RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 K7EP34 96 aa7.57□□□□□ -1.2
GTF3C3-206ENST00000448539 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
GTF3C3-206ENST00000448539 PCOTHQ58A44 107 aa7.57□□□□□ -1.2
GTF3C3-206ENST00000448539 GTF2H5Q6ZYL4 71 aa7.55□□□□□ -1.2
GTF3C3-206ENST00000448539 J3KT08 172 aa7.54□□□□□ -1.2
GTF3C3-206ENST00000448539 DSCR10P59022 87 aa7.53□□□□□ -1.2
GTF3C3-206ENST00000448539 LINC00313P59037 77 aa7.53□□□□□ -1.2
GTF3C3-206ENST00000448539 Q75L30 129 aa7.52□□□□□ -1.21
GTF3C3-206ENST00000448539 IGHV6-1A0A0B4J1U7 121 aa7.51□□□□□ -1.21
GTF3C3-206ENST00000448539 NREPQ16612 68 aa7.51□□□□□ -1.21
GTF3C3-206ENST00000448539 ATP11AUNQ6ZP68 121 aa7.51□□□□□ -1.21
GTF3C3-206ENST00000448539 A0A1B0GVX0 72 aa7.49□□□□□ -1.21
GTF3C3-206ENST00000448539 NDUFB1O75438 58 aa7.49□□□□□ -1.21
GTF3C3-206ENST00000448539 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
GTF3C3-206ENST00000448539 PRO0461Q9UI25 63 aa7.49□□□□□ -1.21
GTF3C3-206ENST00000448539 C8orf87E5RJ46 101 aa7.47□□□□□ -1.21
GTF3C3-206ENST00000448539 C20orf166-AS1Q96NR2 134 aa7.47□□□□□ -1.21
GTF3C3-206ENST00000448539 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.22
GTF3C3-206ENST00000448539 A8MUU9 505 aa7.45□□□□□ -1.22
GTF3C3-206ENST00000448539 F8W1H4 67 aa7.45□□□□□ -1.22
GTF3C3-206ENST00000448539 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
GTF3C3-206ENST00000448539 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
GTF3C3-206ENST00000448539 A8MWP4 228 aa7.43□□□□□ -1.22
GTF3C3-206ENST00000448539 KRTAP4-6Q9BYQ5 205 aa7.43□□□□□ -1.22
GTF3C3-206ENST00000448539 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
GTF3C3-206ENST00000448539 IGKV3D-7A0A0C4DH55 119 aa7.39□□□□□ -1.23
GTF3C3-206ENST00000448539 BPY2O14599 106 aa7.38□□□□□ -1.23
GTF3C3-206ENST00000448539 ETDBQ3ZM63 59 aa7.38□□□□□ -1.23
GTF3C3-206ENST00000448539 C8orf17Q9NRJ1 99 aa7.38□□□□□ -1.23
GTF3C3-206ENST00000448539 Q6ZVQ6 151 aa7.37□□□□□ -1.23
GTF3C3-206ENST00000448539 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
GTF3C3-206ENST00000448539 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
GTF3C3-206ENST00000448539 LINC00846Q9NV44 126 aa7.33□□□□□ -1.24
GTF3C3-206ENST00000448539 K7EQZ3 153 aa7.32□□□□□ -1.24
GTF3C3-206ENST00000448539 Q8N9P0 234 aaPredicted RBP7.3□□□□□ -1.24
GTF3C3-206ENST00000448539 MMP24-AS1A0A0U1RRL7 71 aa7.29□□□□□ -1.24
GTF3C3-206ENST00000448539 COX6B2Q6YFQ2 88 aa7.29□□□□□ -1.24
GTF3C3-206ENST00000448539 hDV103S1A0JD37 113 aa7.28□□□□□ -1.24
GTF3C3-206ENST00000448539 TMEM254Q8TBM7 123 aa7.28□□□□□ -1.24
GTF3C3-206ENST00000448539 ZCCHC13Q8WW36 166 aaKnown RBP7.27□□□□□ -1.25
GTF3C3-206ENST00000448539 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
GTF3C3-206ENST00000448539 A0A1B0GV90 55 aa7.26□□□□□ -1.25
GTF3C3-206ENST00000448539 Q8N9L7 120 aa7.26□□□□□ -1.25
GTF3C3-206ENST00000448539 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
GTF3C3-206ENST00000448539 NDUFS5O43920 106 aa7.24□□□□□ -1.25
GTF3C3-206ENST00000448539 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
GTF3C3-206ENST00000448539 ACYP1P07311 99 aa7.22□□□□□ -1.25
GTF3C3-206ENST00000448539 CASC2Q6XLA1 102 aa7.22□□□□□ -1.25
GTF3C3-206ENST00000448539 WFDC13Q8IUB5 93 aa7.22□□□□□ -1.25
GTF3C3-206ENST00000448539 CXCL6P80162 114 aa7.19□□□□□ -1.26
GTF3C3-206ENST00000448539 FAM240AA0A1B0GVK7 77 aa7.18□□□□□ -1.26
GTF3C3-206ENST00000448539 HCG22E2RYF7 251 aa7.17□□□□□ -1.26
GTF3C3-206ENST00000448539 SPINK7P58062 85 aa7.17□□□□□ -1.26
GTF3C3-206ENST00000448539 MT1HP80294 61 aa7.17□□□□□ -1.26
GTF3C3-206ENST00000448539 RBM12B-AS1Q9P1G2 102 aa7.17□□□□□ -1.26
GTF3C3-206ENST00000448539 FAM236DA0A1B0GTK5 79 aa7.16□□□□□ -1.26
GTF3C3-206ENST00000448539 FAM236CP0DP71 79 aa7.16□□□□□ -1.26
GTF3C3-206ENST00000448539 M0R2T5 61 aa7.14□□□□□ -1.27
GTF3C3-206ENST00000448539 H3BS24 57 aa7.13□□□□□ -1.27
GTF3C3-206ENST00000448539 HRES1P13985 223 aa7.13□□□□□ -1.27
GTF3C3-206ENST00000448539 ATP5EP2Q5VTU8 51 aa7.1□□□□□ -1.27
GTF3C3-206ENST00000448539 J3QR89 54 aa7.08□□□□□ -1.28
GTF3C3-206ENST00000448539 MPLKIPQ8TAP9 179 aa7.08□□□□□ -1.28
GTF3C3-206ENST00000448539 Q5W150 140 aa7.07□□□□□ -1.28
GTF3C3-206ENST00000448539 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
GTF3C3-206ENST00000448539 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
GTF3C3-206ENST00000448539 HIST1H4AP62805 103 aaKnown RBP7.05□□□□□ -1.28
GTF3C3-206ENST00000448539 LINC00643Q86TS7 51 aa7.05□□□□□ -1.28
GTF3C3-206ENST00000448539 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
GTF3C3-206ENST00000448539 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
GTF3C3-206ENST00000448539 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
GTF3C3-206ENST00000448539 FLGP20930 4061 aaPredicted RBP7.02□□□□□ -1.29
GTF3C3-206ENST00000448539 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
GTF3C3-206ENST00000448539 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
GTF3C3-206ENST00000448539 A0A087WVE0 104 aa6.93□□□□□ -1.3
GTF3C3-206ENST00000448539 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
GTF3C3-206ENST00000448539 TRAV22A0A0B4J277 110 aa6.9□□□□□ -1.3
GTF3C3-206ENST00000448539 UQCRQO14949 82 aa6.89□□□□□ -1.31
GTF3C3-206ENST00000448539 C4orf26Q17RF5 130 aa6.89□□□□□ -1.31
GTF3C3-206ENST00000448539 H1FX-AS1Q4G0G2 97 aa6.89□□□□□ -1.31
GTF3C3-206ENST00000448539 K7ERU9 68 aa6.88□□□□□ -1.31
GTF3C3-206ENST00000448539 LOC101927531A0A1B0GV80 90 aa6.85□□□□□ -1.31
GTF3C3-206ENST00000448539 ATOX1O00244 68 aa6.84□□□□□ -1.31
GTF3C3-206ENST00000448539 H0Y9P7 68 aa6.83□□□□□ -1.32
GTF3C3-206ENST00000448539 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
GTF3C3-206ENST00000448539 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
GTF3C3-206ENST00000448539 SCGB1A1P11684 91 aa6.8□□□□□ -1.32
GTF3C3-206ENST00000448539 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
GTF3C3-206ENST00000448539 KRTAP4-12Q9BQ66 201 aa6.78□□□□□ -1.32
GTF3C3-206ENST00000448539 MP68P56378 58 aa6.77□□□□□ -1.33
GTF3C3-206ENST00000448539 OCR1Q9BZK8 76 aa6.77□□□□□ -1.33
GTF3C3-206ENST00000448539 IMUPQ9GZP8 106 aa6.77□□□□□ -1.33
GTF3C3-206ENST00000448539 MT-ATP8P03928 68 aa6.75□□□□□ -1.33
GTF3C3-206ENST00000448539 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-206ENST00000448539 MT2AP02795 61 aa6.74□□□□□ -1.33
GTF3C3-206ENST00000448539 C5orf47Q569G3 176 aa6.74□□□□□ -1.33
GTF3C3-206ENST00000448539 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
GTF3C3-206ENST00000448539 LINC00208Q96KT6 92 aa6.74□□□□□ -1.33
GTF3C3-206ENST00000448539 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
GTF3C3-206ENST00000448539 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms