RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 GCN1Q92616 2671 aaKnown RBP-0.5□□□□□ -2.49
HMGN3P1-201ENST00000453847 GLI2P10070 1586 aa-0.5□□□□□ -2.49
HMGN3P1-201ENST00000453847 KMT2CQ8NEZ4 4911 aaKnown RBP-0.5□□□□□ -2.49
HMGN3P1-201ENST00000453847 C9orf92A6NGG3 77 aa-0.51□□□□□ -2.49
HMGN3P1-201ENST00000453847 MT1AP04731 61 aa-0.51□□□□□ -2.49
HMGN3P1-201ENST00000453847 PCLOQ9Y6V0 5065 aa-0.52□□□□□ -2.49
HMGN3P1-201ENST00000453847 SACSQ9NZJ4 4579 aa-0.52□□□□□ -2.49
HMGN3P1-201ENST00000453847 NCBP2-AS2Q69YL0 99 aa-0.52□□□□□ -2.49
HMGN3P1-201ENST00000453847 SPRR2FQ96RM1 72 aa-0.52□□□□□ -2.49
HMGN3P1-201ENST00000453847 TOGARAM1Q9Y4F4 1720 aa-0.52□□□□□ -2.49
HMGN3P1-201ENST00000453847 LINC01549A6NIU2 74 aa-0.53□□□□□ -2.49
HMGN3P1-201ENST00000453847 MINOS1Q5TGZ0 78 aa-0.53□□□□□ -2.49
HMGN3P1-201ENST00000453847 PKD1L2Q7Z442 2459 aa-0.53□□□□□ -2.49
HMGN3P1-201ENST00000453847 TACC2O95359 2948 aa-0.54□□□□□ -2.5
HMGN3P1-201ENST00000453847 WT1-ASQ06250 92 aa-0.54□□□□□ -2.5
HMGN3P1-201ENST00000453847 VPS13DQ5THJ4 4388 aa-0.54□□□□□ -2.5
HMGN3P1-201ENST00000453847 LY75O60449 1722 aa-0.55□□□□□ -2.5
HMGN3P1-201ENST00000453847 EPG5Q9HCE0 2579 aa-0.55□□□□□ -2.5
HMGN3P1-201ENST00000453847 MXRA5Q9NR99 2828 aa-0.56□□□□□ -2.5
HMGN3P1-201ENST00000453847 TEP1Q99973 2627 aaKnown RBP-0.56□□□□□ -2.5
HMGN3P1-201ENST00000453847 CROCC2H7BZ55 1655 aa-0.56□□□□□ -2.5
HMGN3P1-201ENST00000453847 FASNP49327 2511 aaKnown RBP-0.57□□□□□ -2.5
HMGN3P1-201ENST00000453847 KALRNO60229 2985 aa-0.57□□□□□ -2.5
HMGN3P1-201ENST00000453847 ANKRD11Q6UB99 2663 aaPredicted RBP-0.58□□□□□ -2.5
HMGN3P1-201ENST00000453847 CLASP1Q7Z460 1538 aa-0.58□□□□□ -2.5
HMGN3P1-201ENST00000453847 HIVEP1P15822 2718 aa-0.58□□□□□ -2.5
HMGN3P1-201ENST00000453847 CDC42BPAQ5VT25 1732 aa-0.58□□□□□ -2.5
HMGN3P1-201ENST00000453847 DNAH11Q96DT5 4516 aa-0.59□□□□□ -2.5
HMGN3P1-201ENST00000453847 C6orf48Q9UBA6 75 aa-0.59□□□□□ -2.5
HMGN3P1-201ENST00000453847 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.59□□□□□ -2.5
HMGN3P1-201ENST00000453847 STARD9Q9P2P6 4700 aa-0.6□□□□□ -2.5
HMGN3P1-201ENST00000453847 DNAH2Q9P225 4427 aa-0.6□□□□□ -2.5
HMGN3P1-201ENST00000453847 KRTAP19-8Q3LI54 63 aa-0.6□□□□□ -2.51
HMGN3P1-201ENST00000453847 MTORP42345 2549 aa-0.61□□□□□ -2.51
HMGN3P1-201ENST00000453847 A0A087WWC5 75 aa-0.61□□□□□ -2.51
HMGN3P1-201ENST00000453847 TIAM1Q13009 1591 aa-0.62□□□□□ -2.51
HMGN3P1-201ENST00000453847 SFTA3P0C7M3 94 aa-0.63□□□□□ -2.51
HMGN3P1-201ENST00000453847 FCER1GP30273 86 aa-0.63□□□□□ -2.51
HMGN3P1-201ENST00000453847 HERC1Q15751 4861 aa-0.65□□□□□ -2.51
HMGN3P1-201ENST00000453847 LRRK2Q5S007 2527 aa-0.65□□□□□ -2.51
HMGN3P1-201ENST00000453847 RANBP2P49792 3224 aaKnown RBP-0.65□□□□□ -2.51
HMGN3P1-201ENST00000453847 UBR4Q5T4S7 5183 aa-0.66□□□□□ -2.51
HMGN3P1-201ENST00000453847 M0R1W7 72 aa-0.66□□□□□ -2.52
HMGN3P1-201ENST00000453847 ALS2Q96Q42 1657 aa-0.67□□□□□ -2.52
HMGN3P1-201ENST00000453847 K7EMI3 77 aa-0.67□□□□□ -2.52
HMGN3P1-201ENST00000453847 MYO18BQ8IUG5 2567 aa-0.67□□□□□ -2.52
HMGN3P1-201ENST00000453847 FAT1Q14517 4588 aa-0.67□□□□□ -2.52
HMGN3P1-201ENST00000453847 LAMA1P25391 3075 aa-0.68□□□□□ -2.52
HMGN3P1-201ENST00000453847 MUC17Q685J3 4493 aa-0.68□□□□□ -2.52
HMGN3P1-201ENST00000453847 FAM186AA6NE01 2351 aa-0.68□□□□□ -2.52
HMGN3P1-201ENST00000453847 DNAH1Q9P2D7 4330 aa-0.69□□□□□ -2.52
HMGN3P1-201ENST00000453847 ABCA10Q8WWZ4 1543 aa-0.69□□□□□ -2.52
HMGN3P1-201ENST00000453847 TRIOO75962 3097 aa-0.7□□□□□ -2.52
HMGN3P1-201ENST00000453847 UTP20O75691 2785 aaKnown RBP-0.7□□□□□ -2.52
HMGN3P1-201ENST00000453847 NBEAL2Q6ZNJ1 2754 aa-0.7□□□□□ -2.52
HMGN3P1-201ENST00000453847 IGLV5-48A0A075B6I7 105 aa-0.7□□□□□ -2.52
HMGN3P1-201ENST00000453847 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.7□□□□□ -2.52
HMGN3P1-201ENST00000453847 NBEAQ8NFP9 2946 aa-0.71□□□□□ -2.52
HMGN3P1-201ENST00000453847 DEFB110Q30KQ9 67 aa-0.71□□□□□ -2.52
HMGN3P1-201ENST00000453847 UGGT1Q9NYU2 1555 aa-0.71□□□□□ -2.52
HMGN3P1-201ENST00000453847 USH2AO75445 5202 aa-0.71□□□□□ -2.52
HMGN3P1-201ENST00000453847 ACACBO00763 2458 aa-0.72□□□□□ -2.52
HMGN3P1-201ENST00000453847 IGIPA6NJ69 53 aa-0.73□□□□□ -2.53
HMGN3P1-201ENST00000453847 EEA1Q15075 1411 aa-0.73□□□□□ -2.53
HMGN3P1-201ENST00000453847 SPENQ96T58 3664 aaKnown RBP-0.74□□□□□ -2.53
HMGN3P1-201ENST00000453847 SMIM31A0A1B0GVY4 71 aa-0.74□□□□□ -2.53
HMGN3P1-201ENST00000453847 WDR87Q6ZQQ6 2873 aa-0.74□□□□□ -2.53
HMGN3P1-201ENST00000453847 DNAH8Q96JB1 4490 aa-0.74□□□□□ -2.53
HMGN3P1-201ENST00000453847 ACACAQ13085 2346 aa-0.75□□□□□ -2.53
HMGN3P1-201ENST00000453847 H3BUA1 57 aa-0.75□□□□□ -2.53
HMGN3P1-201ENST00000453847 S100ZQ8WXG8 99 aa-0.76□□□□□ -2.53
HMGN3P1-201ENST00000453847 CPS1P31327 1500 aa-0.78□□□□□ -2.53
HMGN3P1-201ENST00000453847 MGAM2Q2M2H8 2515 aa-0.78□□□□□ -2.53
HMGN3P1-201ENST00000453847 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.78□□□□□ -2.53
HMGN3P1-201ENST00000453847 A0A0C4DFX4 3053 aa-0.78□□□□□ -2.53
HMGN3P1-201ENST00000453847 A0A1B0GUL6 1792 aa-0.78□□□□□ -2.53
HMGN3P1-201ENST00000453847 CCDC168Q8NDH2 2452 aa-0.78□□□□□ -2.53
HMGN3P1-201ENST00000453847 ERICH3Q5RHP9 1530 aa-0.79□□□□□ -2.54
HMGN3P1-201ENST00000453847 PRXQ9BXM0 1461 aa-0.79□□□□□ -2.54
HMGN3P1-201ENST00000453847 NMES1Q9C002 83 aa-0.79□□□□□ -2.54
HMGN3P1-201ENST00000453847 MAST1Q9Y2H9 1570 aa-0.79□□□□□ -2.54
HMGN3P1-201ENST00000453847 KRTAP19-5Q3LI72 72 aa-0.8□□□□□ -2.54
HMGN3P1-201ENST00000453847 ITPR3Q14573 2671 aa-0.8□□□□□ -2.54
HMGN3P1-201ENST00000453847 SERF2P84101 59 aa-0.82□□□□□ -2.54
HMGN3P1-201ENST00000453847 KRTAP20-2Q3LI61 65 aa-0.82□□□□□ -2.54
HMGN3P1-201ENST00000453847 LINC00308Q8TCZ7 52 aa-0.82□□□□□ -2.54
HMGN3P1-201ENST00000453847 MROH2AA6NES4 1674 aa-0.82□□□□□ -2.54
HMGN3P1-201ENST00000453847 SPTBN5Q9NRC6 3674 aaKnown RBP-0.83□□□□□ -2.54
HMGN3P1-201ENST00000453847 RIF1Q5UIP0 2472 aaKnown RBP-0.83□□□□□ -2.54
HMGN3P1-201ENST00000453847 MMP24-AS1A0A0U1RRL7 71 aa-0.83□□□□□ -2.54
HMGN3P1-201ENST00000453847 NOP10Q9NPE3 64 aaKnown RBP-0.84□□□□□ -2.54
HMGN3P1-201ENST00000453847 DNAH7Q8WXX0 4024 aa-0.84□□□□□ -2.54
HMGN3P1-201ENST00000453847 EFCAB6Q5THR3 1501 aa-0.84□□□□□ -2.54
HMGN3P1-201ENST00000453847 FAM208AQ9UK61 1670 aaKnown RBP-0.85□□□□□ -2.55
HMGN3P1-201ENST00000453847 AGLP35573 1532 aa-0.85□□□□□ -2.55
HMGN3P1-201ENST00000453847 HERC2O95714 4834 aa-0.86□□□□□ -2.55
HMGN3P1-201ENST00000453847 RELNP78509 3460 aa-0.86□□□□□ -2.55
HMGN3P1-201ENST00000453847 TMEM167BQ9NRX6 74 aa-0.86□□□□□ -2.55
HMGN3P1-201ENST00000453847 COL12A1Q99715 3063 aa-0.87□□□□□ -2.55
HMGN3P1-201ENST00000453847 TNP1P09430 55 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms