RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 NOTCH2NLQ7Z3S9 236 aa9.17□□□□□ -0.94
AP1S3-207ENST00000444408 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
AP1S3-207ENST00000444408 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
AP1S3-207ENST00000444408 GTF2H5Q6ZYL4 71 aa9.13□□□□□ -0.95
AP1S3-207ENST00000444408 A0A1B0GW54 56 aa9.12□□□□□ -0.95
AP1S3-207ENST00000444408 LINC00313P59037 77 aa9.11□□□□□ -0.95
AP1S3-207ENST00000444408 KRTAP16-1A8MUX0 517 aa9.1□□□□□ -0.95
AP1S3-207ENST00000444408 Q75L30 129 aa9.1□□□□□ -0.95
AP1S3-207ENST00000444408 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
AP1S3-207ENST00000444408 A8MUU9 505 aa9.08□□□□□ -0.96
AP1S3-207ENST00000444408 NREPQ16612 68 aa9.08□□□□□ -0.96
AP1S3-207ENST00000444408 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
AP1S3-207ENST00000444408 J3KT08 172 aa9.07□□□□□ -0.96
AP1S3-207ENST00000444408 F8W1H4 67 aa9.04□□□□□ -0.96
AP1S3-207ENST00000444408 IGKV3D-7A0A0C4DH55 119 aa9.03□□□□□ -0.96
AP1S3-207ENST00000444408 ETDBQ3ZM63 59 aa9.03□□□□□ -0.96
AP1S3-207ENST00000444408 A8MWP4 228 aa9.02□□□□□ -0.97
AP1S3-207ENST00000444408 ATP11AUNQ6ZP68 121 aa9.02□□□□□ -0.97
AP1S3-207ENST00000444408 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
AP1S3-207ENST00000444408 NDUFB1O75438 58 aa8.99□□□□□ -0.97
AP1S3-207ENST00000444408 Q6ZVQ6 151 aa8.99□□□□□ -0.97
AP1S3-207ENST00000444408 LCE2DQ5TA82 110 aaPredicted RBP8.98□□□□□ -0.97
AP1S3-207ENST00000444408 LINC00846Q9NV44 126 aa8.98□□□□□ -0.97
AP1S3-207ENST00000444408 A0A1B0GV90 55 aa8.97□□□□□ -0.97
AP1S3-207ENST00000444408 KRTAP19-2Q3LHN2 52 aa8.97□□□□□ -0.97
AP1S3-207ENST00000444408 C8orf17Q9NRJ1 99 aa8.97□□□□□ -0.97
AP1S3-207ENST00000444408 PRR15Q8IV56 129 aa8.96□□□□□ -0.98
AP1S3-207ENST00000444408 K7EQZ3 153 aa8.95□□□□□ -0.98
AP1S3-207ENST00000444408 BPY2O14599 106 aa8.94□□□□□ -0.98
AP1S3-207ENST00000444408 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
AP1S3-207ENST00000444408 FSIP2Q5CZC0 6907 aa8.93□□□□□ -0.98
AP1S3-207ENST00000444408 Q8N9L7 120 aa8.92□□□□□ -0.98
AP1S3-207ENST00000444408 MMP24-AS1A0A0U1RRL7 71 aa8.91□□□□□ -0.98
AP1S3-207ENST00000444408 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
AP1S3-207ENST00000444408 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
AP1S3-207ENST00000444408 Q8N9P0 234 aaPredicted RBP8.87□□□□□ -0.99
AP1S3-207ENST00000444408 ZCCHC13Q8WW36 166 aaKnown RBP8.83□□□□□ -1
AP1S3-207ENST00000444408 hDV103S1A0JD37 113 aa8.82□□□□□ -1
AP1S3-207ENST00000444408 TMEM254Q8TBM7 123 aa8.82□□□□□ -1
AP1S3-207ENST00000444408 MRPL34Q9BQ48 92 aaKnown RBP8.82□□□□□ -1
AP1S3-207ENST00000444408 WFDC13Q8IUB5 93 aa8.8□□□□□ -1
AP1S3-207ENST00000444408 MT1HP80294 61 aa8.78□□□□□ -1
AP1S3-207ENST00000444408 COX6B2Q6YFQ2 88 aa8.77□□□□□ -1.01
AP1S3-207ENST00000444408 NDUFS5O43920 106 aa8.75□□□□□ -1.01
AP1S3-207ENST00000444408 CASC2Q6XLA1 102 aa8.75□□□□□ -1.01
AP1S3-207ENST00000444408 HRES1P13985 223 aa8.73□□□□□ -1.01
AP1S3-207ENST00000444408 FAM240AA0A1B0GVK7 77 aa8.71□□□□□ -1.02
AP1S3-207ENST00000444408 ACYP1P07311 99 aa8.71□□□□□ -1.02
AP1S3-207ENST00000444408 SPINK7P58062 85 aa8.71□□□□□ -1.02
AP1S3-207ENST00000444408 CXCL6P80162 114 aa8.71□□□□□ -1.02
AP1S3-207ENST00000444408 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
AP1S3-207ENST00000444408 Q5W150 140 aa8.69□□□□□ -1.02
AP1S3-207ENST00000444408 MPLKIPQ8TAP9 179 aa8.68□□□□□ -1.02
AP1S3-207ENST00000444408 FLGP20930 4061 aaPredicted RBP8.65□□□□□ -1.02
AP1S3-207ENST00000444408 FAM236DA0A1B0GTK5 79 aa8.6□□□□□ -1.03
AP1S3-207ENST00000444408 M0R2T5 61 aa8.6□□□□□ -1.03
AP1S3-207ENST00000444408 FAM236CP0DP71 79 aa8.6□□□□□ -1.03
AP1S3-207ENST00000444408 RBM12B-AS1Q9P1G2 102 aa8.59□□□□□ -1.03
AP1S3-207ENST00000444408 IGKV2D-30A0A075B6S6 120 aa8.57□□□□□ -1.04
AP1S3-207ENST00000444408 IGKV2-30P06310 120 aa8.57□□□□□ -1.04
AP1S3-207ENST00000444408 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
AP1S3-207ENST00000444408 LINC00643Q86TS7 51 aa8.56□□□□□ -1.04
AP1S3-207ENST00000444408 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
AP1S3-207ENST00000444408 HIST1H4AP62805 103 aaKnown RBP8.55□□□□□ -1.04
AP1S3-207ENST00000444408 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
AP1S3-207ENST00000444408 A0A087WVE0 104 aa8.52□□□□□ -1.05
AP1S3-207ENST00000444408 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
AP1S3-207ENST00000444408 J3QR89 54 aa8.49□□□□□ -1.05
AP1S3-207ENST00000444408 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
AP1S3-207ENST00000444408 C4orf26Q17RF5 130 aa8.41□□□□□ -1.06
AP1S3-207ENST00000444408 KRTAP9-8Q9BYQ0 159 aa8.36□□□□□ -1.07
AP1S3-207ENST00000444408 TRAV22A0A0B4J277 110 aa8.35□□□□□ -1.07
AP1S3-207ENST00000444408 KRTAP9-7A8MTY7 169 aa8.34□□□□□ -1.07
AP1S3-207ENST00000444408 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
AP1S3-207ENST00000444408 K7ERU9 68 aa8.33□□□□□ -1.08
AP1S3-207ENST00000444408 UQCRQO14949 82 aa8.33□□□□□ -1.08
AP1S3-207ENST00000444408 KRTAP3-1Q9BYR8 98 aa8.32□□□□□ -1.08
AP1S3-207ENST00000444408 CYP4F30PQ9H0H9 118 aa8.32□□□□□ -1.08
AP1S3-207ENST00000444408 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.31□□□□□ -1.08
AP1S3-207ENST00000444408 H0Y9P7 68 aa8.3□□□□□ -1.08
AP1S3-207ENST00000444408 MT-ATP8P03928 68 aa8.3□□□□□ -1.08
AP1S3-207ENST00000444408 OCR1Q9BZK8 76 aa8.29□□□□□ -1.08
AP1S3-207ENST00000444408 MT2AP02795 61 aa8.28□□□□□ -1.08
AP1S3-207ENST00000444408 LOC101927531A0A1B0GV80 90 aa8.26□□□□□ -1.09
AP1S3-207ENST00000444408 C1orf64Q8NEQ6 169 aa8.25□□□□□ -1.09
AP1S3-207ENST00000444408 MT1FP04733 61 aa8.23□□□□□ -1.09
AP1S3-207ENST00000444408 SSPOA2VEC9 5147 aa8.21□□□□□ -1.09
AP1S3-207ENST00000444408 ATOX1O00244 68 aa8.21□□□□□ -1.1
AP1S3-207ENST00000444408 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
AP1S3-207ENST00000444408 USH2AO75445 5202 aa8.19□□□□□ -1.1
AP1S3-207ENST00000444408 IMUPQ9GZP8 106 aa8.19□□□□□ -1.1
AP1S3-207ENST00000444408 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
AP1S3-207ENST00000444408 KRTAP10-10P60014 251 aa8.15□□□□□ -1.1
AP1S3-207ENST00000444408 KLKP1Q107X0 134 aa8.15□□□□□ -1.1
AP1S3-207ENST00000444408 MP68P56378 58 aa8.14□□□□□ -1.11
AP1S3-207ENST00000444408 C5orf47Q569G3 176 aa8.13□□□□□ -1.11
AP1S3-207ENST00000444408 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
AP1S3-207ENST00000444408 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
AP1S3-207ENST00000444408 S4R3F8 94 aa8.12□□□□□ -1.11
AP1S3-207ENST00000444408 LCA10Q71F78 164 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms