RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 CRCT1Q9UGL9 99 aa1.91□□□□□ -2.1
LINC01004-201ENST00000445184 PLECQ15149 4684 aaKnown RBP1.91□□□□□ -2.1
LINC01004-201ENST00000445184 STARD9Q9P2P6 4700 aa1.9□□□□□ -2.1
LINC01004-201ENST00000445184 CR1P17927 2039 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 PRM2P04554 102 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 MGPP08493 103 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 RNASE3P12724 160 aaKnown RBP1.9□□□□□ -2.11
LINC01004-201ENST00000445184 C10orf55Q5SWW7 151 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 FAM74A4Q5TZK3 123 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 Q8N814 137 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 WFDC9Q8NEX5 89 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 SMIM11BQ8TCY0 68 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 ZCCHC13Q8WW36 166 aaKnown RBP1.9□□□□□ -2.11
LINC01004-201ENST00000445184 C20orf166-AS1Q96NR2 134 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 CDC42SE2Q9NRR3 84 aa1.9□□□□□ -2.11
LINC01004-201ENST00000445184 DNAH10Q8IVF4 4471 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 DNAH3Q8TD57 4116 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 ALMS1Q8TCU4 4167 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 IGHV3-64A0A075B6Q5 118 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 TRBV10-1A0A0K0K1A3 114 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 CHKB-CPT1BH3BT56 60 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 HAMPP81172 84 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 C9orf116Q5BN46 136 aaPredicted RBP1.89□□□□□ -2.11
LINC01004-201ENST00000445184 LEAP2Q969E1 77 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 Q9BRP9 147 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 TNCP24821 2201 aa1.89□□□□□ -2.11
LINC01004-201ENST00000445184 HUWE1Q7Z6Z7 4374 aaKnown RBP1.88□□□□□ -2.11
LINC01004-201ENST00000445184 ARFGEF3Q5TH69 2177 aa1.88□□□□□ -2.11
LINC01004-201ENST00000445184 TRBV6-4A0A1B0GX49 114 aa1.88□□□□□ -2.11
LINC01004-201ENST00000445184 SPTSSBQ8NFR3 76 aa1.88□□□□□ -2.11
LINC01004-201ENST00000445184 GAFA1Q96PS6 74 aa1.88□□□□□ -2.11
LINC01004-201ENST00000445184 XAGE1AQ9HD64 81 aa1.88□□□□□ -2.11
LINC01004-201ENST00000445184 CDKN2A-AS1Q9UH64 79 aa1.88□□□□□ -2.11
LINC01004-201ENST00000445184 FSIP2Q5CZC0 6907 aa1.88□□□□□ -2.11
LINC01004-201ENST00000445184 HSPG2P98160 4391 aa1.88□□□□□ -2.11
LINC01004-201ENST00000445184 CLPSL1A2RUU4 121 aa1.87□□□□□ -2.11
LINC01004-201ENST00000445184 Q6ZTI0 123 aa1.87□□□□□ -2.11
LINC01004-201ENST00000445184 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
LINC01004-201ENST00000445184 MINOS1-NBL1R4GNA1 71 aa1.87□□□□□ -2.11
LINC01004-201ENST00000445184 DNAH11Q96DT5 4516 aa1.87□□□□□ -2.11
LINC01004-201ENST00000445184 MYCBP2O75592 4640 aa1.87□□□□□ -2.11
LINC01004-201ENST00000445184 IGLV3-9A0A075B6K5 115 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.86□□□□□ -2.11
LINC01004-201ENST00000445184 TFF1P04155 84 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 IGKV4-1P06312 121 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 CCL18P55774 89 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 CNBPP62633 177 aaKnown RBP1.86□□□□□ -2.11
LINC01004-201ENST00000445184 LINC00575Q6W349 94 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 CASC2Q6XLA1 102 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 PLAC8Q9NZF1 115 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 KAAG1Q9UBP8 84 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
LINC01004-201ENST00000445184 DYNC1H1Q14204 4646 aaKnown RBP1.86□□□□□ -2.11
LINC01004-201ENST00000445184 TRGV2A0A075B6R0 118 aa1.85□□□□□ -2.11
LINC01004-201ENST00000445184 ETDCA0A1B0GVM5 59 aa1.85□□□□□ -2.11
LINC01004-201ENST00000445184 COX7BP24311 80 aa1.85□□□□□ -2.11
LINC01004-201ENST00000445184 Q8NDZ9 215 aa1.85□□□□□ -2.11
LINC01004-201ENST00000445184 LINC00208Q96KT6 92 aa1.85□□□□□ -2.11
LINC01004-201ENST00000445184 PRR15LQ9BU68 103 aa1.85□□□□□ -2.11
LINC01004-201ENST00000445184 KCNQ1DNQ9H478 68 aa1.85□□□□□ -2.11
LINC01004-201ENST00000445184 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
LINC01004-201ENST00000445184 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
LINC01004-201ENST00000445184 FAT2Q9NYQ8 4349 aa1.84□□□□□ -2.11
LINC01004-201ENST00000445184 A0A096LNT2 108 aa1.84□□□□□ -2.11
LINC01004-201ENST00000445184 COX6A2Q02221 97 aa1.84□□□□□ -2.11
LINC01004-201ENST00000445184 COX17Q14061 63 aa1.84□□□□□ -2.11
LINC01004-201ENST00000445184 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.84□□□□□ -2.11
LINC01004-201ENST00000445184 COX7B2Q8TF08 81 aa1.84□□□□□ -2.11
LINC01004-201ENST00000445184 NDUFA4O00483 81 aa1.83□□□□□ -2.12
LINC01004-201ENST00000445184 APELAP0DMC3 54 aa1.83□□□□□ -2.12
LINC01004-201ENST00000445184 CCL3L1P16619 93 aa1.83□□□□□ -2.12
LINC01004-201ENST00000445184 LINC00158P58513 81 aa1.83□□□□□ -2.12
LINC01004-201ENST00000445184 MINOS1Q5TGZ0 78 aa1.83□□□□□ -2.12
LINC01004-201ENST00000445184 RETNLBQ9BQ08 111 aa1.83□□□□□ -2.12
LINC01004-201ENST00000445184 DEFB108BQ8NET1 73 aa1.82□□□□□ -2.12
LINC01004-201ENST00000445184 LINC00467Q9BRT7 94 aa1.82□□□□□ -2.12
LINC01004-201ENST00000445184 TTTY12Q9BZ98 90 aa1.82□□□□□ -2.12
LINC01004-201ENST00000445184 M0R2N4 97 aa1.81□□□□□ -2.12
LINC01004-201ENST00000445184 TPRXLQ17RH7 258 aa1.81□□□□□ -2.12
LINC01004-201ENST00000445184 WFDC10AQ9H1F0 79 aa1.81□□□□□ -2.12
LINC01004-201ENST00000445184 K7EIL1 84 aa1.8□□□□□ -2.12
LINC01004-201ENST00000445184 IGLV1-51P01701 117 aa1.8□□□□□ -2.12
LINC01004-201ENST00000445184 Q8IZM0 81 aa1.8□□□□□ -2.12
LINC01004-201ENST00000445184 C9orf163Q8N9P6 203 aa1.8□□□□□ -2.12
LINC01004-201ENST00000445184 LRP2P98164 4655 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 IGLV5-48A0A075B6I7 105 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 A8MTW9 85 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 H3BUA1 57 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 SPAG11BQ08648 103 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 BRD3OSQ6XYD6 125 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 Q6ZQY7 126 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 COA5Q86WW8 74 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 DEFB104AQ8WTQ1 72 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 USMG5Q96IX5 58 aa1.79□□□□□ -2.12
LINC01004-201ENST00000445184 APOBP04114 4563 aaKnown RBP1.79□□□□□ -2.12
LINC01004-201ENST00000445184 DNAH6Q9C0G6 4158 aa1.78□□□□□ -2.12
LINC01004-201ENST00000445184 H0Y9P7 68 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms