RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ATOX1O00244 68 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 UQCR11O14957 56 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 NDUFC1O43677 76 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 SFT2D2O95562 160 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 IGLC1P0CG04 106 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 TRAPPC2P0DI81 140 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 TRAPPC2BP0DI82 140 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 CFAP126Q5VTH2 177 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 SFTA2Q6UW10 78 aa1.32□□□□□ -2.2
HMGB1P48-201ENST00000446155 GCHFRP30047 84 aa1.31□□□□□ -2.2
HMGB1P48-201ENST00000446155 HEPN1Q6WQI6 88 aa1.31□□□□□ -2.2
HMGB1P48-201ENST00000446155 SMIM4Q8WVI0 70 aa1.31□□□□□ -2.2
HMGB1P48-201ENST00000446155 PRR15LQ9BU68 103 aa1.31□□□□□ -2.2
HMGB1P48-201ENST00000446155 NXT2Q9NPJ8 142 aaKnown RBP1.31□□□□□ -2.2
HMGB1P48-201ENST00000446155 SERP2Q8N6R1 65 aa1.3□□□□□ -2.2
HMGB1P48-201ENST00000446155 ARL2-SNX15V9GYD0 113 aa1.3□□□□□ -2.2
HMGB1P48-201ENST00000446155 NEBP20929 6669 aa1.3□□□□□ -2.2
HMGB1P48-201ENST00000446155 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
HMGB1P48-201ENST00000446155 TRBV7-7A0A0K0K1E9 115 aa1.29□□□□□ -2.2
HMGB1P48-201ENST00000446155 APOC3P02656 99 aa1.29□□□□□ -2.2
HMGB1P48-201ENST00000446155 TRGV9Q99603 122 aa1.29□□□□□ -2.2
HMGB1P48-201ENST00000446155 FAUP35544 74 aaKnown RBP1.28□□□□□ -2.2
HMGB1P48-201ENST00000446155 RPL38P63173 70 aaKnown RBP1.28□□□□□ -2.2
HMGB1P48-201ENST00000446155 COX17Q14061 63 aa1.28□□□□□ -2.2
HMGB1P48-201ENST00000446155 FAM223AQ8IWN6 122 aa1.28□□□□□ -2.2
HMGB1P48-201ENST00000446155 LEAP2Q969E1 77 aa1.28□□□□□ -2.2
HMGB1P48-201ENST00000446155 NPVFQ9HCQ7 196 aa1.28□□□□□ -2.2
HMGB1P48-201ENST00000446155 CACFD1Q9UGQ2 172 aa1.28□□□□□ -2.2
HMGB1P48-201ENST00000446155 A0A0G2JND7 137 aa1.27□□□□□ -2.21
HMGB1P48-201ENST00000446155 SPART-AS1P0CW21 52 aa1.27□□□□□ -2.21
HMGB1P48-201ENST00000446155 KRTAP20-1Q3LI63 56 aa1.27□□□□□ -2.21
HMGB1P48-201ENST00000446155 USMG5Q96IX5 58 aa1.27□□□□□ -2.21
HMGB1P48-201ENST00000446155 LINC01600Q96MT4 127 aa1.27□□□□□ -2.21
HMGB1P48-201ENST00000446155 PRO1933Q9H354 126 aa1.27□□□□□ -2.21
HMGB1P48-201ENST00000446155 A0A0D9SG42 100 aa1.26□□□□□ -2.21
HMGB1P48-201ENST00000446155 H3BQF6 201 aa1.26□□□□□ -2.21
HMGB1P48-201ENST00000446155 H3BUA1 57 aa1.26□□□□□ -2.21
HMGB1P48-201ENST00000446155 SYS1-DBNDD2H3BUS1 97 aa1.26□□□□□ -2.21
HMGB1P48-201ENST00000446155 HTN3P15516 51 aa1.26□□□□□ -2.21
HMGB1P48-201ENST00000446155 PYY3Q5JQD4 70 aa1.26□□□□□ -2.21
HMGB1P48-201ENST00000446155 FAM103A1Q9BTL3 118 aaKnown RBP1.26□□□□□ -2.21
HMGB1P48-201ENST00000446155 KMT2DO14686 5537 aa1.26□□□□□ -2.21
HMGB1P48-201ENST00000446155 CPSF4LA6NMK7 179 aaKnown RBP1.25□□□□□ -2.21
HMGB1P48-201ENST00000446155 H7BZZ5 65 aa1.25□□□□□ -2.21
HMGB1P48-201ENST00000446155 NDUFA3O95167 84 aa1.25□□□□□ -2.21
HMGB1P48-201ENST00000446155 SAA2P0DJI9 122 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P48-201ENST00000446155 DEFA5Q01523 94 aa1.25□□□□□ -2.21
HMGB1P48-201ENST00000446155 LINC00472Q9H8W2 130 aa1.25□□□□□ -2.21
HMGB1P48-201ENST00000446155 MUC12Q9UKN1 5478 aa1.24□□□□□ -2.21
HMGB1P48-201ENST00000446155 FAM223BA6NKX1 122 aa1.24□□□□□ -2.21
HMGB1P48-201ENST00000446155 K7EP34 96 aa1.24□□□□□ -2.21
HMGB1P48-201ENST00000446155 M0R3E3 92 aa1.24□□□□□ -2.21
HMGB1P48-201ENST00000446155 MGPP08493 103 aa1.24□□□□□ -2.21
HMGB1P48-201ENST00000446155 RPS27P42677 84 aaKnown RBP1.24□□□□□ -2.21
HMGB1P48-201ENST00000446155 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
HMGB1P48-201ENST00000446155 TRBV25-1A0A075B6N4 114 aa1.23□□□□□ -2.21
HMGB1P48-201ENST00000446155 S100A3P33764 101 aa1.23□□□□□ -2.21
HMGB1P48-201ENST00000446155 PLGLAQ15195 96 aa1.23□□□□□ -2.21
HMGB1P48-201ENST00000446155 PMCHL1Q16048 86 aa1.23□□□□□ -2.21
HMGB1P48-201ENST00000446155 C20orf78Q9BR46 151 aa1.23□□□□□ -2.21
HMGB1P48-201ENST00000446155 MACF1Q9UPN3 7388 aaKnown RBP1.22□□□□□ -2.21
HMGB1P48-201ENST00000446155 CYB5AP00167 134 aa1.22□□□□□ -2.21
HMGB1P48-201ENST00000446155 PRH1P02810 166 aa1.22□□□□□ -2.21
HMGB1P48-201ENST00000446155 DEFB131AP59861 70 aa1.22□□□□□ -2.21
HMGB1P48-201ENST00000446155 SPRR4Q96PI1 79 aa1.22□□□□□ -2.21
HMGB1P48-201ENST00000446155 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
HMGB1P48-201ENST00000446155 NMBP08949 121 aa1.21□□□□□ -2.22
HMGB1P48-201ENST00000446155 APELAP0DMC3 54 aa1.21□□□□□ -2.22
HMGB1P48-201ENST00000446155 PEA15Q15121 130 aa1.21□□□□□ -2.22
HMGB1P48-201ENST00000446155 C10orf95Q9H7T3 257 aa1.21□□□□□ -2.22
HMGB1P48-201ENST00000446155 DEFB130BP0DP73 79 aa1.2□□□□□ -2.22
HMGB1P48-201ENST00000446155 DEFB130AP0DP74 79 aa1.2□□□□□ -2.22
HMGB1P48-201ENST00000446155 PSMG4Q5JS54 123 aa1.2□□□□□ -2.22
HMGB1P48-201ENST00000446155 S100A16Q96FQ6 103 aaKnown RBP1.2□□□□□ -2.22
HMGB1P48-201ENST00000446155 RHPN1-AS1Q9BWJ2 59 aa1.2□□□□□ -2.22
HMGB1P48-201ENST00000446155 ZNF815PA8K554 130 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 H3BNG1 76 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 KRTAP2-3P0C7H8 128 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 MT1HP80294 61 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 WFDC2Q14508 124 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 KLK9Q2XQG4 91 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 TDRG1Q3Y452 100 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 Q6JHZ5 121 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 KRTAP2-4Q9BYR9 128 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 RABAC1Q9UI14 185 aa1.19□□□□□ -2.22
HMGB1P48-201ENST00000446155 A0A096LPF7 62 aa1.18□□□□□ -2.22
HMGB1P48-201ENST00000446155 NDUFA4O00483 81 aa1.18□□□□□ -2.22
HMGB1P48-201ENST00000446155 BCE1O60756 84 aa1.18□□□□□ -2.22
HMGB1P48-201ENST00000446155 TMEM263Q8WUH6 116 aaKnown RBP1.18□□□□□ -2.22
HMGB1P48-201ENST00000446155 C7orf77A4D0Y5 90 aa1.17□□□□□ -2.22
HMGB1P48-201ENST00000446155 SMIM11AP58511 58 aa1.17□□□□□ -2.22
HMGB1P48-201ENST00000446155 KRTAP19-2Q3LHN2 52 aa1.17□□□□□ -2.22
HMGB1P48-201ENST00000446155 RPL39P5Q59GN2 51 aa1.17□□□□□ -2.22
HMGB1P48-201ENST00000446155 LINC01590Q5TEZ4 76 aa1.17□□□□□ -2.22
HMGB1P48-201ENST00000446155 SPINK6Q6UWN8 80 aa1.17□□□□□ -2.22
HMGB1P48-201ENST00000446155 HIGD1BQ9P298 99 aa1.17□□□□□ -2.22
HMGB1P48-201ENST00000446155 FLGP20930 4061 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P48-201ENST00000446155 ETDBQ3ZM63 59 aa1.16□□□□□ -2.22
HMGB1P48-201ENST00000446155 SSBP3-AS1Q7Z2R9 100 aa1.16□□□□□ -2.22
HMGB1P48-201ENST00000446155 S100A13Q99584 98 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms