RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 C1orf195Q5TG92 126 aa9.47□□□□□ -0.89
CCDC144B-204ENST00000455629 SS18L2Q9UHA2 77 aa9.47□□□□□ -0.89
CCDC144B-204ENST00000455629 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
CCDC144B-204ENST00000455629 C21orf62-AS1Q17RA5 79 aa9.44□□□□□ -0.9
CCDC144B-204ENST00000455629 KRTAP10-6P60371 365 aaPredicted RBP9.43□□□□□ -0.9
CCDC144B-204ENST00000455629 ETDBQ3ZM63 59 aa9.43□□□□□ -0.9
CCDC144B-204ENST00000455629 A0A1B0GW54 56 aa9.42□□□□□ -0.9
CCDC144B-204ENST00000455629 RPL37P61927 97 aaKnown RBP9.41□□□□□ -0.9
CCDC144B-204ENST00000455629 Q96NJ1 140 aa9.39□□□□□ -0.91
CCDC144B-204ENST00000455629 M0R2T5 61 aa9.38□□□□□ -0.91
CCDC144B-204ENST00000455629 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
CCDC144B-204ENST00000455629 LINC00472Q9H8W2 130 aa9.35□□□□□ -0.91
CCDC144B-204ENST00000455629 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
CCDC144B-204ENST00000455629 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
CCDC144B-204ENST00000455629 FLGP20930 4061 aaPredicted RBP9.29□□□□□ -0.92
CCDC144B-204ENST00000455629 NREPQ16612 68 aa9.29□□□□□ -0.92
CCDC144B-204ENST00000455629 SIGMAR1Q99720 223 aa9.28□□□□□ -0.92
CCDC144B-204ENST00000455629 J3KT08 172 aa9.25□□□□□ -0.93
CCDC144B-204ENST00000455629 LINC00846Q9NV44 126 aa9.25□□□□□ -0.93
CCDC144B-204ENST00000455629 Q6ZVQ6 151 aa9.23□□□□□ -0.93
CCDC144B-204ENST00000455629 UBL5Q9BZL1 73 aa9.2□□□□□ -0.94
CCDC144B-204ENST00000455629 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
CCDC144B-204ENST00000455629 Q75L30 129 aa9.18□□□□□ -0.94
CCDC144B-204ENST00000455629 FAM240AA0A1B0GVK7 77 aa9.17□□□□□ -0.94
CCDC144B-204ENST00000455629 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
CCDC144B-204ENST00000455629 A8MWP4 228 aa9.17□□□□□ -0.94
CCDC144B-204ENST00000455629 ACYP1P07311 99 aa9.17□□□□□ -0.94
CCDC144B-204ENST00000455629 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
CCDC144B-204ENST00000455629 BPY2O14599 106 aa9.16□□□□□ -0.94
CCDC144B-204ENST00000455629 DSCR10P59022 87 aa9.16□□□□□ -0.94
CCDC144B-204ENST00000455629 NDUFB1O75438 58 aa9.15□□□□□ -0.94
CCDC144B-204ENST00000455629 IGKV3D-7A0A0C4DH55 119 aa9.14□□□□□ -0.95
CCDC144B-204ENST00000455629 LINC00313P59037 77 aa9.13□□□□□ -0.95
CCDC144B-204ENST00000455629 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
CCDC144B-204ENST00000455629 C8orf87E5RJ46 101 aa9.11□□□□□ -0.95
CCDC144B-204ENST00000455629 PRR15Q8IV56 129 aa9.11□□□□□ -0.95
CCDC144B-204ENST00000455629 K7EQZ3 153 aa9.09□□□□□ -0.95
CCDC144B-204ENST00000455629 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
CCDC144B-204ENST00000455629 J3QR89 54 aa9.08□□□□□ -0.96
CCDC144B-204ENST00000455629 C8orf17Q9NRJ1 99 aa9.07□□□□□ -0.96
CCDC144B-204ENST00000455629 Q8N9L7 120 aa9.06□□□□□ -0.96
CCDC144B-204ENST00000455629 CXCL6P80162 114 aa9.04□□□□□ -0.96
CCDC144B-204ENST00000455629 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
CCDC144B-204ENST00000455629 A8MUU9 505 aa9.03□□□□□ -0.96
CCDC144B-204ENST00000455629 MMP24-AS1A0A0U1RRL7 71 aa9.02□□□□□ -0.97
CCDC144B-204ENST00000455629 KRTAP9-8Q9BYQ0 159 aa9.01□□□□□ -0.97
CCDC144B-204ENST00000455629 ATP5EP2Q5VTU8 51 aa8.99□□□□□ -0.97
CCDC144B-204ENST00000455629 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
CCDC144B-204ENST00000455629 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.98□□□□□ -0.97
CCDC144B-204ENST00000455629 K7ERU9 68 aa8.97□□□□□ -0.97
CCDC144B-204ENST00000455629 hDV103S1A0JD37 113 aa8.96□□□□□ -0.98
CCDC144B-204ENST00000455629 KRTAP9-7A8MTY7 169 aa8.96□□□□□ -0.98
CCDC144B-204ENST00000455629 TMEM254Q8TBM7 123 aa8.96□□□□□ -0.98
CCDC144B-204ENST00000455629 Q8N9P0 234 aaPredicted RBP8.95□□□□□ -0.98
CCDC144B-204ENST00000455629 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
CCDC144B-204ENST00000455629 MRPL34Q9BQ48 92 aaKnown RBP8.94□□□□□ -0.98
CCDC144B-204ENST00000455629 CASC2Q6XLA1 102 aa8.93□□□□□ -0.98
CCDC144B-204ENST00000455629 HCG22E2RYF7 251 aa8.92□□□□□ -0.98
CCDC144B-204ENST00000455629 USH2AO75445 5202 aa8.92□□□□□ -0.98
CCDC144B-204ENST00000455629 SSPOA2VEC9 5147 aa8.9□□□□□ -0.98
CCDC144B-204ENST00000455629 HIST1H4AP62805 103 aaKnown RBP8.87□□□□□ -0.99
CCDC144B-204ENST00000455629 NDUFS5O43920 106 aa8.84□□□□□ -0.99
CCDC144B-204ENST00000455629 MT2AP02795 61 aa8.84□□□□□ -0.99
CCDC144B-204ENST00000455629 ZCCHC13Q8WW36 166 aaKnown RBP8.84□□□□□ -0.99
CCDC144B-204ENST00000455629 FAM236DA0A1B0GTK5 79 aa8.83□□□□□ -1
CCDC144B-204ENST00000455629 FAM236CP0DP71 79 aa8.83□□□□□ -1
CCDC144B-204ENST00000455629 A0A087WVE0 104 aa8.81□□□□□ -1
CCDC144B-204ENST00000455629 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
CCDC144B-204ENST00000455629 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
CCDC144B-204ENST00000455629 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
CCDC144B-204ENST00000455629 MT1FP04733 61 aa8.76□□□□□ -1.01
CCDC144B-204ENST00000455629 FCGBPQ9Y6R7 5405 aaPredicted RBP8.76□□□□□ -1.01
CCDC144B-204ENST00000455629 LCE2BO14633 110 aa8.75□□□□□ -1.01
CCDC144B-204ENST00000455629 HRES1P13985 223 aa8.75□□□□□ -1.01
CCDC144B-204ENST00000455629 Q5W150 140 aa8.74□□□□□ -1.01
CCDC144B-204ENST00000455629 KRTAP19-1Q8IUB9 90 aa8.74□□□□□ -1.01
CCDC144B-204ENST00000455629 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
CCDC144B-204ENST00000455629 KRTAP9-3Q9BYQ3 159 aa8.73□□□□□ -1.01
CCDC144B-204ENST00000455629 IMUPQ9GZP8 106 aa8.72□□□□□ -1.01
CCDC144B-204ENST00000455629 TP53AIP1Q9HCN2 124 aa8.71□□□□□ -1.02
CCDC144B-204ENST00000455629 SPINK7P58062 85 aa8.67□□□□□ -1.02
CCDC144B-204ENST00000455629 UQCRQO14949 82 aa8.61□□□□□ -1.03
CCDC144B-204ENST00000455629 IGKV2D-30A0A075B6S6 120 aa8.59□□□□□ -1.03
CCDC144B-204ENST00000455629 IGKV2-30P06310 120 aa8.59□□□□□ -1.03
CCDC144B-204ENST00000455629 OCR1Q9BZK8 76 aa8.59□□□□□ -1.03
CCDC144B-204ENST00000455629 TRAV22A0A0B4J277 110 aa8.58□□□□□ -1.04
CCDC144B-204ENST00000455629 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
CCDC144B-204ENST00000455629 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
CCDC144B-204ENST00000455629 MACF1Q9UPN3 7388 aaKnown RBP8.57□□□□□ -1.04
CCDC144B-204ENST00000455629 FAM236AA0A1B0GUQ0 79 aa8.56□□□□□ -1.04
CCDC144B-204ENST00000455629 FAM236BA0A1B0GV22 79 aa8.56□□□□□ -1.04
CCDC144B-204ENST00000455629 H0Y9P7 68 aa8.53□□□□□ -1.04
CCDC144B-204ENST00000455629 KRTAP19-6Q3LI70 58 aa8.52□□□□□ -1.05
CCDC144B-204ENST00000455629 SYNE2Q8WXH0 6885 aaKnown RBP8.51□□□□□ -1.05
CCDC144B-204ENST00000455629 ATOX1O00244 68 aa8.5□□□□□ -1.05
CCDC144B-204ENST00000455629 LOC101927531A0A1B0GV80 90 aa8.48□□□□□ -1.05
CCDC144B-204ENST00000455629 C5orf47Q569G3 176 aa8.47□□□□□ -1.05
CCDC144B-204ENST00000455629 CYP4F30PQ9H0H9 118 aa8.47□□□□□ -1.05
CCDC144B-204ENST00000455629 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.06
CCDC144B-204ENST00000455629 MP68P56378 58 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms