RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 K7EP34 96 aa6.69□□□□□ -1.34
USP1-203ENST00000442679 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
USP1-203ENST00000442679 SIGMAR1Q99720 223 aa6.69□□□□□ -1.34
USP1-203ENST00000442679 LINC00472Q9H8W2 130 aa6.69□□□□□ -1.34
USP1-203ENST00000442679 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
USP1-203ENST00000442679 A0A1B0GW54 56 aa6.67□□□□□ -1.34
USP1-203ENST00000442679 KRTAP4-12Q9BQ66 201 aa6.67□□□□□ -1.34
USP1-203ENST00000442679 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
USP1-203ENST00000442679 GTF2H5Q6ZYL4 71 aa6.65□□□□□ -1.34
USP1-203ENST00000442679 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
USP1-203ENST00000442679 PRO0461Q9UI25 63 aa6.64□□□□□ -1.35
USP1-203ENST00000442679 DSCR10P59022 87 aa6.63□□□□□ -1.35
USP1-203ENST00000442679 PCOTHQ58A44 107 aa6.63□□□□□ -1.35
USP1-203ENST00000442679 J3KT08 172 aa6.61□□□□□ -1.35
USP1-203ENST00000442679 LINC00313P59037 77 aa6.61□□□□□ -1.35
USP1-203ENST00000442679 IGHV6-1A0A0B4J1U7 121 aa6.6□□□□□ -1.35
USP1-203ENST00000442679 NREPQ16612 68 aa6.6□□□□□ -1.35
USP1-203ENST00000442679 KRTAP4-1Q9BYQ7 146 aa6.6□□□□□ -1.35
USP1-203ENST00000442679 Q75L30 129 aa6.59□□□□□ -1.35
USP1-203ENST00000442679 A0A0U1RQV1 116 aa6.58□□□□□ -1.36
USP1-203ENST00000442679 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
USP1-203ENST00000442679 F8W1H4 67 aa6.58□□□□□ -1.36
USP1-203ENST00000442679 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
USP1-203ENST00000442679 NDUFB1O75438 58 aa6.56□□□□□ -1.36
USP1-203ENST00000442679 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
USP1-203ENST00000442679 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
USP1-203ENST00000442679 A8MUU9 505 aa6.55□□□□□ -1.36
USP1-203ENST00000442679 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
USP1-203ENST00000442679 FAT4Q6V0I7 4981 aa6.55□□□□□ -1.36
USP1-203ENST00000442679 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
USP1-203ENST00000442679 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
USP1-203ENST00000442679 A8MWP4 228 aa6.53□□□□□ -1.36
USP1-203ENST00000442679 IGKV3D-7A0A0C4DH55 119 aa6.52□□□□□ -1.37
USP1-203ENST00000442679 ETDBQ3ZM63 59 aa6.52□□□□□ -1.37
USP1-203ENST00000442679 Q6ZVQ6 151 aa6.5□□□□□ -1.37
USP1-203ENST00000442679 BPY2O14599 106 aa6.49□□□□□ -1.37
USP1-203ENST00000442679 PRR15Q8IV56 129 aa6.49□□□□□ -1.37
USP1-203ENST00000442679 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
USP1-203ENST00000442679 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
USP1-203ENST00000442679 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
USP1-203ENST00000442679 LINC00846Q9NV44 126 aa6.48□□□□□ -1.37
USP1-203ENST00000442679 UBL5Q9BZL1 73 aa6.46□□□□□ -1.38
USP1-203ENST00000442679 A0A1B0GV90 55 aa6.45□□□□□ -1.38
USP1-203ENST00000442679 K7EQZ3 153 aa6.45□□□□□ -1.38
USP1-203ENST00000442679 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
USP1-203ENST00000442679 Q8N9P0 234 aaPredicted RBP6.42□□□□□ -1.38
USP1-203ENST00000442679 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
USP1-203ENST00000442679 Q8N9L7 120 aa6.41□□□□□ -1.38
USP1-203ENST00000442679 KRTAP19-2Q3LHN2 52 aa6.4□□□□□ -1.38
USP1-203ENST00000442679 TMEM254Q8TBM7 123 aa6.4□□□□□ -1.38
USP1-203ENST00000442679 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
USP1-203ENST00000442679 ZCCHC13Q8WW36 166 aaKnown RBP6.38□□□□□ -1.39
USP1-203ENST00000442679 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
USP1-203ENST00000442679 ACYP1P07311 99 aa6.37□□□□□ -1.39
USP1-203ENST00000442679 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
USP1-203ENST00000442679 WFDC13Q8IUB5 93 aa6.35□□□□□ -1.39
USP1-203ENST00000442679 NDUFS5O43920 106 aa6.34□□□□□ -1.39
USP1-203ENST00000442679 CXCL6P80162 114 aa6.34□□□□□ -1.39
USP1-203ENST00000442679 CASC2Q6XLA1 102 aa6.34□□□□□ -1.39
USP1-203ENST00000442679 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
USP1-203ENST00000442679 FLGP20930 4061 aaPredicted RBP6.31□□□□□ -1.4
USP1-203ENST00000442679 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
USP1-203ENST00000442679 SPINK7P58062 85 aa6.29□□□□□ -1.4
USP1-203ENST00000442679 MT1HP80294 61 aa6.29□□□□□ -1.4
USP1-203ENST00000442679 HRES1P13985 223 aa6.28□□□□□ -1.4
USP1-203ENST00000442679 Q5W150 140 aa6.25□□□□□ -1.41
USP1-203ENST00000442679 RBM12B-AS1Q9P1G2 102 aa6.25□□□□□ -1.41
USP1-203ENST00000442679 FAM236DA0A1B0GTK5 79 aa6.24□□□□□ -1.41
USP1-203ENST00000442679 FAM236CP0DP71 79 aa6.24□□□□□ -1.41
USP1-203ENST00000442679 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
USP1-203ENST00000442679 ATP5EP2Q5VTU8 51 aa6.24□□□□□ -1.41
USP1-203ENST00000442679 MPLKIPQ8TAP9 179 aa6.24□□□□□ -1.41
USP1-203ENST00000442679 J3QR89 54 aa6.22□□□□□ -1.41
USP1-203ENST00000442679 M0R2T5 61 aa6.22□□□□□ -1.41
USP1-203ENST00000442679 LINC00643Q86TS7 51 aa6.22□□□□□ -1.41
USP1-203ENST00000442679 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
USP1-203ENST00000442679 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
USP1-203ENST00000442679 IGKV2D-30A0A075B6S6 120 aa6.19□□□□□ -1.42
USP1-203ENST00000442679 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
USP1-203ENST00000442679 TP53AIP1Q9HCN2 124 aa6.18□□□□□ -1.42
USP1-203ENST00000442679 C7orf65Q6ZTY9 151 aa6.16□□□□□ -1.42
USP1-203ENST00000442679 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
USP1-203ENST00000442679 A0A087WVE0 104 aa6.13□□□□□ -1.43
USP1-203ENST00000442679 K7ERU9 68 aa6.08□□□□□ -1.44
USP1-203ENST00000442679 TRAV22A0A0B4J277 110 aa6.06□□□□□ -1.44
USP1-203ENST00000442679 UQCRQO14949 82 aa6.06□□□□□ -1.44
USP1-203ENST00000442679 C4orf26Q17RF5 130 aa6.06□□□□□ -1.44
USP1-203ENST00000442679 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
USP1-203ENST00000442679 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
USP1-203ENST00000442679 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
USP1-203ENST00000442679 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
USP1-203ENST00000442679 H0Y9P7 68 aa6.01□□□□□ -1.45
USP1-203ENST00000442679 PCP4P48539 62 aa6.01□□□□□ -1.45
USP1-203ENST00000442679 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
USP1-203ENST00000442679 ATOX1O00244 68 aa6□□□□□ -1.45
USP1-203ENST00000442679 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
USP1-203ENST00000442679 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
USP1-203ENST00000442679 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
USP1-203ENST00000442679 C1orf64Q8NEQ6 169 aa5.98□□□□□ -1.45
USP1-203ENST00000442679 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms