RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 OBSCN-AS1Q96MR7 158 aa2.77□□□□□ -1.97
PTPN4-206ENST00000441089 A0A087X002 238 aa2.76□□□□□ -1.97
PTPN4-206ENST00000441089 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
PTPN4-206ENST00000441089 A0A1B0GV72 72 aa2.76□□□□□ -1.97
PTPN4-206ENST00000441089 TMEM256-PLSCR3K7ERE1 68 aa2.76□□□□□ -1.97
PTPN4-206ENST00000441089 NDUFV3P56181 108 aaKnown RBP2.76□□□□□ -1.97
PTPN4-206ENST00000441089 ETDBQ3ZM63 59 aa2.76□□□□□ -1.97
PTPN4-206ENST00000441089 OCIAD2Q56VL3 154 aa2.76□□□□□ -1.97
PTPN4-206ENST00000441089 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
PTPN4-206ENST00000441089 SNCGO76070 127 aa2.75□□□□□ -1.97
PTPN4-206ENST00000441089 TPRXLQ17RH7 258 aa2.75□□□□□ -1.97
PTPN4-206ENST00000441089 KRTAP13-2Q52LG2 175 aa2.75□□□□□ -1.97
PTPN4-206ENST00000441089 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
PTPN4-206ENST00000441089 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
PTPN4-206ENST00000441089 IGLV8-61A0A075B6I0 122 aa2.74□□□□□ -1.97
PTPN4-206ENST00000441089 H3BQ85 93 aa2.74□□□□□ -1.97
PTPN4-206ENST00000441089 TEN1Q86WV5 123 aa2.74□□□□□ -1.97
PTPN4-206ENST00000441089 C14orf132Q9NPU4 83 aa2.74□□□□□ -1.97
PTPN4-206ENST00000441089 LAMTOR3Q9UHA4 124 aa2.74□□□□□ -1.97
PTPN4-206ENST00000441089 IGLV9-49A0A0B4J1Y8 123 aa2.73□□□□□ -1.97
PTPN4-206ENST00000441089 TRBV7-4A0A0J9YYF1 115 aa2.73□□□□□ -1.97
PTPN4-206ENST00000441089 MOBPQ13875 183 aa2.73□□□□□ -1.97
PTPN4-206ENST00000441089 FAM229BQ4G0N7 80 aa2.73□□□□□ -1.97
PTPN4-206ENST00000441089 IGFL1Q6UW32 110 aa2.73□□□□□ -1.97
PTPN4-206ENST00000441089 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
PTPN4-206ENST00000441089 LOC110117498A0A087WWA1 95 aa2.72□□□□□ -1.97
PTPN4-206ENST00000441089 A0A1W2PNM2 257 aa2.72□□□□□ -1.97
PTPN4-206ENST00000441089 JMJD7-PLA2G4BH0Y9G9 81 aa2.72□□□□□ -1.97
PTPN4-206ENST00000441089 RBM3P98179 157 aaKnown RBP2.72□□□□□ -1.97
PTPN4-206ENST00000441089 Q6ZQT0 140 aa2.72□□□□□ -1.97
PTPN4-206ENST00000441089 Q8NBF4 154 aa2.72□□□□□ -1.97
PTPN4-206ENST00000441089 F8WEM9 126 aa2.71□□□□□ -1.98
PTPN4-206ENST00000441089 C9orf153Q5TBE3 101 aa2.71□□□□□ -1.98
PTPN4-206ENST00000441089 CCKP06307 115 aa2.7□□□□□ -1.98
PTPN4-206ENST00000441089 SSBP3-AS1Q7Z2R9 100 aa2.7□□□□□ -1.98
PTPN4-206ENST00000441089 DSCR8Q96T75 97 aa2.7□□□□□ -1.98
PTPN4-206ENST00000441089 USH2AO75445 5202 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
PTPN4-206ENST00000441089 IGLV7-46A0A075B6I9 117 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 SEC61BP60468 96 aaKnown RBP2.69□□□□□ -1.98
PTPN4-206ENST00000441089 MT1HP80294 61 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 ASB16-AS1Q495Z4 193 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 Q6JHZ5 121 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 Q6Q795 121 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 HRCT1Q6UXD1 115 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 TYMSOSQ8TAI1 123 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 VPS25Q9BRG1 176 aa2.69□□□□□ -1.98
PTPN4-206ENST00000441089 TRBV7-7A0A0K0K1E9 115 aa2.68□□□□□ -1.98
PTPN4-206ENST00000441089 PDE6GP18545 87 aa2.68□□□□□ -1.98
PTPN4-206ENST00000441089 LINC00846Q9NV44 126 aa2.68□□□□□ -1.98
PTPN4-206ENST00000441089 A0A087WSZ3 146 aa2.67□□□□□ -1.98
PTPN4-206ENST00000441089 FAM240AA0A1B0GVK7 77 aa2.66□□□□□ -1.98
PTPN4-206ENST00000441089 M0R2T5 61 aa2.66□□□□□ -1.98
PTPN4-206ENST00000441089 CD164Q04900 197 aa2.66□□□□□ -1.98
PTPN4-206ENST00000441089 LINC00304Q8N9R0 145 aa2.66□□□□□ -1.98
PTPN4-206ENST00000441089 RETNLBQ9BQ08 111 aa2.66□□□□□ -1.98
PTPN4-206ENST00000441089 Q6ZVQ6 151 aa2.65□□□□□ -1.99
PTPN4-206ENST00000441089 Q96NJ1 140 aa2.65□□□□□ -1.99
PTPN4-206ENST00000441089 KRTAP4-1Q9BYQ7 146 aa2.65□□□□□ -1.99
PTPN4-206ENST00000441089 J3QR89 54 aa2.64□□□□□ -1.99
PTPN4-206ENST00000441089 K7ERU9 68 aa2.64□□□□□ -1.99
PTPN4-206ENST00000441089 SPINK1P00995 79 aa2.64□□□□□ -1.99
PTPN4-206ENST00000441089 ACYP1P07311 99 aa2.64□□□□□ -1.99
PTPN4-206ENST00000441089 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
PTPN4-206ENST00000441089 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
PTPN4-206ENST00000441089 Q5XG85 94 aa2.64□□□□□ -1.99
PTPN4-206ENST00000441089 LINC00472Q9H8W2 130 aa2.64□□□□□ -1.99
PTPN4-206ENST00000441089 A0A1B0GW54 56 aa2.63□□□□□ -1.99
PTPN4-206ENST00000441089 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
PTPN4-206ENST00000441089 DEFB116Q30KQ4 102 aa2.63□□□□□ -1.99
PTPN4-206ENST00000441089 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
PTPN4-206ENST00000441089 SPAG11AQ6PDA7 123 aa2.63□□□□□ -1.99
PTPN4-206ENST00000441089 NEBP20929 6669 aa2.62□□□□□ -1.99
PTPN4-206ENST00000441089 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
PTPN4-206ENST00000441089 NREPQ16612 68 aa2.62□□□□□ -1.99
PTPN4-206ENST00000441089 KRTAP19-2Q3LHN2 52 aa2.62□□□□□ -1.99
PTPN4-206ENST00000441089 C1orf195Q5TG92 126 aa2.62□□□□□ -1.99
PTPN4-206ENST00000441089 UBL5Q9BZL1 73 aa2.62□□□□□ -1.99
PTPN4-206ENST00000441089 IGKV3D-7A0A0C4DH55 119 aa2.61□□□□□ -1.99
PTPN4-206ENST00000441089 MT-ATP8P03928 68 aa2.61□□□□□ -1.99
PTPN4-206ENST00000441089 DSCR10P59022 87 aa2.61□□□□□ -1.99
PTPN4-206ENST00000441089 LIMD2Q9BT23 127 aa2.61□□□□□ -1.99
PTPN4-206ENST00000441089 SS18L2Q9UHA2 77 aa2.61□□□□□ -1.99
PTPN4-206ENST00000441089 BPY2O14599 106 aa2.6□□□□□ -1.99
PTPN4-206ENST00000441089 IGKV4-1P06312 121 aa2.6□□□□□ -1.99
PTPN4-206ENST00000441089 FP248Q71RG6 208 aaPredicted RBP2.6□□□□□ -1.99
PTPN4-206ENST00000441089 LINC00643Q86TS7 51 aa2.6□□□□□ -1.99
PTPN4-206ENST00000441089 Q8N9L7 120 aa2.6□□□□□ -1.99
PTPN4-206ENST00000441089 SIGMAR1Q99720 223 aa2.6□□□□□ -1.99
PTPN4-206ENST00000441089 K7EQZ3 153 aa2.59□□□□□ -1.99
PTPN4-206ENST00000441089 KRTAP13-3Q3SY46 172 aa2.59□□□□□ -1.99
PTPN4-206ENST00000441089 NOTCH2NLQ7Z3S9 236 aa2.59□□□□□ -1.99
PTPN4-206ENST00000441089 A8MWP4 228 aa2.58□□□□□ -2
PTPN4-206ENST00000441089 CXCL6P80162 114 aa2.58□□□□□ -2
PTPN4-206ENST00000441089 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
PTPN4-206ENST00000441089 ATP5EP2Q5VTU8 51 aa2.58□□□□□ -2
PTPN4-206ENST00000441089 A0A087WVE0 104 aa2.57□□□□□ -2
PTPN4-206ENST00000441089 MMP24-AS1A0A0U1RRL7 71 aa2.57□□□□□ -2
PTPN4-206ENST00000441089 A0A1B0GVX0 72 aa2.57□□□□□ -2
PTPN4-206ENST00000441089 J3KT08 172 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms