RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PDE6GP18545 87 aa6.35□□□□□ -1.39
RFC4-208ENST00000447345 IGHV6-1A0A0B4J1U7 121 aa6.34□□□□□ -1.39
RFC4-208ENST00000447345 Q75L30 129 aa6.34□□□□□ -1.39
RFC4-208ENST00000447345 K7EP34 96 aa6.33□□□□□ -1.4
RFC4-208ENST00000447345 LINC00313P59037 77 aa6.32□□□□□ -1.4
RFC4-208ENST00000447345 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
RFC4-208ENST00000447345 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
RFC4-208ENST00000447345 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
RFC4-208ENST00000447345 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
RFC4-208ENST00000447345 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
RFC4-208ENST00000447345 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
RFC4-208ENST00000447345 A0A1B0GW54 56 aa6.29□□□□□ -1.4
RFC4-208ENST00000447345 A8MUU9 505 aa6.29□□□□□ -1.4
RFC4-208ENST00000447345 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
RFC4-208ENST00000447345 J3KT08 172 aa6.29□□□□□ -1.4
RFC4-208ENST00000447345 PRO0461Q9UI25 63 aa6.28□□□□□ -1.4
RFC4-208ENST00000447345 NREPQ16612 68 aa6.27□□□□□ -1.41
RFC4-208ENST00000447345 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
RFC4-208ENST00000447345 GTF2H5Q6ZYL4 71 aa6.26□□□□□ -1.41
RFC4-208ENST00000447345 NDUFB1O75438 58 aa6.25□□□□□ -1.41
RFC4-208ENST00000447345 A8MWP4 228 aa6.24□□□□□ -1.41
RFC4-208ENST00000447345 IGKV3D-7A0A0C4DH55 119 aa6.22□□□□□ -1.41
RFC4-208ENST00000447345 KRTAP19-2Q3LHN2 52 aa6.22□□□□□ -1.41
RFC4-208ENST00000447345 C8orf17Q9NRJ1 99 aa6.21□□□□□ -1.42
RFC4-208ENST00000447345 Q6ZVQ6 151 aa6.2□□□□□ -1.42
RFC4-208ENST00000447345 K7EQZ3 153 aa6.19□□□□□ -1.42
RFC4-208ENST00000447345 COX6B2Q6YFQ2 88 aa6.19□□□□□ -1.42
RFC4-208ENST00000447345 F8W1H4 67 aa6.18□□□□□ -1.42
RFC4-208ENST00000447345 BPY2O14599 106 aa6.18□□□□□ -1.42
RFC4-208ENST00000447345 PRR15Q8IV56 129 aa6.18□□□□□ -1.42
RFC4-208ENST00000447345 ETDBQ3ZM63 59 aa6.17□□□□□ -1.42
RFC4-208ENST00000447345 MMP24-AS1A0A0U1RRL7 71 aa6.15□□□□□ -1.42
RFC4-208ENST00000447345 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
RFC4-208ENST00000447345 Q8N9L7 120 aa6.15□□□□□ -1.42
RFC4-208ENST00000447345 LINC00846Q9NV44 126 aa6.15□□□□□ -1.42
RFC4-208ENST00000447345 MT1HP80294 61 aa6.14□□□□□ -1.43
RFC4-208ENST00000447345 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
RFC4-208ENST00000447345 ZCCHC13Q8WW36 166 aaKnown RBP6.13□□□□□ -1.43
RFC4-208ENST00000447345 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
RFC4-208ENST00000447345 TMEM254Q8TBM7 123 aa6.12□□□□□ -1.43
RFC4-208ENST00000447345 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
RFC4-208ENST00000447345 hDV103S1A0JD37 113 aa6.1□□□□□ -1.43
RFC4-208ENST00000447345 NDUFS5O43920 106 aa6.1□□□□□ -1.43
RFC4-208ENST00000447345 WFDC13Q8IUB5 93 aa6.1□□□□□ -1.43
RFC4-208ENST00000447345 A0A1B0GV90 55 aa6.08□□□□□ -1.44
RFC4-208ENST00000447345 M0R2T5 61 aa6.08□□□□□ -1.44
RFC4-208ENST00000447345 FLGP20930 4061 aaPredicted RBP6.07□□□□□ -1.44
RFC4-208ENST00000447345 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
RFC4-208ENST00000447345 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
RFC4-208ENST00000447345 HRES1P13985 223 aa6.06□□□□□ -1.44
RFC4-208ENST00000447345 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
RFC4-208ENST00000447345 SPINK7P58062 85 aa6.05□□□□□ -1.44
RFC4-208ENST00000447345 HCG22E2RYF7 251 aa6.02□□□□□ -1.45
RFC4-208ENST00000447345 RBM12B-AS1Q9P1G2 102 aa6.02□□□□□ -1.45
RFC4-208ENST00000447345 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
RFC4-208ENST00000447345 KRTAP10-6P60371 365 aaPredicted RBP5.99□□□□□ -1.45
RFC4-208ENST00000447345 CXCL6P80162 114 aa5.99□□□□□ -1.45
RFC4-208ENST00000447345 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
RFC4-208ENST00000447345 FAM240AA0A1B0GVK7 77 aa5.97□□□□□ -1.45
RFC4-208ENST00000447345 ACYP1P07311 99 aa5.97□□□□□ -1.45
RFC4-208ENST00000447345 Q5W150 140 aa5.97□□□□□ -1.45
RFC4-208ENST00000447345 IGKV2D-30A0A075B6S6 120 aa5.96□□□□□ -1.46
RFC4-208ENST00000447345 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
RFC4-208ENST00000447345 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
RFC4-208ENST00000447345 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
RFC4-208ENST00000447345 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
RFC4-208ENST00000447345 ATP5EP2Q5VTU8 51 aa5.91□□□□□ -1.46
RFC4-208ENST00000447345 HIST1H4AP62805 103 aaKnown RBP5.9□□□□□ -1.46
RFC4-208ENST00000447345 LINC00643Q86TS7 51 aa5.86□□□□□ -1.47
RFC4-208ENST00000447345 TP53AIP1Q9HCN2 124 aa5.86□□□□□ -1.47
RFC4-208ENST00000447345 A0A087WVE0 104 aa5.85□□□□□ -1.47
RFC4-208ENST00000447345 J3QR89 54 aa5.83□□□□□ -1.48
RFC4-208ENST00000447345 C4orf26Q17RF5 130 aa5.83□□□□□ -1.48
RFC4-208ENST00000447345 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
RFC4-208ENST00000447345 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
RFC4-208ENST00000447345 TRAV22A0A0B4J277 110 aa5.79□□□□□ -1.48
RFC4-208ENST00000447345 H3BS24 57 aa5.78□□□□□ -1.48
RFC4-208ENST00000447345 MT2AP02795 61 aa5.78□□□□□ -1.48
RFC4-208ENST00000447345 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
RFC4-208ENST00000447345 H0Y9P7 68 aa5.74□□□□□ -1.49
RFC4-208ENST00000447345 UQCRQO14949 82 aa5.74□□□□□ -1.49
RFC4-208ENST00000447345 MT1FP04733 61 aa5.74□□□□□ -1.49
RFC4-208ENST00000447345 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
RFC4-208ENST00000447345 KRTAP9-6A0A140TA67 174 aa5.72□□□□□ -1.49
RFC4-208ENST00000447345 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
RFC4-208ENST00000447345 C1orf64Q8NEQ6 169 aa5.72□□□□□ -1.49
RFC4-208ENST00000447345 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
RFC4-208ENST00000447345 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
RFC4-208ENST00000447345 ATOX1O00244 68 aa5.69□□□□□ -1.5
RFC4-208ENST00000447345 K7ERU9 68 aa5.68□□□□□ -1.5
RFC4-208ENST00000447345 OCR1Q9BZK8 76 aa5.67□□□□□ -1.5
RFC4-208ENST00000447345 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
RFC4-208ENST00000447345 S4R3F8 94 aa5.67□□□□□ -1.5
RFC4-208ENST00000447345 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
RFC4-208ENST00000447345 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
RFC4-208ENST00000447345 MT-ATP8P03928 68 aa5.65□□□□□ -1.5
RFC4-208ENST00000447345 SCGB1A1P11684 91 aa5.64□□□□□ -1.51
RFC4-208ENST00000447345 MP68P56378 58 aa5.64□□□□□ -1.51
RFC4-208ENST00000447345 LCA10Q71F78 164 aa5.63□□□□□ -1.51
RFC4-208ENST00000447345 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms