RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 C14orf132Q9NPU4 83 aa4.36□□□□□ -1.71
EPHA4-208ENST00000441679 FAM240AA0A1B0GVK7 77 aa4.35□□□□□ -1.71
EPHA4-208ENST00000441679 K7ERU9 68 aa4.35□□□□□ -1.71
EPHA4-208ENST00000441679 NREPQ16612 68 aa4.35□□□□□ -1.71
EPHA4-208ENST00000441679 UBL5Q9BZL1 73 aa4.35□□□□□ -1.71
EPHA4-208ENST00000441679 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
EPHA4-208ENST00000441679 TRBV7-7A0A0K0K1E9 115 aa4.34□□□□□ -1.71
EPHA4-208ENST00000441679 J3KT08 172 aa4.34□□□□□ -1.71
EPHA4-208ENST00000441679 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
EPHA4-208ENST00000441679 KRTAP13-2Q52LG2 175 aa4.34□□□□□ -1.71
EPHA4-208ENST00000441679 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
EPHA4-208ENST00000441679 A0A1W2PNM2 257 aa4.31□□□□□ -1.72
EPHA4-208ENST00000441679 NDUFB1O75438 58 aa4.31□□□□□ -1.72
EPHA4-208ENST00000441679 HRCT1Q6UXD1 115 aa4.31□□□□□ -1.72
EPHA4-208ENST00000441679 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
EPHA4-208ENST00000441679 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
EPHA4-208ENST00000441679 A0A087WSZ3 146 aa4.3□□□□□ -1.72
EPHA4-208ENST00000441679 A0A1B0GV72 72 aa4.3□□□□□ -1.72
EPHA4-208ENST00000441679 SEC61GP60059 68 aa4.3□□□□□ -1.72
EPHA4-208ENST00000441679 FP248Q71RG6 208 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-208ENST00000441679 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
EPHA4-208ENST00000441679 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
EPHA4-208ENST00000441679 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
EPHA4-208ENST00000441679 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
EPHA4-208ENST00000441679 DYNC1H1Q14204 4646 aaKnown RBP4.27□□□□□ -1.73
EPHA4-208ENST00000441679 BPY2O14599 106 aa4.27□□□□□ -1.73
EPHA4-208ENST00000441679 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
EPHA4-208ENST00000441679 LINC00643Q86TS7 51 aa4.26□□□□□ -1.73
EPHA4-208ENST00000441679 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
EPHA4-208ENST00000441679 IGKV4-1P06312 121 aa4.24□□□□□ -1.73
EPHA4-208ENST00000441679 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
EPHA4-208ENST00000441679 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
EPHA4-208ENST00000441679 LINC00472Q9H8W2 130 aa4.24□□□□□ -1.73
EPHA4-208ENST00000441679 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
EPHA4-208ENST00000441679 APOBP04114 4563 aaKnown RBP4.23□□□□□ -1.73
EPHA4-208ENST00000441679 A0A0G2JQZ4 141 aa4.23□□□□□ -1.73
EPHA4-208ENST00000441679 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
EPHA4-208ENST00000441679 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
EPHA4-208ENST00000441679 A8MWP4 228 aa4.22□□□□□ -1.73
EPHA4-208ENST00000441679 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
EPHA4-208ENST00000441679 EPPK1P58107 5090 aaKnown RBP4.22□□□□□ -1.73
EPHA4-208ENST00000441679 IMUPQ9GZP8 106 aa4.21□□□□□ -1.74
EPHA4-208ENST00000441679 HSPG2P98160 4391 aa4.2□□□□□ -1.74
EPHA4-208ENST00000441679 KIAA1109Q2LD37 5005 aa4.2□□□□□ -1.74
EPHA4-208ENST00000441679 LINC00313P59037 77 aa4.2□□□□□ -1.74
EPHA4-208ENST00000441679 PRR15Q8IV56 129 aa4.19□□□□□ -1.74
EPHA4-208ENST00000441679 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
EPHA4-208ENST00000441679 RYR1P21817 5038 aa4.18□□□□□ -1.74
EPHA4-208ENST00000441679 HIST1H4AP62805 103 aaKnown RBP4.17□□□□□ -1.74
EPHA4-208ENST00000441679 Q96NJ1 140 aa4.17□□□□□ -1.74
EPHA4-208ENST00000441679 FAT1Q14517 4588 aa4.16□□□□□ -1.74
EPHA4-208ENST00000441679 IGHV6-1A0A0B4J1U7 121 aa4.16□□□□□ -1.74
EPHA4-208ENST00000441679 TPRXLQ17RH7 258 aa4.16□□□□□ -1.74
EPHA4-208ENST00000441679 DEFB116Q30KQ4 102 aa4.16□□□□□ -1.74
EPHA4-208ENST00000441679 FLG2Q5D862 2391 aaPredicted RBP4.15□□□□□ -1.75
EPHA4-208ENST00000441679 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
EPHA4-208ENST00000441679 DMBT1Q9UGM3 2413 aaPredicted RBP4.14□□□□□ -1.75
EPHA4-208ENST00000441679 IGKV3D-7A0A0C4DH55 119 aa4.14□□□□□ -1.75
EPHA4-208ENST00000441679 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
EPHA4-208ENST00000441679 TP53AIP1Q9HCN2 124 aa4.14□□□□□ -1.75
EPHA4-208ENST00000441679 HCG22E2RYF7 251 aa4.13□□□□□ -1.75
EPHA4-208ENST00000441679 SCGB1A1P11684 91 aa4.13□□□□□ -1.75
EPHA4-208ENST00000441679 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
EPHA4-208ENST00000441679 CASC2Q6XLA1 102 aa4.13□□□□□ -1.75
EPHA4-208ENST00000441679 SMIM20Q8N5G0 67 aa4.13□□□□□ -1.75
EPHA4-208ENST00000441679 RETNLBQ9BQ08 111 aa4.13□□□□□ -1.75
EPHA4-208ENST00000441679 C8orf17Q9NRJ1 99 aa4.13□□□□□ -1.75
EPHA4-208ENST00000441679 K7EQZ3 153 aa4.12□□□□□ -1.75
EPHA4-208ENST00000441679 TMEM254Q8TBM7 123 aa4.12□□□□□ -1.75
EPHA4-208ENST00000441679 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
EPHA4-208ENST00000441679 MRPL34Q9BQ48 92 aaKnown RBP4.11□□□□□ -1.75
EPHA4-208ENST00000441679 KRTAP13-3Q3SY46 172 aa4.1□□□□□ -1.75
EPHA4-208ENST00000441679 A8MU10 97 aa4.09□□□□□ -1.75
EPHA4-208ENST00000441679 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
EPHA4-208ENST00000441679 NDUFS5O43920 106 aa4.08□□□□□ -1.76
EPHA4-208ENST00000441679 MMP24-AS1A0A0U1RRL7 71 aa4.07□□□□□ -1.76
EPHA4-208ENST00000441679 C9orf92A6NGG3 77 aa4.07□□□□□ -1.76
EPHA4-208ENST00000441679 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
EPHA4-208ENST00000441679 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
EPHA4-208ENST00000441679 HERC2O95714 4834 aa4.06□□□□□ -1.76
EPHA4-208ENST00000441679 UQCRQO14949 82 aa4.06□□□□□ -1.76
EPHA4-208ENST00000441679 MT-ATP8P03928 68 aa4.06□□□□□ -1.76
EPHA4-208ENST00000441679 WFDC13Q8IUB5 93 aa4.06□□□□□ -1.76
EPHA4-208ENST00000441679 Q8N9L7 120 aa4.06□□□□□ -1.76
EPHA4-208ENST00000441679 A8MUU9 505 aa4.05□□□□□ -1.76
EPHA4-208ENST00000441679 ATOX1O00244 68 aa4.05□□□□□ -1.76
EPHA4-208ENST00000441679 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
EPHA4-208ENST00000441679 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
EPHA4-208ENST00000441679 H3BPC8 53 aa4.03□□□□□ -1.76
EPHA4-208ENST00000441679 MP68P56378 58 aa4.03□□□□□ -1.76
EPHA4-208ENST00000441679 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
EPHA4-208ENST00000441679 RPL37P61927 97 aaKnown RBP4.03□□□□□ -1.76
EPHA4-208ENST00000441679 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
EPHA4-208ENST00000441679 CAMK2N1Q7Z7J9 78 aa4.02□□□□□ -1.77
EPHA4-208ENST00000441679 LRP1Q07954 4544 aaKnown RBP4.01□□□□□ -1.77
EPHA4-208ENST00000441679 ZCCHC13Q8WW36 166 aaKnown RBP4.01□□□□□ -1.77
EPHA4-208ENST00000441679 TRAV7A0A075B6U4 112 aa4□□□□□ -1.77
EPHA4-208ENST00000441679 A0A087WVE0 104 aa4□□□□□ -1.77
EPHA4-208ENST00000441679 FAM236AA0A1B0GUQ0 79 aa4□□□□□ -1.77
EPHA4-208ENST00000441679 FAM236BA0A1B0GV22 79 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms