SEMA3B-208ENST00000456210 RYR2Q92736 4967 aa10.82□□□□□ -0.68
SEMA3B-208ENST00000456210 KRTAP16-1A8MUX0 517 aa10.8□□□□□ -0.68
SEMA3B-208ENST00000456210 RETNLBQ9BQ08 111 aa10.8□□□□□ -0.68
SEMA3B-208ENST00000456210 LINC01554Q52M75 96 aa10.78□□□□□ -0.68
SEMA3B-208ENST00000456210 DNAH6Q9C0G6 4158 aa10.77□□□□□ -0.69
SEMA3B-208ENST00000456210 IGKV2D-30A0A075B6S6 120 aa10.7□□□□□ -0.7
SEMA3B-208ENST00000456210 FAT2Q9NYQ8 4349 aa10.7□□□□□ -0.7
SEMA3B-208ENST00000456210 KRTAP13-2Q52LG2 175 aa10.67□□□□□ -0.7
SEMA3B-208ENST00000456210 PKD1P98161 4303 aa10.62□□□□□ -0.71
SEMA3B-208ENST00000456210 PKHD1P08F94 4074 aa10.6□□□□□ -0.71
SEMA3B-208ENST00000456210 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
SEMA3B-208ENST00000456210 DNAH11Q96DT5 4516 aa10.59□□□□□ -0.71
SEMA3B-208ENST00000456210 CSAG1Q6PB30 78 aa10.57□□□□□ -0.72
SEMA3B-208ENST00000456210 C4orf48Q5BLP8 95 aa10.53□□□□□ -0.72
SEMA3B-208ENST00000456210 DNAH5Q8TE73 4624 aa10.52□□□□□ -0.72
SEMA3B-208ENST00000456210 KRTAP1-4P0C5Y4 121 aa10.49□□□□□ -0.73
SEMA3B-208ENST00000456210 EPPK1P58107 5090 aaKnown RBP10.48□□□□□ -0.73
SEMA3B-208ENST00000456210 Q6ZSA8 131 aa10.48□□□□□ -0.73
SEMA3B-208ENST00000456210 SPINK1P00995 79 aa10.46□□□□□ -0.74
SEMA3B-208ENST00000456210 KRTAP10-1P60331 282 aa10.46□□□□□ -0.74
SEMA3B-208ENST00000456210 Q8N1X5 172 aa10.44□□□□□ -0.74
SEMA3B-208ENST00000456210 A0A1B0GVY2 172 aa10.43□□□□□ -0.74
SEMA3B-208ENST00000456210 A8MUU9 505 aa10.41□□□□□ -0.74
SEMA3B-208ENST00000456210 H0YAA0 97 aa10.4□□□□□ -0.74
SEMA3B-208ENST00000456210 LRP1BQ9NZR2 4599 aa10.37□□□□□ -0.75
SEMA3B-208ENST00000456210 DYNC1H1Q14204 4646 aaKnown RBP10.36□□□□□ -0.75
SEMA3B-208ENST00000456210 TYMSOSQ8TAI1 123 aa10.32□□□□□ -0.76
SEMA3B-208ENST00000456210 KRTAP25-1Q3LHN0 102 aa10.29□□□□□ -0.76
SEMA3B-208ENST00000456210 LINC00304Q8N9R0 145 aa10.29□□□□□ -0.76
SEMA3B-208ENST00000456210 H3BS24 57 aa10.28□□□□□ -0.76
SEMA3B-208ENST00000456210 RPS29P62273 56 aaKnown RBP10.28□□□□□ -0.76
SEMA3B-208ENST00000456210 A0A1B0GU33 70 aa10.27□□□□□ -0.76
SEMA3B-208ENST00000456210 H1FX-AS1Q4G0G2 97 aa10.24□□□□□ -0.77
SEMA3B-208ENST00000456210 APOBP04114 4563 aaKnown RBP10.23□□□□□ -0.77
SEMA3B-208ENST00000456210 KIAA1109Q2LD37 5005 aa10.22□□□□□ -0.77
SEMA3B-208ENST00000456210 KRTAP3-1Q9BYR8 98 aa10.21□□□□□ -0.77
SEMA3B-208ENST00000456210 VPS13BQ7Z7G8 4022 aa10.21□□□□□ -0.78
SEMA3B-208ENST00000456210 C20orf166-AS1Q96NR2 134 aa10.19□□□□□ -0.78
SEMA3B-208ENST00000456210 FAT1Q14517 4588 aa10.14□□□□□ -0.79
SEMA3B-208ENST00000456210 HSPG2P98160 4391 aa10.13□□□□□ -0.79
SEMA3B-208ENST00000456210 SMR3BP02814 79 aaPredicted RBP10.12□□□□□ -0.79
SEMA3B-208ENST00000456210 ROMO1P60602 79 aa10.11□□□□□ -0.79
SEMA3B-208ENST00000456210 KRTAP17-1Q9BYP8 105 aa10.08□□□□□ -0.8
SEMA3B-208ENST00000456210 RYR1P21817 5038 aa10.07□□□□□ -0.8
SEMA3B-208ENST00000456210 K7ERS5 55 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms