RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
HDAC8-215ENST00000444609 ZNF625Q96I27 306 aaPredicted RBP4.76□□□□□ -1.65
HDAC8-215ENST00000444609 V9GYY9 64 aa4.76□□□□□ -1.65
HDAC8-215ENST00000444609 A0A0J9YXY3 114 aa4.75□□□□□ -1.65
HDAC8-215ENST00000444609 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
HDAC8-215ENST00000444609 A0A1B0GX51 115 aa4.74□□□□□ -1.65
HDAC8-215ENST00000444609 IFITM1P13164 125 aa4.74□□□□□ -1.65
HDAC8-215ENST00000444609 HRES1P13985 223 aa4.74□□□□□ -1.65
HDAC8-215ENST00000444609 COPS9Q8WXC6 57 aa4.74□□□□□ -1.65
HDAC8-215ENST00000444609 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
HDAC8-215ENST00000444609 SFTA2Q6UW10 78 aa4.73□□□□□ -1.65
HDAC8-215ENST00000444609 MUSTN1Q8IVN3 82 aa4.73□□□□□ -1.65
HDAC8-215ENST00000444609 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
HDAC8-215ENST00000444609 IGLV5-39A0A0G2JS06 123 aa4.72□□□□□ -1.65
HDAC8-215ENST00000444609 A0A0U1RRA0 63 aa4.72□□□□□ -1.65
HDAC8-215ENST00000444609 H3BMG7 143 aa4.72□□□□□ -1.65
HDAC8-215ENST00000444609 MT1BP07438 61 aa4.72□□□□□ -1.65
HDAC8-215ENST00000444609 LITAFQ99732 161 aa4.72□□□□□ -1.65
HDAC8-215ENST00000444609 PRO0461Q9UI25 63 aa4.72□□□□□ -1.65
HDAC8-215ENST00000444609 J3KT08 172 aa4.71□□□□□ -1.66
HDAC8-215ENST00000444609 SCGB1C2P0DMR2 95 aa4.71□□□□□ -1.66
HDAC8-215ENST00000444609 LINC00158P58513 81 aa4.71□□□□□ -1.66
HDAC8-215ENST00000444609 Q96NJ1 140 aa4.71□□□□□ -1.66
HDAC8-215ENST00000444609 A8MUU9 505 aa4.7□□□□□ -1.66
HDAC8-215ENST00000444609 TCL1BO95988 128 aa4.7□□□□□ -1.66
HDAC8-215ENST00000444609 PSMB2P49721 201 aa4.7□□□□□ -1.66
HDAC8-215ENST00000444609 PRO0628Q9UI54 55 aa4.7□□□□□ -1.66
HDAC8-215ENST00000444609 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
HDAC8-215ENST00000444609 COX6CP09669 75 aa4.69□□□□□ -1.66
HDAC8-215ENST00000444609 ATXN8Q156A1 80 aa4.68□□□□□ -1.66
HDAC8-215ENST00000444609 ETDBQ3ZM63 59 aa4.68□□□□□ -1.66
HDAC8-215ENST00000444609 ADAMTSL4-AS1Q5T5F5 129 aa4.68□□□□□ -1.66
HDAC8-215ENST00000444609 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
HDAC8-215ENST00000444609 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
HDAC8-215ENST00000444609 EIF4EBP3O60516 100 aaPredicted RBP4.67□□□□□ -1.66
HDAC8-215ENST00000444609 GHRHP01286 108 aa4.66□□□□□ -1.66
HDAC8-215ENST00000444609 LINC00308Q8TCZ7 52 aa4.66□□□□□ -1.66
HDAC8-215ENST00000444609 TRIAP1O43715 76 aa4.65□□□□□ -1.67
HDAC8-215ENST00000444609 MEIG1Q5JSS6 88 aa4.65□□□□□ -1.67
HDAC8-215ENST00000444609 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.67
HDAC8-215ENST00000444609 TEN1Q86WV5 123 aa4.65□□□□□ -1.67
HDAC8-215ENST00000444609 PPDPFLQ8WWR9 84 aa4.65□□□□□ -1.67
HDAC8-215ENST00000444609 TRBV10-2A0A0K0K1G8 114 aa4.64□□□□□ -1.67
HDAC8-215ENST00000444609 ANKRD29Q8N6D5 301 aa4.64□□□□□ -1.67
HDAC8-215ENST00000444609 TRAV13-2A0A0B4J235 113 aa4.63□□□□□ -1.67
HDAC8-215ENST00000444609 C9JAW5 83 aa4.63□□□□□ -1.67
HDAC8-215ENST00000444609 H3BT86 120 aa4.63□□□□□ -1.67
HDAC8-215ENST00000444609 Q5VV11 94 aa4.63□□□□□ -1.67
HDAC8-215ENST00000444609 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
HDAC8-215ENST00000444609 LST1O00453 97 aa4.62□□□□□ -1.67
HDAC8-215ENST00000444609 NPC2P61916 151 aa4.62□□□□□ -1.67
HDAC8-215ENST00000444609 SOSTDC1Q6X4U4 206 aa4.61□□□□□ -1.67
HDAC8-215ENST00000444609 MIR7-3HGQ8N6C7 128 aa4.61□□□□□ -1.67
HDAC8-215ENST00000444609 ZNF73O43830 326 aaPredicted RBP4.6□□□□□ -1.67
HDAC8-215ENST00000444609 TRACP01848 142 aa4.6□□□□□ -1.67
HDAC8-215ENST00000444609 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
HDAC8-215ENST00000444609 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
HDAC8-215ENST00000444609 TRAV23DV6A0A075B6W5 121 aa4.59□□□□□ -1.67
HDAC8-215ENST00000444609 NDUFV3P56181 108 aaKnown RBP4.59□□□□□ -1.67
HDAC8-215ENST00000444609 H0YGX0 51 aa4.58□□□□□ -1.68
HDAC8-215ENST00000444609 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
HDAC8-215ENST00000444609 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
HDAC8-215ENST00000444609 TEX49A0A1B0GTD5 131 aa4.57□□□□□ -1.68
HDAC8-215ENST00000444609 DEFB105AQ8NG35 78 aa4.57□□□□□ -1.68
HDAC8-215ENST00000444609 CLEC2BQ92478 149 aa4.57□□□□□ -1.68
HDAC8-215ENST00000444609 DHRS4-AS1Q9P1J3 65 aa4.57□□□□□ -1.68
HDAC8-215ENST00000444609 FAM240AA0A1B0GVK7 77 aa4.56□□□□□ -1.68
HDAC8-215ENST00000444609 NDUFC2O95298 119 aa4.56□□□□□ -1.68
HDAC8-215ENST00000444609 S100A7L2Q5SY68 101 aa4.56□□□□□ -1.68
HDAC8-215ENST00000444609 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
HDAC8-215ENST00000444609 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
HDAC8-215ENST00000444609 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
HDAC8-215ENST00000444609 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
HDAC8-215ENST00000444609 ACYP1P07311 99 aa4.54□□□□□ -1.68
HDAC8-215ENST00000444609 BAALC-AS2P0C853 105 aa4.53□□□□□ -1.68
HDAC8-215ENST00000444609 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
HDAC8-215ENST00000444609 SMIM11BQ8TCY0 68 aa4.53□□□□□ -1.68
HDAC8-215ENST00000444609 SNCGO76070 127 aa4.52□□□□□ -1.69
HDAC8-215ENST00000444609 DNAL4O96015 105 aa4.52□□□□□ -1.69
HDAC8-215ENST00000444609 UQCRQO14949 82 aa4.51□□□□□ -1.69
HDAC8-215ENST00000444609 MT-ATP8P03928 68 aa4.51□□□□□ -1.69
HDAC8-215ENST00000444609 FAM218AQ96MZ4 157 aa4.51□□□□□ -1.69
HDAC8-215ENST00000444609 TMEM258P61165 79 aa4.5□□□□□ -1.69
HDAC8-215ENST00000444609 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
HDAC8-215ENST00000444609 IMUPQ9GZP8 106 aa4.5□□□□□ -1.69
HDAC8-215ENST00000444609 H3BQ85 93 aa4.49□□□□□ -1.69
HDAC8-215ENST00000444609 TRBV7-7A0A0K0K1E9 115 aa4.48□□□□□ -1.69
HDAC8-215ENST00000444609 ORMDL1Q9P0S3 153 aa4.48□□□□□ -1.69
HDAC8-215ENST00000444609 TMEM256-PLSCR3K7ERE1 68 aa4.47□□□□□ -1.69
HDAC8-215ENST00000444609 SPRR2GQ9BYE4 73 aa4.47□□□□□ -1.69
HDAC8-215ENST00000444609 IGLV5-48A0A075B6I7 105 aa4.46□□□□□ -1.7
HDAC8-215ENST00000444609 A0A1W2PNM2 257 aa4.46□□□□□ -1.7
HDAC8-215ENST00000444609 JMJD7-PLA2G4BH0Y9G9 81 aa4.46□□□□□ -1.7
HDAC8-215ENST00000444609 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
HDAC8-215ENST00000444609 TRBV7-6A0A0J9YX20 115 aa4.45□□□□□ -1.7
HDAC8-215ENST00000444609 LINC00643Q86TS7 51 aa4.45□□□□□ -1.7
HDAC8-215ENST00000444609 DSCR10P59022 87 aa4.44□□□□□ -1.7
HDAC8-215ENST00000444609 LINC00575Q6W349 94 aa4.44□□□□□ -1.7
HDAC8-215ENST00000444609 hADV29S1A0JD25 119 aa4.43□□□□□ -1.7
HDAC8-215ENST00000444609 ELOF1P60002 83 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms