RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 FBN1P35555 2871 aaKnown RBP4.67□□□□□ -1.66
SMG1-202ENST00000446231 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
SMG1-202ENST00000446231 CELSR1Q9NYQ6 3014 aa4.66□□□□□ -1.66
SMG1-202ENST00000446231 XIRP2A4UGR9 3374 aa4.65□□□□□ -1.66
SMG1-202ENST00000446231 KRTAP24-1Q3LI83 254 aa4.64□□□□□ -1.67
SMG1-202ENST00000446231 PANO1I0J062 215 aa4.64□□□□□ -1.67
SMG1-202ENST00000446231 PLAC8Q9NZF1 115 aa4.64□□□□□ -1.67
SMG1-202ENST00000446231 KRTAP7-1Q8IUC3 87 aa4.63□□□□□ -1.67
SMG1-202ENST00000446231 BRCA2P51587 3418 aa4.63□□□□□ -1.67
SMG1-202ENST00000446231 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
SMG1-202ENST00000446231 UNC80Q8N2C7 3258 aa4.63□□□□□ -1.67
SMG1-202ENST00000446231 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
SMG1-202ENST00000446231 MYO15AQ9UKN7 3530 aa4.62□□□□□ -1.67
SMG1-202ENST00000446231 COL7A1Q02388 2944 aa4.61□□□□□ -1.67
SMG1-202ENST00000446231 KRTAP11-1Q8IUC1 163 aa4.59□□□□□ -1.67
SMG1-202ENST00000446231 ALMS1Q8TCU4 4167 aa4.59□□□□□ -1.67
SMG1-202ENST00000446231 WWC2-AS2Q96NR7 200 aa4.59□□□□□ -1.68
SMG1-202ENST00000446231 KRTAP1-5Q9BYS1 174 aa4.59□□□□□ -1.68
SMG1-202ENST00000446231 COL6A3P12111 3177 aa4.57□□□□□ -1.68
SMG1-202ENST00000446231 FBN3Q75N90 2809 aa4.57□□□□□ -1.68
SMG1-202ENST00000446231 CELSR3Q9NYQ7 3312 aa4.56□□□□□ -1.68
SMG1-202ENST00000446231 A8MUU9 505 aa4.56□□□□□ -1.68
SMG1-202ENST00000446231 DNAH14Q0VDD8 3507 aa4.56□□□□□ -1.68
SMG1-202ENST00000446231 CMYA5Q8N3K9 4069 aa4.54□□□□□ -1.68
SMG1-202ENST00000446231 TRRAPQ9Y4A5 3859 aa4.51□□□□□ -1.69
SMG1-202ENST00000446231 S4R3F8 94 aa4.51□□□□□ -1.69
SMG1-202ENST00000446231 KRTAP13-1Q8IUC0 172 aa4.48□□□□□ -1.69
SMG1-202ENST00000446231 VCANP13611 3396 aa4.48□□□□□ -1.69
SMG1-202ENST00000446231 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
SMG1-202ENST00000446231 Q6ZSA8 131 aa4.47□□□□□ -1.69
SMG1-202ENST00000446231 COX6B2Q6YFQ2 88 aa4.46□□□□□ -1.7
SMG1-202ENST00000446231 SMR3BP02814 79 aaPredicted RBP4.44□□□□□ -1.7
SMG1-202ENST00000446231 C20orf166-AS1Q96NR2 134 aa4.44□□□□□ -1.7
SMG1-202ENST00000446231 H0YAA0 97 aa4.42□□□□□ -1.7
SMG1-202ENST00000446231 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
SMG1-202ENST00000446231 KRTAP10-1P60331 282 aa4.42□□□□□ -1.7
SMG1-202ENST00000446231 OTOGQ6ZRI0 2925 aa4.41□□□□□ -1.7
SMG1-202ENST00000446231 DMDP11532 3685 aa4.41□□□□□ -1.7
SMG1-202ENST00000446231 SPENQ96T58 3664 aaKnown RBP4.4□□□□□ -1.7
SMG1-202ENST00000446231 CDH23Q9H251 3354 aa4.4□□□□□ -1.71
SMG1-202ENST00000446231 EYSQ5T1H1 3165 aa4.38□□□□□ -1.71
SMG1-202ENST00000446231 SMG1Q96Q15 3661 aaKnown RBP4.37□□□□□ -1.71
SMG1-202ENST00000446231 DNAH3Q8TD57 4116 aa4.36□□□□□ -1.71
SMG1-202ENST00000446231 M0QZ58 72 aa4.35□□□□□ -1.71
SMG1-202ENST00000446231 VPS13CQ709C8 3753 aa4.35□□□□□ -1.71
SMG1-202ENST00000446231 KRTAP13-2Q52LG2 175 aa4.35□□□□□ -1.71
SMG1-202ENST00000446231 DNAH11Q96DT5 4516 aa4.34□□□□□ -1.71
SMG1-202ENST00000446231 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
SMG1-202ENST00000446231 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.72
SMG1-202ENST00000446231 LAMA5O15230 3695 aa4.32□□□□□ -1.72
SMG1-202ENST00000446231 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
SMG1-202ENST00000446231 KRTAP10-2P60368 255 aa4.31□□□□□ -1.72
SMG1-202ENST00000446231 Q6ZRN7 208 aaPredicted RBP4.31□□□□□ -1.72
SMG1-202ENST00000446231 P0C880 135 aa4.3□□□□□ -1.72
SMG1-202ENST00000446231 R4GN34 69 aa4.3□□□□□ -1.72
SMG1-202ENST00000446231 ANK2Q01484 3957 aa4.29□□□□□ -1.72
SMG1-202ENST00000446231 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
SMG1-202ENST00000446231 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
SMG1-202ENST00000446231 USP34Q70CQ2 3546 aa4.28□□□□□ -1.72
SMG1-202ENST00000446231 BSNQ9UPA5 3926 aa4.27□□□□□ -1.73
SMG1-202ENST00000446231 ANK3Q12955 4377 aaKnown RBP4.26□□□□□ -1.73
SMG1-202ENST00000446231 DNAH7Q8WXX0 4024 aa4.26□□□□□ -1.73
SMG1-202ENST00000446231 RPS29P62273 56 aaKnown RBP4.25□□□□□ -1.73
SMG1-202ENST00000446231 DNAH1Q9P2D7 4330 aa4.25□□□□□ -1.73
SMG1-202ENST00000446231 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
SMG1-202ENST00000446231 SZT2Q5T011 3432 aa4.24□□□□□ -1.73
SMG1-202ENST00000446231 DCHS1Q96JQ0 3298 aa4.22□□□□□ -1.73
SMG1-202ENST00000446231 DNAH10Q8IVF4 4471 aa4.21□□□□□ -1.74
SMG1-202ENST00000446231 HUWE1Q7Z6Z7 4374 aaKnown RBP4.2□□□□□ -1.74
SMG1-202ENST00000446231 TPRXLQ17RH7 258 aa4.2□□□□□ -1.74
SMG1-202ENST00000446231 SPEGQ15772 3267 aa4.19□□□□□ -1.74
SMG1-202ENST00000446231 LYSTQ99698 3801 aa4.18□□□□□ -1.74
SMG1-202ENST00000446231 LOC400499M0QZD8 3231 aa4.18□□□□□ -1.74
SMG1-202ENST00000446231 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
SMG1-202ENST00000446231 J3QL48 77 aa4.18□□□□□ -1.74
SMG1-202ENST00000446231 WDFY3Q8IZQ1 3526 aa4.13□□□□□ -1.75
SMG1-202ENST00000446231 ZNF469Q96JG9 3925 aaPredicted RBP4.11□□□□□ -1.75
SMG1-202ENST00000446231 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
SMG1-202ENST00000446231 DNAH6Q9C0G6 4158 aa4.1□□□□□ -1.75
SMG1-202ENST00000446231 KRTAP1-4P0C5Y4 121 aa4.08□□□□□ -1.76
SMG1-202ENST00000446231 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
SMG1-202ENST00000446231 KRTAP10-8P60410 259 aa4.06□□□□□ -1.76
SMG1-202ENST00000446231 FRAS1Q86XX4 4008 aa4.05□□□□□ -1.76
SMG1-202ENST00000446231 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
SMG1-202ENST00000446231 SVEP1Q4LDE5 3571 aa4.03□□□□□ -1.76
SMG1-202ENST00000446231 TNP1P09430 55 aa4.03□□□□□ -1.77
SMG1-202ENST00000446231 KRTAP3-1Q9BYR8 98 aa4.02□□□□□ -1.77
SMG1-202ENST00000446231 RELNP78509 3460 aa4.02□□□□□ -1.77
SMG1-202ENST00000446231 Q5VSD8 79 aa4.02□□□□□ -1.77
SMG1-202ENST00000446231 CSMD1Q96PZ7 3565 aa4.01□□□□□ -1.77
SMG1-202ENST00000446231 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
SMG1-202ENST00000446231 ZFHX4Q86UP3 3567 aa3.99□□□□□ -1.77
SMG1-202ENST00000446231 VPS13DQ5THJ4 4388 aa3.99□□□□□ -1.77
SMG1-202ENST00000446231 M0R2T5 61 aa3.99□□□□□ -1.77
SMG1-202ENST00000446231 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
SMG1-202ENST00000446231 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
SMG1-202ENST00000446231 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
SMG1-202ENST00000446231 PLECQ15149 4684 aaKnown RBP3.95□□□□□ -1.78
SMG1-202ENST00000446231 XP32Q5T750 250 aa3.93□□□□□ -1.78
SMG1-202ENST00000446231 ASPMQ8IZT6 3477 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms