RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 RHPN1-AS1Q9BWJ2 59 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 LINC00472Q9H8W2 130 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 GIG44P09565 113 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P9-201ENST00000441799 Q8N377 158 aa2.82□□□□□ -1.96
HMGB3P9-201ENST00000441799 CCL19Q99731 98 aa2.82□□□□□ -1.96
HMGB3P9-201ENST00000441799 RYR2Q92736 4967 aa2.81□□□□□ -1.96
HMGB3P9-201ENST00000441799 H3BUX3 64 aa2.81□□□□□ -1.96
HMGB3P9-201ENST00000441799 COX7BP24311 80 aa2.81□□□□□ -1.96
HMGB3P9-201ENST00000441799 PRR9Q5T870 116 aa2.81□□□□□ -1.96
HMGB3P9-201ENST00000441799 CMYA5Q8N3K9 4069 aa2.81□□□□□ -1.96
HMGB3P9-201ENST00000441799 MGAM2Q2M2H8 2515 aa2.8□□□□□ -1.96
HMGB3P9-201ENST00000441799 WNK2Q9Y3S1 2297 aa2.8□□□□□ -1.96
HMGB3P9-201ENST00000441799 COX17Q14061 63 aa2.8□□□□□ -1.96
HMGB3P9-201ENST00000441799 BRD3OSQ6XYD6 125 aa2.8□□□□□ -1.96
HMGB3P9-201ENST00000441799 ST20-AS1Q8NBB2 130 aa2.8□□□□□ -1.96
HMGB3P9-201ENST00000441799 ABCA4P78363 2273 aa2.79□□□□□ -1.96
HMGB3P9-201ENST00000441799 IGKV2-28A0A075B6P5 120 aa2.79□□□□□ -1.96
HMGB3P9-201ENST00000441799 IGKV2D-28P01615 120 aa2.79□□□□□ -1.96
HMGB3P9-201ENST00000441799 HTN1P15515 57 aa2.79□□□□□ -1.96
HMGB3P9-201ENST00000441799 LINC00158P58513 81 aa2.79□□□□□ -1.96
HMGB3P9-201ENST00000441799 RPL39P62891 51 aaKnown RBP2.79□□□□□ -1.96
HMGB3P9-201ENST00000441799 C4orf3Q8WVX3 66 aa2.79□□□□□ -1.96
HMGB3P9-201ENST00000441799 TENM1Q9UKZ4 2725 aa2.78□□□□□ -1.96
HMGB3P9-201ENST00000441799 DEFB131BA0A096LNP1 70 aa2.78□□□□□ -1.96
HMGB3P9-201ENST00000441799 TRGV1A0A0A0MS02 117 aa2.78□□□□□ -1.96
HMGB3P9-201ENST00000441799 A0A1W2PPR1 153 aa2.78□□□□□ -1.96
HMGB3P9-201ENST00000441799 M0R2N4 97 aa2.78□□□□□ -1.96
HMGB3P9-201ENST00000441799 SPINK13Q1W4C9 94 aa2.78□□□□□ -1.96
HMGB3P9-201ENST00000441799 SPINT4Q6UDR6 99 aa2.78□□□□□ -1.96
HMGB3P9-201ENST00000441799 HERC2O95714 4834 aa2.78□□□□□ -1.96
HMGB3P9-201ENST00000441799 HRNRQ86YZ3 2850 aaPredicted RBP2.78□□□□□ -1.97
HMGB3P9-201ENST00000441799 M0QY20 66 aa2.77□□□□□ -1.97
HMGB3P9-201ENST00000441799 DEFB1P60022 68 aa2.77□□□□□ -1.97
HMGB3P9-201ENST00000441799 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
HMGB3P9-201ENST00000441799 DEFB104AQ8WTQ1 72 aa2.77□□□□□ -1.97
HMGB3P9-201ENST00000441799 HIVEP2P31629 2446 aa2.77□□□□□ -1.97
HMGB3P9-201ENST00000441799 A0A0J9YWU9 116 aa2.76□□□□□ -1.97
HMGB3P9-201ENST00000441799 NBDYA0A0U1RRE5 68 aa2.76□□□□□ -1.97
HMGB3P9-201ENST00000441799 A0A1B0GU69 56 aa2.76□□□□□ -1.97
HMGB3P9-201ENST00000441799 Q6ZQY7 126 aa2.76□□□□□ -1.97
HMGB3P9-201ENST00000441799 SACSQ9NZJ4 4579 aa2.76□□□□□ -1.97
HMGB3P9-201ENST00000441799 PRB2P02812 416 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P9-201ENST00000441799 LINC00315P59091 139 aa2.75□□□□□ -1.97
HMGB3P9-201ENST00000441799 DEFB131AP59861 70 aa2.75□□□□□ -1.97
HMGB3P9-201ENST00000441799 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
HMGB3P9-201ENST00000441799 Q8N9L7 120 aa2.75□□□□□ -1.97
HMGB3P9-201ENST00000441799 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
HMGB3P9-201ENST00000441799 SONP18583 2426 aaKnown RBP2.75□□□□□ -1.97
HMGB3P9-201ENST00000441799 DYNC2H1Q8NCM8 4307 aaKnown RBP2.74□□□□□ -1.97
HMGB3P9-201ENST00000441799 DEFB116Q30KQ4 102 aa2.74□□□□□ -1.97
HMGB3P9-201ENST00000441799 LINC00575Q6W349 94 aa2.74□□□□□ -1.97
HMGB3P9-201ENST00000441799 Q96NJ1 140 aa2.74□□□□□ -1.97
HMGB3P9-201ENST00000441799 VWFP04275 2813 aa2.74□□□□□ -1.97
HMGB3P9-201ENST00000441799 DNAH1Q9P2D7 4330 aa2.73□□□□□ -1.97
HMGB3P9-201ENST00000441799 IGKV2D-24A0A075B6R9 120 aa2.73□□□□□ -1.97
HMGB3P9-201ENST00000441799 A0A096LNT2 108 aa2.73□□□□□ -1.97
HMGB3P9-201ENST00000441799 Q8IZM0 81 aa2.73□□□□□ -1.97
HMGB3P9-201ENST00000441799 MAPK1IP1LQ8NDC0 245 aa2.73□□□□□ -1.97
HMGB3P9-201ENST00000441799 PSORS1C2Q9UIG4 136 aa2.73□□□□□ -1.97
HMGB3P9-201ENST00000441799 A0A1W2PNN7 141 aa2.72□□□□□ -1.97
HMGB3P9-201ENST00000441799 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.98
HMGB3P9-201ENST00000441799 FAM168BA1KXE4 195 aa2.71□□□□□ -1.98
HMGB3P9-201ENST00000441799 HRES1P13985 223 aa2.71□□□□□ -1.98
HMGB3P9-201ENST00000441799 CDKN2A-AS1Q9UH64 79 aa2.71□□□□□ -1.98
HMGB3P9-201ENST00000441799 AKAP6Q13023 2319 aa2.71□□□□□ -1.98
HMGB3P9-201ENST00000441799 TENM3Q9P273 2699 aa2.71□□□□□ -1.98
HMGB3P9-201ENST00000441799 WNK1Q9H4A3 2382 aa2.71□□□□□ -1.98
HMGB3P9-201ENST00000441799 DEFB136Q30KP8 78 aa2.7□□□□□ -1.98
HMGB3P9-201ENST00000441799 C10orf99Q6UWK7 81 aa2.7□□□□□ -1.98
HMGB3P9-201ENST00000441799 TOMM7Q9P0U1 55 aa2.7□□□□□ -1.98
HMGB3P9-201ENST00000441799 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.69□□□□□ -1.98
HMGB3P9-201ENST00000441799 A0A0G2JQZ4 141 aa2.69□□□□□ -1.98
HMGB3P9-201ENST00000441799 A8MTW9 85 aa2.69□□□□□ -1.98
HMGB3P9-201ENST00000441799 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
HMGB3P9-201ENST00000441799 RPL37AP61513 92 aaKnown RBP2.69□□□□□ -1.98
HMGB3P9-201ENST00000441799 LINC00304Q8N9R0 145 aa2.69□□□□□ -1.98
HMGB3P9-201ENST00000441799 ANAPC11Q9NYG5 84 aa2.69□□□□□ -1.98
HMGB3P9-201ENST00000441799 KRTAP11-1Q8IUC1 163 aa2.68□□□□□ -1.98
HMGB3P9-201ENST00000441799 NOP10Q9NPE3 64 aaKnown RBP2.68□□□□□ -1.98
HMGB3P9-201ENST00000441799 DSCR10P59022 87 aa2.67□□□□□ -1.98
HMGB3P9-201ENST00000441799 COX6A2Q02221 97 aa2.67□□□□□ -1.98
HMGB3P9-201ENST00000441799 ABCA13Q86UQ4 5058 aa2.67□□□□□ -1.98
HMGB3P9-201ENST00000441799 LY6G6CO95867 125 aa2.66□□□□□ -1.98
HMGB3P9-201ENST00000441799 ANGP03950 147 aaKnown RBP2.66□□□□□ -1.98
HMGB3P9-201ENST00000441799 KRTAP13-3Q3SY46 172 aa2.66□□□□□ -1.98
HMGB3P9-201ENST00000441799 DNAH9Q9NYC9 4486 aa2.66□□□□□ -1.98
HMGB3P9-201ENST00000441799 IGLV6-57P01721 117 aa2.65□□□□□ -1.99
HMGB3P9-201ENST00000441799 R4GN34 69 aa2.65□□□□□ -1.99
HMGB3P9-201ENST00000441799 HERC1Q15751 4861 aa2.64□□□□□ -1.99
HMGB3P9-201ENST00000441799 DEFB130BP0DP73 79 aa2.64□□□□□ -1.99
HMGB3P9-201ENST00000441799 DEFB130AP0DP74 79 aa2.64□□□□□ -1.99
HMGB3P9-201ENST00000441799 ACYP2P14621 99 aa2.64□□□□□ -1.99
HMGB3P9-201ENST00000441799 TYMSOSQ8TAI1 123 aa2.64□□□□□ -1.99
HMGB3P9-201ENST00000441799 DNAH3Q8TD57 4116 aa2.64□□□□□ -1.99
HMGB3P9-201ENST00000441799 SORL1Q92673 2214 aa2.64□□□□□ -1.99
HMGB3P9-201ENST00000441799 IGLV5-48A0A075B6I7 105 aa2.63□□□□□ -1.99
HMGB3P9-201ENST00000441799 K7EQZ3 153 aa2.63□□□□□ -1.99
HMGB3P9-201ENST00000441799 LYSTQ99698 3801 aa2.63□□□□□ -1.99
HMGB3P9-201ENST00000441799 TP53AIP1Q9HCN2 124 aa2.63□□□□□ -1.99
HMGB3P9-201ENST00000441799 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms