RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ATP11AUNQ6ZP68 121 aa12.74□□□□□ -0.37
C9orf3-207ENST00000445181 IGHV6-1A0A0B4J1U7 121 aa12.72□□□□□ -0.37
C9orf3-207ENST00000445181 J3KT08 172 aa12.7□□□□□ -0.38
C9orf3-207ENST00000445181 C20orf166-AS1Q96NR2 134 aa12.69□□□□□ -0.38
C9orf3-207ENST00000445181 A8MUU9 505 aa12.66□□□□□ -0.38
C9orf3-207ENST00000445181 A0A1B0GVX0 72 aa12.65□□□□□ -0.38
C9orf3-207ENST00000445181 K7EP34 96 aa12.65□□□□□ -0.38
C9orf3-207ENST00000445181 LCE2CQ5TA81 110 aa12.64□□□□□ -0.39
C9orf3-207ENST00000445181 NOTCH2NLQ7Z3S9 236 aa12.64□□□□□ -0.39
C9orf3-207ENST00000445181 NREPQ16612 68 aa12.62□□□□□ -0.39
C9orf3-207ENST00000445181 C8orf87E5RJ46 101 aa12.61□□□□□ -0.39
C9orf3-207ENST00000445181 NDUFB1O75438 58 aa12.61□□□□□ -0.39
C9orf3-207ENST00000445181 SMCPP49901 116 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-207ENST00000445181 KRTAP19-2Q3LHN2 52 aa12.6□□□□□ -0.39
C9orf3-207ENST00000445181 KRTAP16-1A8MUX0 517 aa12.59□□□□□ -0.39
C9orf3-207ENST00000445181 GTF2H5Q6ZYL4 71 aa12.57□□□□□ -0.4
C9orf3-207ENST00000445181 PRO0461Q9UI25 63 aa12.55□□□□□ -0.4
C9orf3-207ENST00000445181 A8MWP4 228 aa12.54□□□□□ -0.4
C9orf3-207ENST00000445181 IGKV3D-7A0A0C4DH55 119 aa12.48□□□□□ -0.41
C9orf3-207ENST00000445181 MT1HP80294 61 aa12.48□□□□□ -0.41
C9orf3-207ENST00000445181 C8orf17Q9NRJ1 99 aa12.46□□□□□ -0.41
C9orf3-207ENST00000445181 COX6B2Q6YFQ2 88 aa12.45□□□□□ -0.42
C9orf3-207ENST00000445181 PRR15Q8IV56 129 aa12.44□□□□□ -0.42
C9orf3-207ENST00000445181 F8W1H4 67 aa12.43□□□□□ -0.42
C9orf3-207ENST00000445181 KRTAP9-6A0A140TA67 174 aa12.42□□□□□ -0.42
C9orf3-207ENST00000445181 BPY2O14599 106 aa12.42□□□□□ -0.42
C9orf3-207ENST00000445181 LCE2DQ5TA82 110 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-207ENST00000445181 Q6ZVQ6 151 aa12.4□□□□□ -0.42
C9orf3-207ENST00000445181 K7EQZ3 153 aa12.37□□□□□ -0.43
C9orf3-207ENST00000445181 ETDBQ3ZM63 59 aa12.34□□□□□ -0.43
C9orf3-207ENST00000445181 Q8N9P0 234 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-207ENST00000445181 UBL5Q9BZL1 73 aa12.33□□□□□ -0.44
C9orf3-207ENST00000445181 MMP24-AS1A0A0U1RRL7 71 aa12.32□□□□□ -0.44
C9orf3-207ENST00000445181 ZCCHC13Q8WW36 166 aaKnown RBP12.32□□□□□ -0.44
C9orf3-207ENST00000445181 LINC00846Q9NV44 126 aa12.32□□□□□ -0.44
C9orf3-207ENST00000445181 M0R2T5 61 aa12.28□□□□□ -0.44
C9orf3-207ENST00000445181 TMEM254Q8TBM7 123 aa12.28□□□□□ -0.44
C9orf3-207ENST00000445181 hDV103S1A0JD37 113 aa12.27□□□□□ -0.45
C9orf3-207ENST00000445181 MRPL34Q9BQ48 92 aaKnown RBP12.27□□□□□ -0.45
C9orf3-207ENST00000445181 Q8N9L7 120 aa12.26□□□□□ -0.45
C9orf3-207ENST00000445181 LORP23490 312 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-207ENST00000445181 KRTAP10-6P60371 365 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-207ENST00000445181 NDUFS5O43920 106 aa12.22□□□□□ -0.45
C9orf3-207ENST00000445181 FLGP20930 4061 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-207ENST00000445181 WFDC13Q8IUB5 93 aa12.18□□□□□ -0.46
C9orf3-207ENST00000445181 FAM236DA0A1B0GTK5 79 aa12.17□□□□□ -0.46
C9orf3-207ENST00000445181 FAM236CP0DP71 79 aa12.17□□□□□ -0.46
C9orf3-207ENST00000445181 RBM12B-AS1Q9P1G2 102 aa12.17□□□□□ -0.46
C9orf3-207ENST00000445181 CASC2Q6XLA1 102 aa12.16□□□□□ -0.46
C9orf3-207ENST00000445181 HRES1P13985 223 aa12.15□□□□□ -0.46
C9orf3-207ENST00000445181 SPINK7P58062 85 aa12.15□□□□□ -0.46
C9orf3-207ENST00000445181 CRCT1Q9UGL9 99 aa12.12□□□□□ -0.47
C9orf3-207ENST00000445181 A0A1B0GV90 55 aa12.08□□□□□ -0.48
C9orf3-207ENST00000445181 MPLKIPQ8TAP9 179 aa12.08□□□□□ -0.48
C9orf3-207ENST00000445181 HCG22E2RYF7 251 aa12.07□□□□□ -0.48
C9orf3-207ENST00000445181 CXCL6P80162 114 aa12.06□□□□□ -0.48
C9orf3-207ENST00000445181 ACYP1P07311 99 aa12.05□□□□□ -0.48
C9orf3-207ENST00000445181 FSIP2Q5CZC0 6907 aa12.05□□□□□ -0.48
C9orf3-207ENST00000445181 FAM240AA0A1B0GVK7 77 aa11.98□□□□□ -0.49
C9orf3-207ENST00000445181 Q5W150 140 aa11.97□□□□□ -0.49
C9orf3-207ENST00000445181 IGKV2D-30A0A075B6S6 120 aa11.94□□□□□ -0.5
C9orf3-207ENST00000445181 IGKV2-30P06310 120 aa11.94□□□□□ -0.5
C9orf3-207ENST00000445181 C7orf65Q6ZTY9 151 aa11.89□□□□□ -0.51
C9orf3-207ENST00000445181 ATP5EP2Q5VTU8 51 aa11.88□□□□□ -0.51
C9orf3-207ENST00000445181 TP53AIP1Q9HCN2 124 aa11.83□□□□□ -0.52
C9orf3-207ENST00000445181 HIST1H4AP62805 103 aaKnown RBP11.81□□□□□ -0.52
C9orf3-207ENST00000445181 KRTAP9-8Q9BYQ0 159 aa11.81□□□□□ -0.52
C9orf3-207ENST00000445181 LINC00643Q86TS7 51 aa11.76□□□□□ -0.53
C9orf3-207ENST00000445181 J3QR89 54 aa11.73□□□□□ -0.53
C9orf3-207ENST00000445181 H1FX-AS1Q4G0G2 97 aa11.69□□□□□ -0.54
C9orf3-207ENST00000445181 C4orf26Q17RF5 130 aa11.67□□□□□ -0.54
C9orf3-207ENST00000445181 A0A087WVE0 104 aa11.64□□□□□ -0.55
C9orf3-207ENST00000445181 MT2AP02795 61 aa11.63□□□□□ -0.55
C9orf3-207ENST00000445181 TRAV22A0A0B4J277 110 aa11.61□□□□□ -0.55
C9orf3-207ENST00000445181 UQCRQO14949 82 aa11.55□□□□□ -0.56
C9orf3-207ENST00000445181 MT1FP04733 61 aa11.53□□□□□ -0.56
C9orf3-207ENST00000445181 LOC101927531A0A1B0GV80 90 aa11.52□□□□□ -0.57
C9orf3-207ENST00000445181 CYP4F30PQ9H0H9 118 aa11.52□□□□□ -0.57
C9orf3-207ENST00000445181 KRTAP10-10P60014 251 aa11.51□□□□□ -0.57
C9orf3-207ENST00000445181 C1orf64Q8NEQ6 169 aa11.5□□□□□ -0.57
C9orf3-207ENST00000445181 H0Y9P7 68 aa11.49□□□□□ -0.57
C9orf3-207ENST00000445181 ATOX1O00244 68 aa11.47□□□□□ -0.57
C9orf3-207ENST00000445181 KRTAP9-3Q9BYQ3 159 aa11.44□□□□□ -0.58
C9orf3-207ENST00000445181 KRTAP3-1Q9BYR8 98 aa11.44□□□□□ -0.58
C9orf3-207ENST00000445181 USH2AO75445 5202 aa11.43□□□□□ -0.58
C9orf3-207ENST00000445181 K7ERU9 68 aa11.4□□□□□ -0.58
C9orf3-207ENST00000445181 LCE2BO14633 110 aa11.4□□□□□ -0.58
C9orf3-207ENST00000445181 S4R3F8 94 aa11.39□□□□□ -0.59
C9orf3-207ENST00000445181 OCR1Q9BZK8 76 aa11.37□□□□□ -0.59
C9orf3-207ENST00000445181 SCGB1A1P11684 91 aa11.35□□□□□ -0.59
C9orf3-207ENST00000445181 MP68P56378 58 aa11.34□□□□□ -0.59
C9orf3-207ENST00000445181 C5orf47Q569G3 176 aa11.34□□□□□ -0.59
C9orf3-207ENST00000445181 LINC00208Q96KT6 92 aa11.33□□□□□ -0.6
C9orf3-207ENST00000445181 SSPOA2VEC9 5147 aa11.31□□□□□ -0.6
C9orf3-207ENST00000445181 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-207ENST00000445181 LCA10Q71F78 164 aa11.28□□□□□ -0.6
C9orf3-207ENST00000445181 MT-ATP8P03928 68 aa11.26□□□□□ -0.61
C9orf3-207ENST00000445181 IMUPQ9GZP8 106 aa11.26□□□□□ -0.61
C9orf3-207ENST00000445181 CSAG1Q6PB30 78 aa11.25□□□□□ -0.61
C9orf3-207ENST00000445181 KRTAP19-1Q8IUB9 90 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms