RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 HECTD4Q9Y4D8 3996 aa6.13□□□□□ -1.43
CHCHD4P3-201ENST00000455954 A0A0G2JQZ4 141 aa6.12□□□□□ -1.43
CHCHD4P3-201ENST00000455954 NDUFS5O43920 106 aa6.12□□□□□ -1.43
CHCHD4P3-201ENST00000455954 PLAC8Q9NZF1 115 aa6.12□□□□□ -1.43
CHCHD4P3-201ENST00000455954 PKD1P98161 4303 aa6.11□□□□□ -1.43
CHCHD4P3-201ENST00000455954 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
CHCHD4P3-201ENST00000455954 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
CHCHD4P3-201ENST00000455954 KIAA1109Q2LD37 5005 aa6.11□□□□□ -1.43
CHCHD4P3-201ENST00000455954 IGKV2-24A0A0C4DH68 120 aa6.1□□□□□ -1.43
CHCHD4P3-201ENST00000455954 KRTAP13-1Q8IUC0 172 aa6.1□□□□□ -1.43
CHCHD4P3-201ENST00000455954 DNAH11Q96DT5 4516 aa6.09□□□□□ -1.43
CHCHD4P3-201ENST00000455954 PHF5AQ7RTV0 110 aaKnown RBP6.08□□□□□ -1.44
CHCHD4P3-201ENST00000455954 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
CHCHD4P3-201ENST00000455954 HERC2O95714 4834 aa6.08□□□□□ -1.44
CHCHD4P3-201ENST00000455954 LINC00483Q53H64 154 aa6.07□□□□□ -1.44
CHCHD4P3-201ENST00000455954 Q96NJ1 140 aa6.07□□□□□ -1.44
CHCHD4P3-201ENST00000455954 DYNC1H1Q14204 4646 aaKnown RBP6.07□□□□□ -1.44
CHCHD4P3-201ENST00000455954 IGLV5-52A0A0A0MRZ9 124 aa6.06□□□□□ -1.44
CHCHD4P3-201ENST00000455954 A6NED7 52 aa6.06□□□□□ -1.44
CHCHD4P3-201ENST00000455954 KRTAP10-1P60331 282 aa6.06□□□□□ -1.44
CHCHD4P3-201ENST00000455954 ZNF706Q9Y5V0 76 aaPredicted RBP6.06□□□□□ -1.44
CHCHD4P3-201ENST00000455954 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
CHCHD4P3-201ENST00000455954 A6NN06 94 aa6.05□□□□□ -1.44
CHCHD4P3-201ENST00000455954 Q8N1X5 172 aa6.05□□□□□ -1.44
CHCHD4P3-201ENST00000455954 KRTAP17-1Q9BYP8 105 aa6.05□□□□□ -1.44
CHCHD4P3-201ENST00000455954 LCA10Q71F78 164 aa6.04□□□□□ -1.44
CHCHD4P3-201ENST00000455954 KRTAP11-1Q8IUC1 163 aa6.04□□□□□ -1.44
CHCHD4P3-201ENST00000455954 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
CHCHD4P3-201ENST00000455954 PKHD1P08F94 4074 aa6.03□□□□□ -1.44
CHCHD4P3-201ENST00000455954 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
CHCHD4P3-201ENST00000455954 CHTF8P0CG12 524 aa6□□□□□ -1.45
CHCHD4P3-201ENST00000455954 PCOTHQ58A44 107 aa6□□□□□ -1.45
CHCHD4P3-201ENST00000455954 A8MU10 97 aa5.99□□□□□ -1.45
CHCHD4P3-201ENST00000455954 HRES1P13985 223 aa5.99□□□□□ -1.45
CHCHD4P3-201ENST00000455954 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
CHCHD4P3-201ENST00000455954 RYR1P21817 5038 aa5.99□□□□□ -1.45
CHCHD4P3-201ENST00000455954 LRP1BQ9NZR2 4599 aa5.99□□□□□ -1.45
CHCHD4P3-201ENST00000455954 SPTSSBQ8NFR3 76 aa5.98□□□□□ -1.45
CHCHD4P3-201ENST00000455954 SPACA4Q8TDM5 124 aa5.97□□□□□ -1.45
CHCHD4P3-201ENST00000455954 C8orf87E5RJ46 101 aa5.96□□□□□ -1.46
CHCHD4P3-201ENST00000455954 SMR3BP02814 79 aaPredicted RBP5.96□□□□□ -1.46
CHCHD4P3-201ENST00000455954 Q6ZSA8 131 aa5.96□□□□□ -1.46
CHCHD4P3-201ENST00000455954 FAM229AH3BQW9 127 aa5.95□□□□□ -1.46
CHCHD4P3-201ENST00000455954 Q5VSD8 79 aa5.95□□□□□ -1.46
CHCHD4P3-201ENST00000455954 SPAG11AQ6PDA7 123 aa5.95□□□□□ -1.46
CHCHD4P3-201ENST00000455954 RBM12B-AS1Q9P1G2 102 aa5.95□□□□□ -1.46
CHCHD4P3-201ENST00000455954 DNAH5Q8TE73 4624 aa5.94□□□□□ -1.46
CHCHD4P3-201ENST00000455954 A0A087X002 238 aa5.94□□□□□ -1.46
CHCHD4P3-201ENST00000455954 IGHV6-1A0A0B4J1U7 121 aa5.94□□□□□ -1.46
CHCHD4P3-201ENST00000455954 IGLV9-49A0A0B4J1Y8 123 aa5.94□□□□□ -1.46
CHCHD4P3-201ENST00000455954 KRTAP13-3Q3SY46 172 aa5.94□□□□□ -1.46
CHCHD4P3-201ENST00000455954 HSPG2P98160 4391 aa5.94□□□□□ -1.46
CHCHD4P3-201ENST00000455954 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
CHCHD4P3-201ENST00000455954 APOBP04114 4563 aaKnown RBP5.93□□□□□ -1.46
CHCHD4P3-201ENST00000455954 ACYP2P14621 99 aa5.93□□□□□ -1.46
CHCHD4P3-201ENST00000455954 SPINK7P58062 85 aa5.9□□□□□ -1.46
CHCHD4P3-201ENST00000455954 ZNF861PO60384 105 aa5.89□□□□□ -1.47
CHCHD4P3-201ENST00000455954 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
CHCHD4P3-201ENST00000455954 CIRBP-AS1Q8TBR5 109 aa5.89□□□□□ -1.47
CHCHD4P3-201ENST00000455954 DMAC1Q96GE9 116 aa5.89□□□□□ -1.47
CHCHD4P3-201ENST00000455954 ABCA13Q86UQ4 5058 aa5.88□□□□□ -1.47
CHCHD4P3-201ENST00000455954 PANO1I0J062 215 aa5.88□□□□□ -1.47
CHCHD4P3-201ENST00000455954 PRR26Q8N8Z3 221 aa5.87□□□□□ -1.47
CHCHD4P3-201ENST00000455954 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.87□□□□□ -1.47
CHCHD4P3-201ENST00000455954 SSBP3-AS1Q7Z2R9 100 aa5.85□□□□□ -1.47
CHCHD4P3-201ENST00000455954 PSORS1C2Q9UIG4 136 aa5.85□□□□□ -1.47
CHCHD4P3-201ENST00000455954 Q5W150 140 aa5.83□□□□□ -1.48
CHCHD4P3-201ENST00000455954 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
CHCHD4P3-201ENST00000455954 FAT1Q14517 4588 aa5.81□□□□□ -1.48
CHCHD4P3-201ENST00000455954 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
CHCHD4P3-201ENST00000455954 KRTAP10-4P60372 401 aaPredicted RBP5.81□□□□□ -1.48
CHCHD4P3-201ENST00000455954 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
CHCHD4P3-201ENST00000455954 DNAH8Q96JB1 4490 aa5.81□□□□□ -1.48
CHCHD4P3-201ENST00000455954 A0A1B0GU69 56 aa5.79□□□□□ -1.48
CHCHD4P3-201ENST00000455954 J3QL48 77 aa5.78□□□□□ -1.48
CHCHD4P3-201ENST00000455954 IGLV7-43P04211 117 aa5.78□□□□□ -1.48
CHCHD4P3-201ENST00000455954 LINC00313P59037 77 aa5.77□□□□□ -1.49
CHCHD4P3-201ENST00000455954 SPINK6Q6UWN8 80 aa5.76□□□□□ -1.49
CHCHD4P3-201ENST00000455954 UQCR11O14957 56 aa5.75□□□□□ -1.49
CHCHD4P3-201ENST00000455954 SRRM2Q9UQ35 2752 aaKnown RBP5.74□□□□□ -1.49
CHCHD4P3-201ENST00000455954 FLG2Q5D862 2391 aaPredicted RBP5.74□□□□□ -1.49
CHCHD4P3-201ENST00000455954 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
CHCHD4P3-201ENST00000455954 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
CHCHD4P3-201ENST00000455954 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.5
CHCHD4P3-201ENST00000455954 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
CHCHD4P3-201ENST00000455954 IGKV2D-30A0A075B6S6 120 aa5.69□□□□□ -1.5
CHCHD4P3-201ENST00000455954 DMBT1Q9UGM3 2413 aaPredicted RBP5.69□□□□□ -1.5
CHCHD4P3-201ENST00000455954 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
CHCHD4P3-201ENST00000455954 MYCBP2O75592 4640 aa5.65□□□□□ -1.5
CHCHD4P3-201ENST00000455954 RETNLBQ9BQ08 111 aa5.65□□□□□ -1.5
CHCHD4P3-201ENST00000455954 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
CHCHD4P3-201ENST00000455954 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
CHCHD4P3-201ENST00000455954 LCE2DQ5TA82 110 aaPredicted RBP5.62□□□□□ -1.51
CHCHD4P3-201ENST00000455954 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
CHCHD4P3-201ENST00000455954 HERC1Q15751 4861 aa5.6□□□□□ -1.51
CHCHD4P3-201ENST00000455954 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
CHCHD4P3-201ENST00000455954 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
CHCHD4P3-201ENST00000455954 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
CHCHD4P3-201ENST00000455954 ADM2Q7Z4H4 148 aa5.57□□□□□ -1.52
CHCHD4P3-201ENST00000455954 SPINK1P00995 79 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms