RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 SPINK6Q6UWN8 80 aa12.19□□□□□ -0.46
SMARCD2-203ENST00000448276 APLNQ9ULZ1 77 aa12.19□□□□□ -0.46
SMARCD2-203ENST00000448276 WWC2-AS2Q96NR7 200 aa12.17□□□□□ -0.46
SMARCD2-203ENST00000448276 PLECQ15149 4684 aaKnown RBP12.14□□□□□ -0.47
SMARCD2-203ENST00000448276 LINC00483Q53H64 154 aa12.13□□□□□ -0.47
SMARCD2-203ENST00000448276 DNHD1Q96M86 4753 aa12.12□□□□□ -0.47
SMARCD2-203ENST00000448276 C7orf65Q6ZTY9 151 aa12.12□□□□□ -0.47
SMARCD2-203ENST00000448276 SPACA4Q8TDM5 124 aa12.12□□□□□ -0.47
SMARCD2-203ENST00000448276 DNAH8Q96JB1 4490 aa12.11□□□□□ -0.47
SMARCD2-203ENST00000448276 PSORS1C2Q9UIG4 136 aa12.1□□□□□ -0.47
SMARCD2-203ENST00000448276 NBDYA0A0U1RRE5 68 aa12.09□□□□□ -0.47
SMARCD2-203ENST00000448276 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
SMARCD2-203ENST00000448276 RETNLBQ9BQ08 111 aa12.05□□□□□ -0.48
SMARCD2-203ENST00000448276 KRTAP13-3Q3SY46 172 aa12.03□□□□□ -0.48
SMARCD2-203ENST00000448276 HECTD4Q9Y4D8 3996 aa12.02□□□□□ -0.49
SMARCD2-203ENST00000448276 DYNC2H1Q8NCM8 4307 aaKnown RBP12.02□□□□□ -0.49
SMARCD2-203ENST00000448276 PRAC1Q96KF2 57 aa12.01□□□□□ -0.49
SMARCD2-203ENST00000448276 ZNF706Q9Y5V0 76 aaPredicted RBP12.01□□□□□ -0.49
SMARCD2-203ENST00000448276 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
SMARCD2-203ENST00000448276 IGLV5-52A0A0A0MRZ9 124 aa12□□□□□ -0.49
SMARCD2-203ENST00000448276 CIRBP-AS1Q8TBR5 109 aa12□□□□□ -0.49
SMARCD2-203ENST00000448276 ADM2Q7Z4H4 148 aa11.97□□□□□ -0.49
SMARCD2-203ENST00000448276 STARD9Q9P2P6 4700 aa11.96□□□□□ -0.49
SMARCD2-203ENST00000448276 ZNF861PO60384 105 aa11.96□□□□□ -0.49
SMARCD2-203ENST00000448276 ACYP2P14621 99 aa11.96□□□□□ -0.49
SMARCD2-203ENST00000448276 PRKDCP78527 4128 aaKnown RBP11.96□□□□□ -0.49
SMARCD2-203ENST00000448276 LINC00313P59037 77 aa11.96□□□□□ -0.49
SMARCD2-203ENST00000448276 NUPR2A6NF83 97 aa11.92□□□□□ -0.5
SMARCD2-203ENST00000448276 A0A087WTM6 91 aa11.92□□□□□ -0.5
SMARCD2-203ENST00000448276 DNAH17Q9UFH2 4485 aa11.9□□□□□ -0.5
SMARCD2-203ENST00000448276 RTL8CO15255 209 aa11.9□□□□□ -0.5
SMARCD2-203ENST00000448276 MEGF8Q7Z7M0 2845 aa11.87□□□□□ -0.51
SMARCD2-203ENST00000448276 DMAC1Q96GE9 116 aa11.87□□□□□ -0.51
SMARCD2-203ENST00000448276 KMT2AQ03164 3969 aa11.86□□□□□ -0.51
SMARCD2-203ENST00000448276 A0A1B0GU69 56 aa11.86□□□□□ -0.51
SMARCD2-203ENST00000448276 FBN3Q75N90 2809 aa11.82□□□□□ -0.52
SMARCD2-203ENST00000448276 VPS13DQ5THJ4 4388 aa11.82□□□□□ -0.52
SMARCD2-203ENST00000448276 DNAH2Q9P225 4427 aa11.81□□□□□ -0.52
SMARCD2-203ENST00000448276 TGP01266 2768 aa11.79□□□□□ -0.52
SMARCD2-203ENST00000448276 IGLV7-43P04211 117 aa11.78□□□□□ -0.52
SMARCD2-203ENST00000448276 C8orf87E5RJ46 101 aa11.74□□□□□ -0.53
SMARCD2-203ENST00000448276 IGKV2-30P06310 120 aa11.73□□□□□ -0.53
SMARCD2-203ENST00000448276 FAM229AH3BQW9 127 aa11.73□□□□□ -0.53
SMARCD2-203ENST00000448276 SPATA8Q6RVD6 105 aa11.73□□□□□ -0.53
SMARCD2-203ENST00000448276 PLA2G1BP04054 148 aaKnown RBP11.71□□□□□ -0.54
SMARCD2-203ENST00000448276 MIR22HGQ0VDD5 57 aa11.71□□□□□ -0.54
SMARCD2-203ENST00000448276 IGKV2D-30A0A075B6S6 120 aa11.7□□□□□ -0.54
SMARCD2-203ENST00000448276 DNAH6Q9C0G6 4158 aa11.69□□□□□ -0.54
SMARCD2-203ENST00000448276 UQCR11O14957 56 aa11.65□□□□□ -0.55
SMARCD2-203ENST00000448276 SSBP3-AS1Q7Z2R9 100 aa11.65□□□□□ -0.55
SMARCD2-203ENST00000448276 DNAH11Q96DT5 4516 aa11.63□□□□□ -0.55
SMARCD2-203ENST00000448276 KRTAP13-2Q52LG2 175 aa11.62□□□□□ -0.55
SMARCD2-203ENST00000448276 KRTAP16-1A8MUX0 517 aa11.61□□□□□ -0.55
SMARCD2-203ENST00000448276 LY6G6CO95867 125 aa11.59□□□□□ -0.55
SMARCD2-203ENST00000448276 SPINK1P00995 79 aa11.59□□□□□ -0.55
SMARCD2-203ENST00000448276 LINC01554Q52M75 96 aa11.58□□□□□ -0.56
SMARCD2-203ENST00000448276 C1orf134Q5TEV5 83 aa11.56□□□□□ -0.56
SMARCD2-203ENST00000448276 CSAG1Q6PB30 78 aa11.52□□□□□ -0.56
SMARCD2-203ENST00000448276 Q8N1X5 172 aa11.5□□□□□ -0.57
SMARCD2-203ENST00000448276 DNAH5Q8TE73 4624 aa11.49□□□□□ -0.57
SMARCD2-203ENST00000448276 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
SMARCD2-203ENST00000448276 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
SMARCD2-203ENST00000448276 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
SMARCD2-203ENST00000448276 C4orf48Q5BLP8 95 aa11.35□□□□□ -0.59
SMARCD2-203ENST00000448276 KRTAP1-4P0C5Y4 121 aa11.35□□□□□ -0.59
SMARCD2-203ENST00000448276 VPS13BQ7Z7G8 4022 aa11.33□□□□□ -0.6
SMARCD2-203ENST00000448276 KRTAP10-1P60331 282 aa11.3□□□□□ -0.6
SMARCD2-203ENST00000448276 Q6ZSA8 131 aa11.29□□□□□ -0.6
SMARCD2-203ENST00000448276 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
SMARCD2-203ENST00000448276 H0YAA0 97 aa11.27□□□□□ -0.61
SMARCD2-203ENST00000448276 PKD1P98161 4303 aa11.24□□□□□ -0.61
SMARCD2-203ENST00000448276 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
SMARCD2-203ENST00000448276 H3BS24 57 aa11.2□□□□□ -0.62
SMARCD2-203ENST00000448276 A8MUU9 505 aa11.17□□□□□ -0.62
SMARCD2-203ENST00000448276 FLG2Q5D862 2391 aaPredicted RBP11.16□□□□□ -0.62
SMARCD2-203ENST00000448276 LINC00304Q8N9R0 145 aa11.15□□□□□ -0.62
SMARCD2-203ENST00000448276 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
SMARCD2-203ENST00000448276 KRTAP21-3Q3LHN1 58 aa11.11□□□□□ -0.63
SMARCD2-203ENST00000448276 KRTAP3-1Q9BYR8 98 aa11.11□□□□□ -0.63
SMARCD2-203ENST00000448276 A0A1B0GU33 70 aa11.09□□□□□ -0.63
SMARCD2-203ENST00000448276 CRIPTQ9P021 101 aa11.09□□□□□ -0.63
SMARCD2-203ENST00000448276 PKHD1P08F94 4074 aa11.07□□□□□ -0.64
SMARCD2-203ENST00000448276 KRTAP25-1Q3LHN0 102 aa11.05□□□□□ -0.64
SMARCD2-203ENST00000448276 H1FX-AS1Q4G0G2 97 aa11.02□□□□□ -0.64
SMARCD2-203ENST00000448276 SACSQ9NZJ4 4579 aa11□□□□□ -0.65
SMARCD2-203ENST00000448276 SMR3BP02814 79 aaPredicted RBP10.89□□□□□ -0.67
SMARCD2-203ENST00000448276 C20orf166-AS1Q96NR2 134 aa10.88□□□□□ -0.67
SMARCD2-203ENST00000448276 ROMO1P60602 79 aa10.88□□□□□ -0.67
SMARCD2-203ENST00000448276 KMT2CQ8NEZ4 4911 aaKnown RBP10.88□□□□□ -0.67
SMARCD2-203ENST00000448276 COX6B2Q6YFQ2 88 aa10.86□□□□□ -0.67
SMARCD2-203ENST00000448276 DYNC1H1Q14204 4646 aaKnown RBP10.84□□□□□ -0.67
SMARCD2-203ENST00000448276 FAT1Q14517 4588 aa10.81□□□□□ -0.68
SMARCD2-203ENST00000448276 RPS29P62273 56 aaKnown RBP10.79□□□□□ -0.68
SMARCD2-203ENST00000448276 K7ERS5 55 aa10.75□□□□□ -0.69
SMARCD2-203ENST00000448276 DMBT1Q9UGM3 2413 aaPredicted RBP10.71□□□□□ -0.7
SMARCD2-203ENST00000448276 A0A0D9SG42 100 aa10.7□□□□□ -0.7
SMARCD2-203ENST00000448276 PKHD1L1Q86WI1 4243 aa10.69□□□□□ -0.7
SMARCD2-203ENST00000448276 RYR2Q92736 4967 aa10.68□□□□□ -0.7
SMARCD2-203ENST00000448276 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
SMARCD2-203ENST00000448276 P0C880 135 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms