RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 LINC00846Q9NV44 126 aa8.5□□□□□ -1.05
VCX3B-204ENST00000453306 C21orf62-AS1Q17RA5 79 aa8.49□□□□□ -1.05
VCX3B-204ENST00000453306 SIGMAR1Q99720 223 aa8.48□□□□□ -1.05
VCX3B-204ENST00000453306 NREPQ16612 68 aa8.47□□□□□ -1.05
VCX3B-204ENST00000453306 Q6ZVQ6 151 aa8.46□□□□□ -1.06
VCX3B-204ENST00000453306 DSCR10P59022 87 aa8.45□□□□□ -1.06
VCX3B-204ENST00000453306 IGKV3D-7A0A0C4DH55 119 aa8.43□□□□□ -1.06
VCX3B-204ENST00000453306 KRTAP16-1A8MUX0 517 aa8.42□□□□□ -1.06
VCX3B-204ENST00000453306 J3KT08 172 aa8.42□□□□□ -1.06
VCX3B-204ENST00000453306 A0A1B0GVX0 72 aa8.41□□□□□ -1.06
VCX3B-204ENST00000453306 IGHV6-1A0A0B4J1U7 121 aa8.4□□□□□ -1.06
VCX3B-204ENST00000453306 A8MWP4 228 aa8.4□□□□□ -1.06
VCX3B-204ENST00000453306 CRCT1Q9UGL9 99 aa8.4□□□□□ -1.06
VCX3B-204ENST00000453306 LCE2DQ5TA82 110 aaPredicted RBP8.39□□□□□ -1.07
VCX3B-204ENST00000453306 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
VCX3B-204ENST00000453306 LINC00313P59037 77 aa8.37□□□□□ -1.07
VCX3B-204ENST00000453306 FSIP2Q5CZC0 6907 aa8.37□□□□□ -1.07
VCX3B-204ENST00000453306 RPL37P61927 97 aaKnown RBP8.36□□□□□ -1.07
VCX3B-204ENST00000453306 PRR15Q8IV56 129 aa8.36□□□□□ -1.07
VCX3B-204ENST00000453306 K7EQZ3 153 aa8.35□□□□□ -1.07
VCX3B-204ENST00000453306 BPY2O14599 106 aa8.35□□□□□ -1.07
VCX3B-204ENST00000453306 Q8N9L7 120 aa8.35□□□□□ -1.07
VCX3B-204ENST00000453306 C20orf166-AS1Q96NR2 134 aa8.34□□□□□ -1.07
VCX3B-204ENST00000453306 UBL5Q9BZL1 73 aa8.34□□□□□ -1.07
VCX3B-204ENST00000453306 FAM240AA0A1B0GVK7 77 aa8.33□□□□□ -1.08
VCX3B-204ENST00000453306 A8MUU9 505 aa8.33□□□□□ -1.08
VCX3B-204ENST00000453306 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
VCX3B-204ENST00000453306 C8orf17Q9NRJ1 99 aa8.33□□□□□ -1.08
VCX3B-204ENST00000453306 Q75L30 129 aa8.32□□□□□ -1.08
VCX3B-204ENST00000453306 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
VCX3B-204ENST00000453306 NDUFB1O75438 58 aa8.31□□□□□ -1.08
VCX3B-204ENST00000453306 ACYP1P07311 99 aa8.31□□□□□ -1.08
VCX3B-204ENST00000453306 MMP24-AS1A0A0U1RRL7 71 aa8.3□□□□□ -1.08
VCX3B-204ENST00000453306 Q8N9P0 234 aaPredicted RBP8.24□□□□□ -1.09
VCX3B-204ENST00000453306 CXCL6P80162 114 aa8.23□□□□□ -1.09
VCX3B-204ENST00000453306 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
VCX3B-204ENST00000453306 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
VCX3B-204ENST00000453306 WFDC13Q8IUB5 93 aa8.19□□□□□ -1.1
VCX3B-204ENST00000453306 TMEM254Q8TBM7 123 aa8.19□□□□□ -1.1
VCX3B-204ENST00000453306 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
VCX3B-204ENST00000453306 LINC00643Q86TS7 51 aa8.18□□□□□ -1.1
VCX3B-204ENST00000453306 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
VCX3B-204ENST00000453306 MT1HP80294 61 aa8.17□□□□□ -1.1
VCX3B-204ENST00000453306 J3QR89 54 aa8.16□□□□□ -1.1
VCX3B-204ENST00000453306 KRTAP19-2Q3LHN2 52 aa8.16□□□□□ -1.1
VCX3B-204ENST00000453306 CASC2Q6XLA1 102 aa8.15□□□□□ -1.1
VCX3B-204ENST00000453306 HCG22E2RYF7 251 aa8.14□□□□□ -1.11
VCX3B-204ENST00000453306 ATP5EP2Q5VTU8 51 aa8.12□□□□□ -1.11
VCX3B-204ENST00000453306 ZCCHC13Q8WW36 166 aaKnown RBP8.12□□□□□ -1.11
VCX3B-204ENST00000453306 Q5W150 140 aa8.11□□□□□ -1.11
VCX3B-204ENST00000453306 A0A087WVE0 104 aa8.08□□□□□ -1.12
VCX3B-204ENST00000453306 K7ERU9 68 aa8.08□□□□□ -1.12
VCX3B-204ENST00000453306 M0R2T5 61 aa8.08□□□□□ -1.12
VCX3B-204ENST00000453306 COX6B2Q6YFQ2 88 aa8.07□□□□□ -1.12
VCX3B-204ENST00000453306 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
VCX3B-204ENST00000453306 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
VCX3B-204ENST00000453306 HIST1H4AP62805 103 aaKnown RBP8.06□□□□□ -1.12
VCX3B-204ENST00000453306 NDUFS5O43920 106 aa8.05□□□□□ -1.12
VCX3B-204ENST00000453306 MT-ATP8P03928 68 aa8.02□□□□□ -1.13
VCX3B-204ENST00000453306 HRES1P13985 223 aa8□□□□□ -1.13
VCX3B-204ENST00000453306 SPINK7P58062 85 aa7.99□□□□□ -1.13
VCX3B-204ENST00000453306 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
VCX3B-204ENST00000453306 TP53AIP1Q9HCN2 124 aa7.91□□□□□ -1.14
VCX3B-204ENST00000453306 IMUPQ9GZP8 106 aa7.89□□□□□ -1.15
VCX3B-204ENST00000453306 FLGP20930 4061 aaPredicted RBP7.88□□□□□ -1.15
VCX3B-204ENST00000453306 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
VCX3B-204ENST00000453306 KRTAP9-7A8MTY7 169 aa7.88□□□□□ -1.15
VCX3B-204ENST00000453306 IGKV2-30P06310 120 aa7.88□□□□□ -1.15
VCX3B-204ENST00000453306 OCR1Q9BZK8 76 aa7.88□□□□□ -1.15
VCX3B-204ENST00000453306 UQCRQO14949 82 aa7.84□□□□□ -1.15
VCX3B-204ENST00000453306 C7orf65Q6ZTY9 151 aa7.82□□□□□ -1.16
VCX3B-204ENST00000453306 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.81□□□□□ -1.16
VCX3B-204ENST00000453306 TRAV22A0A0B4J277 110 aa7.8□□□□□ -1.16
VCX3B-204ENST00000453306 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
VCX3B-204ENST00000453306 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
VCX3B-204ENST00000453306 H0Y9P7 68 aa7.78□□□□□ -1.16
VCX3B-204ENST00000453306 CYP4F30PQ9H0H9 118 aa7.78□□□□□ -1.16
VCX3B-204ENST00000453306 RBM12B-AS1Q9P1G2 102 aa7.77□□□□□ -1.17
VCX3B-204ENST00000453306 SCGB1A1P11684 91 aa7.75□□□□□ -1.17
VCX3B-204ENST00000453306 C4orf26Q17RF5 130 aa7.75□□□□□ -1.17
VCX3B-204ENST00000453306 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
VCX3B-204ENST00000453306 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
VCX3B-204ENST00000453306 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
VCX3B-204ENST00000453306 LOC101927531A0A1B0GV80 90 aa7.71□□□□□ -1.18
VCX3B-204ENST00000453306 C1orf64Q8NEQ6 169 aa7.7□□□□□ -1.18
VCX3B-204ENST00000453306 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
VCX3B-204ENST00000453306 C5orf47Q569G3 176 aa7.69□□□□□ -1.18
VCX3B-204ENST00000453306 ATOX1O00244 68 aa7.68□□□□□ -1.18
VCX3B-204ENST00000453306 KRTAP9-8Q9BYQ0 159 aa7.68□□□□□ -1.18
VCX3B-204ENST00000453306 TRAV7A0A075B6U4 112 aa7.67□□□□□ -1.18
VCX3B-204ENST00000453306 KLKP1Q107X0 134 aa7.67□□□□□ -1.18
VCX3B-204ENST00000453306 MP68P56378 58 aa7.64□□□□□ -1.19
VCX3B-204ENST00000453306 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
VCX3B-204ENST00000453306 SMIM20Q8N5G0 67 aa7.61□□□□□ -1.19
VCX3B-204ENST00000453306 SSPOA2VEC9 5147 aa7.6□□□□□ -1.19
VCX3B-204ENST00000453306 H3BPC8 53 aa7.6□□□□□ -1.19
VCX3B-204ENST00000453306 USH2AO75445 5202 aa7.59□□□□□ -1.19
VCX3B-204ENST00000453306 SERP2Q8N6R1 65 aa7.56□□□□□ -1.2
VCX3B-204ENST00000453306 MT2AP02795 61 aa7.54□□□□□ -1.2
VCX3B-204ENST00000453306 FCGBPQ9Y6R7 5405 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms