RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 ANAPC11Q9NYG5 84 aa3.56□□□□□ -1.84
HDAC9-215ENST00000441986 LINC00242Q5T6M2 205 aa3.55□□□□□ -1.84
HDAC9-215ENST00000441986 XAGE1AQ9HD64 81 aa3.55□□□□□ -1.84
HDAC9-215ENST00000441986 RPL37AP8A6NKH3 93 aa3.54□□□□□ -1.84
HDAC9-215ENST00000441986 UBE2AP49459 152 aa3.54□□□□□ -1.84
HDAC9-215ENST00000441986 KRTAP13-2Q52LG2 175 aa3.54□□□□□ -1.84
HDAC9-215ENST00000441986 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
HDAC9-215ENST00000441986 FAM218AQ96MZ4 157 aa3.54□□□□□ -1.84
HDAC9-215ENST00000441986 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
HDAC9-215ENST00000441986 TOMM7Q9P0U1 55 aa3.54□□□□□ -1.84
HDAC9-215ENST00000441986 NDUFA12Q9UI09 145 aa3.54□□□□□ -1.84
HDAC9-215ENST00000441986 IGLV4-3A0A075B6K6 122 aa3.53□□□□□ -1.84
HDAC9-215ENST00000441986 ERC2-IT1O76042 136 aa3.53□□□□□ -1.84
HDAC9-215ENST00000441986 Q8IZM0 81 aa3.53□□□□□ -1.84
HDAC9-215ENST00000441986 TRBV7-4A0A0J9YYF1 115 aa3.52□□□□□ -1.85
HDAC9-215ENST00000441986 F8WEM9 126 aa3.52□□□□□ -1.85
HDAC9-215ENST00000441986 RBM3P98179 157 aaKnown RBP3.52□□□□□ -1.85
HDAC9-215ENST00000441986 ASB16-AS1Q495Z4 193 aa3.52□□□□□ -1.85
HDAC9-215ENST00000441986 LINC00308Q8TCZ7 52 aa3.52□□□□□ -1.85
HDAC9-215ENST00000441986 TRAV23DV6A0A075B6W5 121 aa3.51□□□□□ -1.85
HDAC9-215ENST00000441986 Q1T7F1 81 aa3.51□□□□□ -1.85
HDAC9-215ENST00000441986 KRTAP13-1Q8IUC0 172 aa3.51□□□□□ -1.85
HDAC9-215ENST00000441986 C14orf132Q9NPU4 83 aa3.51□□□□□ -1.85
HDAC9-215ENST00000441986 FAM19A3Q7Z5A8 133 aa3.5□□□□□ -1.85
HDAC9-215ENST00000441986 NKAPP1Q8N9T2 125 aa3.5□□□□□ -1.85
HDAC9-215ENST00000441986 ZNF625Q96I27 306 aaPredicted RBP3.5□□□□□ -1.85
HDAC9-215ENST00000441986 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
HDAC9-215ENST00000441986 H0YGX0 51 aa3.49□□□□□ -1.85
HDAC9-215ENST00000441986 SOSTDC1Q6X4U4 206 aa3.49□□□□□ -1.85
HDAC9-215ENST00000441986 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
HDAC9-215ENST00000441986 IGKV2-28A0A075B6P5 120 aa3.48□□□□□ -1.85
HDAC9-215ENST00000441986 JMJD7-PLA2G4BH0Y9G9 81 aa3.48□□□□□ -1.85
HDAC9-215ENST00000441986 IGKV2D-28P01615 120 aa3.48□□□□□ -1.85
HDAC9-215ENST00000441986 KRTAP13-3Q3SY46 172 aa3.48□□□□□ -1.85
HDAC9-215ENST00000441986 CDKN2A-AS1Q9UH64 79 aa3.48□□□□□ -1.85
HDAC9-215ENST00000441986 SPINK1P00995 79 aa3.47□□□□□ -1.85
HDAC9-215ENST00000441986 CXCL6P80162 114 aa3.47□□□□□ -1.85
HDAC9-215ENST00000441986 PRLHP81277 87 aa3.47□□□□□ -1.85
HDAC9-215ENST00000441986 RBM12B-AS1Q9P1G2 102 aa3.47□□□□□ -1.85
HDAC9-215ENST00000441986 hDV103S1A0JD37 113 aa3.46□□□□□ -1.86
HDAC9-215ENST00000441986 NOTCH2NLQ7Z3S9 236 aa3.46□□□□□ -1.86
HDAC9-215ENST00000441986 MIR7-3HGQ8N6C7 128 aa3.46□□□□□ -1.86
HDAC9-215ENST00000441986 COX7B2Q8TF08 81 aa3.46□□□□□ -1.86
HDAC9-215ENST00000441986 KRTAP4-1Q9BYQ7 146 aa3.46□□□□□ -1.86
HDAC9-215ENST00000441986 UBL5Q9BZL1 73 aa3.46□□□□□ -1.86
HDAC9-215ENST00000441986 SNURFQ9Y675 71 aa3.46□□□□□ -1.86
HDAC9-215ENST00000441986 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
HDAC9-215ENST00000441986 NCR3O14931 201 aa3.45□□□□□ -1.86
HDAC9-215ENST00000441986 Q6ZVQ6 151 aa3.45□□□□□ -1.86
HDAC9-215ENST00000441986 TMEM254Q8TBM7 123 aa3.45□□□□□ -1.86
HDAC9-215ENST00000441986 ORMDL1Q9P0S3 153 aa3.45□□□□□ -1.86
HDAC9-215ENST00000441986 ZNF706Q9Y5V0 76 aaPredicted RBP3.45□□□□□ -1.86
HDAC9-215ENST00000441986 M0R378 163 aa3.44□□□□□ -1.86
HDAC9-215ENST00000441986 NDUFS5O43920 106 aa3.44□□□□□ -1.86
HDAC9-215ENST00000441986 NREPQ16612 68 aa3.44□□□□□ -1.86
HDAC9-215ENST00000441986 Q8NBF4 154 aa3.44□□□□□ -1.86
HDAC9-215ENST00000441986 SPRR4Q96PI1 79 aa3.44□□□□□ -1.86
HDAC9-215ENST00000441986 HIGD2AQ9BW72 106 aa3.44□□□□□ -1.86
HDAC9-215ENST00000441986 COX17Q14061 63 aa3.43□□□□□ -1.86
HDAC9-215ENST00000441986 SMIM11BQ8TCY0 68 aa3.43□□□□□ -1.86
HDAC9-215ENST00000441986 Q6ZQT0 140 aa3.42□□□□□ -1.86
HDAC9-215ENST00000441986 OCR1Q9BZK8 76 aa3.42□□□□□ -1.86
HDAC9-215ENST00000441986 A6NN06 94 aa3.41□□□□□ -1.86
HDAC9-215ENST00000441986 TMEM256-PLSCR3K7ERE1 68 aa3.41□□□□□ -1.86
HDAC9-215ENST00000441986 RPS29P62273 56 aaKnown RBP3.41□□□□□ -1.86
HDAC9-215ENST00000441986 MT1HP80294 61 aa3.41□□□□□ -1.86
HDAC9-215ENST00000441986 SSBP3-AS1Q7Z2R9 100 aa3.41□□□□□ -1.86
HDAC9-215ENST00000441986 CYP4F30PQ9H0H9 118 aa3.41□□□□□ -1.86
HDAC9-215ENST00000441986 SND1-IT1Q9HBX3 110 aa3.41□□□□□ -1.86
HDAC9-215ENST00000441986 TRAV22A0A0B4J277 110 aa3.4□□□□□ -1.87
HDAC9-215ENST00000441986 C8orf87E5RJ46 101 aa3.4□□□□□ -1.87
HDAC9-215ENST00000441986 PDE6GP18545 87 aa3.4□□□□□ -1.87
HDAC9-215ENST00000441986 Q8N377 158 aa3.4□□□□□ -1.87
HDAC9-215ENST00000441986 M0R2T5 61 aa3.39□□□□□ -1.87
HDAC9-215ENST00000441986 BPY2O14599 106 aa3.39□□□□□ -1.87
HDAC9-215ENST00000441986 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
HDAC9-215ENST00000441986 ZCCHC13Q8WW36 166 aaKnown RBP3.39□□□□□ -1.87
HDAC9-215ENST00000441986 IGLV8-61A0A075B6I0 122 aa3.38□□□□□ -1.87
HDAC9-215ENST00000441986 H3BQ85 93 aa3.38□□□□□ -1.87
HDAC9-215ENST00000441986 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
HDAC9-215ENST00000441986 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
HDAC9-215ENST00000441986 Q5VV11 94 aa3.38□□□□□ -1.87
HDAC9-215ENST00000441986 ATP11AUNQ6ZP68 121 aa3.38□□□□□ -1.87
HDAC9-215ENST00000441986 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
HDAC9-215ENST00000441986 ETDCA0A1B0GVM5 59 aa3.37□□□□□ -1.87
HDAC9-215ENST00000441986 LINC00158P58513 81 aa3.37□□□□□ -1.87
HDAC9-215ENST00000441986 KRTAP19-2Q3LHN2 52 aa3.37□□□□□ -1.87
HDAC9-215ENST00000441986 C1orf64Q8NEQ6 169 aa3.37□□□□□ -1.87
HDAC9-215ENST00000441986 MOBPQ13875 183 aa3.36□□□□□ -1.87
HDAC9-215ENST00000441986 PCOTHQ58A44 107 aa3.36□□□□□ -1.87
HDAC9-215ENST00000441986 LCA10Q71F78 164 aa3.36□□□□□ -1.87
HDAC9-215ENST00000441986 Q8NDZ9 215 aa3.36□□□□□ -1.87
HDAC9-215ENST00000441986 KCNQ1DNQ9H478 68 aa3.36□□□□□ -1.87
HDAC9-215ENST00000441986 IGKV4-1P06312 121 aa3.35□□□□□ -1.87
HDAC9-215ENST00000441986 MT3P25713 68 aa3.35□□□□□ -1.87
HDAC9-215ENST00000441986 SPRR1AP35321 89 aa3.35□□□□□ -1.87
HDAC9-215ENST00000441986 A8MUN3 132 aa3.34□□□□□ -1.87
HDAC9-215ENST00000441986 KRTAP4-16G5E9R7 235 aaPredicted RBP3.34□□□□□ -1.87
HDAC9-215ENST00000441986 PSPHP1O15172 72 aa3.34□□□□□ -1.87
HDAC9-215ENST00000441986 LIMD2Q9BT23 127 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms