RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 SPINK1P00995 79 aa4.17□□□□□ -1.74
R3HDM1-210ENST00000443537 Q5XG85 94 aa4.17□□□□□ -1.74
R3HDM1-210ENST00000443537 LIMD2Q9BT23 127 aa4.17□□□□□ -1.74
R3HDM1-210ENST00000443537 TRBV7-7A0A0K0K1E9 115 aa4.16□□□□□ -1.74
R3HDM1-210ENST00000443537 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
R3HDM1-210ENST00000443537 UBL5Q9BZL1 73 aa4.15□□□□□ -1.75
R3HDM1-210ENST00000443537 SRRM2Q9UQ35 2752 aaKnown RBP4.15□□□□□ -1.75
R3HDM1-210ENST00000443537 HSPG2P98160 4391 aa4.14□□□□□ -1.75
R3HDM1-210ENST00000443537 A0A1B0GV72 72 aa4.14□□□□□ -1.75
R3HDM1-210ENST00000443537 A0A1W2PNM2 257 aa4.14□□□□□ -1.75
R3HDM1-210ENST00000443537 ASB16-AS1Q495Z4 193 aa4.14□□□□□ -1.75
R3HDM1-210ENST00000443537 ATP5EP2Q5VTU8 51 aa4.14□□□□□ -1.75
R3HDM1-210ENST00000443537 LINC00304Q8N9R0 145 aa4.14□□□□□ -1.75
R3HDM1-210ENST00000443537 VPS25Q9BRG1 176 aa4.14□□□□□ -1.75
R3HDM1-210ENST00000443537 ANAPC11Q9NYG5 84 aa4.14□□□□□ -1.75
R3HDM1-210ENST00000443537 A0A087WSZ3 146 aa4.12□□□□□ -1.75
R3HDM1-210ENST00000443537 J3KT08 172 aa4.12□□□□□ -1.75
R3HDM1-210ENST00000443537 FLG2Q5D862 2391 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-210ENST00000443537 KRTAP10-8P60410 259 aa4.11□□□□□ -1.75
R3HDM1-210ENST00000443537 NREPQ16612 68 aa4.11□□□□□ -1.75
R3HDM1-210ENST00000443537 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
R3HDM1-210ENST00000443537 RYR1P21817 5038 aa4.1□□□□□ -1.75
R3HDM1-210ENST00000443537 EPPK1P58107 5090 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-210ENST00000443537 LINC00643Q86TS7 51 aa4.1□□□□□ -1.75
R3HDM1-210ENST00000443537 CXCL6P80162 114 aa4.09□□□□□ -1.75
R3HDM1-210ENST00000443537 LINC00846Q9NV44 126 aa4.09□□□□□ -1.75
R3HDM1-210ENST00000443537 FAT1Q14517 4588 aa4.07□□□□□ -1.76
R3HDM1-210ENST00000443537 BPY2O14599 106 aa4.07□□□□□ -1.76
R3HDM1-210ENST00000443537 HRCT1Q6UXD1 115 aa4.07□□□□□ -1.76
R3HDM1-210ENST00000443537 SIGMAR1Q99720 223 aa4.07□□□□□ -1.76
R3HDM1-210ENST00000443537 A0A0G2JQZ4 141 aa4.06□□□□□ -1.76
R3HDM1-210ENST00000443537 NDUFB1O75438 58 aa4.06□□□□□ -1.76
R3HDM1-210ENST00000443537 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
R3HDM1-210ENST00000443537 FP248Q71RG6 208 aaPredicted RBP4.06□□□□□ -1.76
R3HDM1-210ENST00000443537 IMUPQ9GZP8 106 aa4.06□□□□□ -1.76
R3HDM1-210ENST00000443537 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
R3HDM1-210ENST00000443537 DMBT1Q9UGM3 2413 aaPredicted RBP4.06□□□□□ -1.76
R3HDM1-210ENST00000443537 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
R3HDM1-210ENST00000443537 A8MWP4 228 aa4.04□□□□□ -1.76
R3HDM1-210ENST00000443537 DSCR10P59022 87 aa4.04□□□□□ -1.76
R3HDM1-210ENST00000443537 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-210ENST00000443537 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.76
R3HDM1-210ENST00000443537 IGKV4-1P06312 121 aa4.03□□□□□ -1.76
R3HDM1-210ENST00000443537 C1orf195Q5TG92 126 aa4.03□□□□□ -1.76
R3HDM1-210ENST00000443537 Q96NJ1 140 aa4.03□□□□□ -1.76
R3HDM1-210ENST00000443537 C8orf87E5RJ46 101 aa4.02□□□□□ -1.77
R3HDM1-210ENST00000443537 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
R3HDM1-210ENST00000443537 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
R3HDM1-210ENST00000443537 A0A1B0GVX0 72 aa4□□□□□ -1.77
R3HDM1-210ENST00000443537 HIST1H4AP62805 103 aaKnown RBP3.98□□□□□ -1.77
R3HDM1-210ENST00000443537 IGKV3D-7A0A0C4DH55 119 aa3.97□□□□□ -1.77
R3HDM1-210ENST00000443537 K7EQZ3 153 aa3.97□□□□□ -1.77
R3HDM1-210ENST00000443537 HCG22E2RYF7 251 aa3.96□□□□□ -1.78
R3HDM1-210ENST00000443537 LINC00313P59037 77 aa3.96□□□□□ -1.78
R3HDM1-210ENST00000443537 DEFB116Q30KQ4 102 aa3.96□□□□□ -1.78
R3HDM1-210ENST00000443537 HERC2O95714 4834 aa3.95□□□□□ -1.78
R3HDM1-210ENST00000443537 IGHV6-1A0A0B4J1U7 121 aa3.95□□□□□ -1.78
R3HDM1-210ENST00000443537 MT-ATP8P03928 68 aa3.95□□□□□ -1.78
R3HDM1-210ENST00000443537 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
R3HDM1-210ENST00000443537 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
R3HDM1-210ENST00000443537 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
R3HDM1-210ENST00000443537 SCGB1A1P11684 91 aa3.94□□□□□ -1.78
R3HDM1-210ENST00000443537 CASC2Q6XLA1 102 aa3.94□□□□□ -1.78
R3HDM1-210ENST00000443537 SMIM20Q8N5G0 67 aa3.94□□□□□ -1.78
R3HDM1-210ENST00000443537 TMEM254Q8TBM7 123 aa3.94□□□□□ -1.78
R3HDM1-210ENST00000443537 TNXBP22105 4242 aa3.94□□□□□ -1.78
R3HDM1-210ENST00000443537 MMP24-AS1A0A0U1RRL7 71 aa3.93□□□□□ -1.78
R3HDM1-210ENST00000443537 RETNLBQ9BQ08 111 aa3.93□□□□□ -1.78
R3HDM1-210ENST00000443537 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-210ENST00000443537 MYCBP2O75592 4640 aa3.92□□□□□ -1.78
R3HDM1-210ENST00000443537 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
R3HDM1-210ENST00000443537 PRR4Q16378 134 aa3.92□□□□□ -1.78
R3HDM1-210ENST00000443537 Q8N9L7 120 aa3.92□□□□□ -1.78
R3HDM1-210ENST00000443537 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
R3HDM1-210ENST00000443537 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
R3HDM1-210ENST00000443537 ATOX1O00244 68 aa3.91□□□□□ -1.78
R3HDM1-210ENST00000443537 SEC61GP60059 68 aa3.91□□□□□ -1.78
R3HDM1-210ENST00000443537 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
R3HDM1-210ENST00000443537 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
R3HDM1-210ENST00000443537 FAM236AA0A1B0GUQ0 79 aa3.9□□□□□ -1.79
R3HDM1-210ENST00000443537 FAM236BA0A1B0GV22 79 aa3.9□□□□□ -1.79
R3HDM1-210ENST00000443537 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
R3HDM1-210ENST00000443537 A0A087WVE0 104 aa3.89□□□□□ -1.79
R3HDM1-210ENST00000443537 WFDC13Q8IUB5 93 aa3.89□□□□□ -1.79
R3HDM1-210ENST00000443537 C20orf166-AS1Q96NR2 134 aa3.89□□□□□ -1.79
R3HDM1-210ENST00000443537 A8MUU9 505 aa3.87□□□□□ -1.79
R3HDM1-210ENST00000443537 UQCRQO14949 82 aa3.87□□□□□ -1.79
R3HDM1-210ENST00000443537 NDUFS5O43920 106 aa3.86□□□□□ -1.79
R3HDM1-210ENST00000443537 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
R3HDM1-210ENST00000443537 TRAV7A0A075B6U4 112 aa3.85□□□□□ -1.79
R3HDM1-210ENST00000443537 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
R3HDM1-210ENST00000443537 H3BPC8 53 aa3.85□□□□□ -1.79
R3HDM1-210ENST00000443537 C5orf47Q569G3 176 aa3.85□□□□□ -1.79
R3HDM1-210ENST00000443537 TRAV22A0A0B4J277 110 aa3.84□□□□□ -1.79
R3HDM1-210ENST00000443537 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.79
R3HDM1-210ENST00000443537 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.79
R3HDM1-210ENST00000443537 PCLOQ9Y6V0 5065 aa3.84□□□□□ -1.79
R3HDM1-210ENST00000443537 MP68P56378 58 aa3.83□□□□□ -1.8
R3HDM1-210ENST00000443537 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
R3HDM1-210ENST00000443537 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms