RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 FBN3Q75N90 2809 aa8.47□□□□□ -1.05
ERCC3-203ENST00000445889 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
ERCC3-203ENST00000445889 HECTD4Q9Y4D8 3996 aa8.46□□□□□ -1.05
ERCC3-203ENST00000445889 HRES1P13985 223 aa8.46□□□□□ -1.06
ERCC3-203ENST00000445889 Q6ZR54 194 aa8.46□□□□□ -1.06
ERCC3-203ENST00000445889 DNAH2Q9P225 4427 aa8.46□□□□□ -1.06
ERCC3-203ENST00000445889 LOC101927531A0A1B0GV80 90 aa8.46□□□□□ -1.06
ERCC3-203ENST00000445889 Q5W150 140 aa8.45□□□□□ -1.06
ERCC3-203ENST00000445889 RETNLBQ9BQ08 111 aa8.45□□□□□ -1.06
ERCC3-203ENST00000445889 MEGF8Q7Z7M0 2845 aa8.44□□□□□ -1.06
ERCC3-203ENST00000445889 A0A087WTM6 91 aa8.44□□□□□ -1.06
ERCC3-203ENST00000445889 CIRBP-AS1Q8TBR5 109 aa8.44□□□□□ -1.06
ERCC3-203ENST00000445889 RTL8CO15255 209 aa8.43□□□□□ -1.06
ERCC3-203ENST00000445889 PRR26Q8N8Z3 221 aa8.43□□□□□ -1.06
ERCC3-203ENST00000445889 DYNC2H1Q8NCM8 4307 aaKnown RBP8.43□□□□□ -1.06
ERCC3-203ENST00000445889 IGLV5-52A0A0A0MRZ9 124 aa8.42□□□□□ -1.06
ERCC3-203ENST00000445889 LINC00483Q53H64 154 aa8.42□□□□□ -1.06
ERCC3-203ENST00000445889 SPINK7P58062 85 aa8.41□□□□□ -1.06
ERCC3-203ENST00000445889 VPS13DQ5THJ4 4388 aa8.41□□□□□ -1.06
ERCC3-203ENST00000445889 PRKDCP78527 4128 aaKnown RBP8.4□□□□□ -1.06
ERCC3-203ENST00000445889 ATP11AUNQ6ZP68 121 aa8.4□□□□□ -1.06
ERCC3-203ENST00000445889 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
ERCC3-203ENST00000445889 ZNF861PO60384 105 aa8.39□□□□□ -1.07
ERCC3-203ENST00000445889 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
ERCC3-203ENST00000445889 ZNF706Q9Y5V0 76 aaPredicted RBP8.38□□□□□ -1.07
ERCC3-203ENST00000445889 DNAH6Q9C0G6 4158 aa8.37□□□□□ -1.07
ERCC3-203ENST00000445889 KTN1-AS1Q86SY8 53 aa8.36□□□□□ -1.07
ERCC3-203ENST00000445889 NUPR2A6NF83 97 aa8.35□□□□□ -1.07
ERCC3-203ENST00000445889 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.07
ERCC3-203ENST00000445889 A6NN06 94 aa8.33□□□□□ -1.08
ERCC3-203ENST00000445889 DNAH11Q96DT5 4516 aa8.29□□□□□ -1.08
ERCC3-203ENST00000445889 RBM12B-AS1Q9P1G2 102 aa8.29□□□□□ -1.08
ERCC3-203ENST00000445889 ALMS1Q8TCU4 4167 aa8.28□□□□□ -1.08
ERCC3-203ENST00000445889 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
ERCC3-203ENST00000445889 KRTAP13-3Q3SY46 172 aa8.26□□□□□ -1.09
ERCC3-203ENST00000445889 ACYP2P14621 99 aa8.24□□□□□ -1.09
ERCC3-203ENST00000445889 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
ERCC3-203ENST00000445889 LY6G6CO95867 125 aa8.23□□□□□ -1.09
ERCC3-203ENST00000445889 LINC00313P59037 77 aa8.2□□□□□ -1.1
ERCC3-203ENST00000445889 KRTAP10-2P60368 255 aa8.2□□□□□ -1.1
ERCC3-203ENST00000445889 C1orf134Q5TEV5 83 aa8.2□□□□□ -1.1
ERCC3-203ENST00000445889 C7orf65Q6ZTY9 151 aa8.19□□□□□ -1.1
ERCC3-203ENST00000445889 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
ERCC3-203ENST00000445889 DNHD1Q96M86 4753 aa8.17□□□□□ -1.1
ERCC3-203ENST00000445889 IGKV2D-30A0A075B6S6 120 aa8.16□□□□□ -1.1
ERCC3-203ENST00000445889 IGKV2-30P06310 120 aa8.16□□□□□ -1.1
ERCC3-203ENST00000445889 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
ERCC3-203ENST00000445889 DMAC1Q96GE9 116 aa8.15□□□□□ -1.1
ERCC3-203ENST00000445889 A0A1B0GU69 56 aa8.14□□□□□ -1.11
ERCC3-203ENST00000445889 PRAC1Q96KF2 57 aa8.14□□□□□ -1.11
ERCC3-203ENST00000445889 C8orf87E5RJ46 101 aa8.13□□□□□ -1.11
ERCC3-203ENST00000445889 SSBP3-AS1Q7Z2R9 100 aa8.13□□□□□ -1.11
ERCC3-203ENST00000445889 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
ERCC3-203ENST00000445889 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
ERCC3-203ENST00000445889 HYDINQ4G0P3 5121 aa8.09□□□□□ -1.11
ERCC3-203ENST00000445889 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
ERCC3-203ENST00000445889 SPINK1P00995 79 aa8.07□□□□□ -1.12
ERCC3-203ENST00000445889 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
ERCC3-203ENST00000445889 KRTAP10-1P60331 282 aa8.06□□□□□ -1.12
ERCC3-203ENST00000445889 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
ERCC3-203ENST00000445889 MIR22HGQ0VDD5 57 aa8.01□□□□□ -1.13
ERCC3-203ENST00000445889 Q8N1X5 172 aa8.01□□□□□ -1.13
ERCC3-203ENST00000445889 UQCR11O14957 56 aa7.99□□□□□ -1.13
ERCC3-203ENST00000445889 PLA2G1BP04054 148 aaKnown RBP7.99□□□□□ -1.13
ERCC3-203ENST00000445889 KRTAP1-4P0C5Y4 121 aa7.98□□□□□ -1.13
ERCC3-203ENST00000445889 SPATA8Q6RVD6 105 aa7.98□□□□□ -1.13
ERCC3-203ENST00000445889 PKD1P98161 4303 aa7.97□□□□□ -1.13
ERCC3-203ENST00000445889 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
ERCC3-203ENST00000445889 PKHD1P08F94 4074 aa7.93□□□□□ -1.14
ERCC3-203ENST00000445889 TYMSOSQ8TAI1 123 aa7.93□□□□□ -1.14
ERCC3-203ENST00000445889 Q6ZSA8 131 aa7.88□□□□□ -1.15
ERCC3-203ENST00000445889 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
ERCC3-203ENST00000445889 SMR3BP02814 79 aaPredicted RBP7.86□□□□□ -1.15
ERCC3-203ENST00000445889 FAT1Q14517 4588 aa7.85□□□□□ -1.15
ERCC3-203ENST00000445889 CSAG1Q6PB30 78 aa7.82□□□□□ -1.16
ERCC3-203ENST00000445889 LINC01554Q52M75 96 aa7.82□□□□□ -1.16
ERCC3-203ENST00000445889 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
ERCC3-203ENST00000445889 LINC00304Q8N9R0 145 aa7.77□□□□□ -1.17
ERCC3-203ENST00000445889 H0YAA0 97 aa7.71□□□□□ -1.18
ERCC3-203ENST00000445889 KRTAP3-1Q9BYR8 98 aa7.7□□□□□ -1.18
ERCC3-203ENST00000445889 DYNC1H1Q14204 4646 aaKnown RBP7.69□□□□□ -1.18
ERCC3-203ENST00000445889 SACSQ9NZJ4 4579 aa7.67□□□□□ -1.18
ERCC3-203ENST00000445889 A0A1B0GU33 70 aa7.64□□□□□ -1.19
ERCC3-203ENST00000445889 DMBT1Q9UGM3 2413 aaPredicted RBP7.63□□□□□ -1.19
ERCC3-203ENST00000445889 CRIPTQ9P021 101 aa7.63□□□□□ -1.19
ERCC3-203ENST00000445889 A8MUU9 505 aa7.61□□□□□ -1.19
ERCC3-203ENST00000445889 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
ERCC3-203ENST00000445889 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
ERCC3-203ENST00000445889 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
ERCC3-203ENST00000445889 LRP1Q07954 4544 aaKnown RBP7.56□□□□□ -1.2
ERCC3-203ENST00000445889 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
ERCC3-203ENST00000445889 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
ERCC3-203ENST00000445889 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
ERCC3-203ENST00000445889 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
ERCC3-203ENST00000445889 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
ERCC3-203ENST00000445889 HSPG2P98160 4391 aa7.47□□□□□ -1.21
ERCC3-203ENST00000445889 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.22
ERCC3-203ENST00000445889 H3BS24 57 aa7.45□□□□□ -1.22
ERCC3-203ENST00000445889 A0A0D9SG42 100 aa7.43□□□□□ -1.22
ERCC3-203ENST00000445889 KMT2CQ8NEZ4 4911 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms