RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NBDYA0A0U1RRE5 68 aa7.23□□□□□ -1.25
LTBR-203ENST00000441074 HRES1P13985 223 aa7.23□□□□□ -1.25
LTBR-203ENST00000441074 DNAH2Q9P225 4427 aa7.23□□□□□ -1.25
LTBR-203ENST00000441074 VPS13DQ5THJ4 4388 aa7.23□□□□□ -1.25
LTBR-203ENST00000441074 KRTAP11-1Q8IUC1 163 aa7.23□□□□□ -1.25
LTBR-203ENST00000441074 LY6G6CO95867 125 aa7.22□□□□□ -1.25
LTBR-203ENST00000441074 Q96NJ1 140 aa7.22□□□□□ -1.25
LTBR-203ENST00000441074 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
LTBR-203ENST00000441074 KMT2CQ8NEZ4 4911 aaKnown RBP7.21□□□□□ -1.26
LTBR-203ENST00000441074 SRRM2Q9UQ35 2752 aaKnown RBP7.19□□□□□ -1.26
LTBR-203ENST00000441074 SACSQ9NZJ4 4579 aa7.19□□□□□ -1.26
LTBR-203ENST00000441074 HYDINQ4G0P3 5121 aa7.19□□□□□ -1.26
LTBR-203ENST00000441074 CHTF8P0CG12 524 aa7.18□□□□□ -1.26
LTBR-203ENST00000441074 Q6ZRN7 208 aaPredicted RBP7.18□□□□□ -1.26
LTBR-203ENST00000441074 ALMS1Q8TCU4 4167 aa7.18□□□□□ -1.26
LTBR-203ENST00000441074 A0A1B0GVX0 72 aa7.15□□□□□ -1.26
LTBR-203ENST00000441074 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
LTBR-203ENST00000441074 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
LTBR-203ENST00000441074 HECTD4Q9Y4D8 3996 aa7.14□□□□□ -1.27
LTBR-203ENST00000441074 IGHV6-1A0A0B4J1U7 121 aa7.13□□□□□ -1.27
LTBR-203ENST00000441074 PANO1I0J062 215 aa7.13□□□□□ -1.27
LTBR-203ENST00000441074 CDK2AP2O75956 126 aa7.11□□□□□ -1.27
LTBR-203ENST00000441074 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
LTBR-203ENST00000441074 IGLV9-49A0A0B4J1Y8 123 aa7.1□□□□□ -1.27
LTBR-203ENST00000441074 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
LTBR-203ENST00000441074 LINC00313P59037 77 aa7.1□□□□□ -1.27
LTBR-203ENST00000441074 A0A087WTM6 91 aa7.09□□□□□ -1.28
LTBR-203ENST00000441074 FRAS1Q86XX4 4008 aa7.08□□□□□ -1.28
LTBR-203ENST00000441074 C8orf87E5RJ46 101 aa7.08□□□□□ -1.28
LTBR-203ENST00000441074 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
LTBR-203ENST00000441074 ZNF706Q9Y5V0 76 aaPredicted RBP7.07□□□□□ -1.28
LTBR-203ENST00000441074 RYR3Q15413 4870 aa7.07□□□□□ -1.28
LTBR-203ENST00000441074 ACYP2P14621 99 aa7.07□□□□□ -1.28
LTBR-203ENST00000441074 RYR2Q92736 4967 aa7.07□□□□□ -1.28
LTBR-203ENST00000441074 A0A087X002 238 aa7.06□□□□□ -1.28
LTBR-203ENST00000441074 NOTCH2NLQ7Z3S9 236 aa7.06□□□□□ -1.28
LTBR-203ENST00000441074 SPACA4Q8TDM5 124 aa7.06□□□□□ -1.28
LTBR-203ENST00000441074 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.06□□□□□ -1.28
LTBR-203ENST00000441074 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
LTBR-203ENST00000441074 C1orf134Q5TEV5 83 aa7.05□□□□□ -1.28
LTBR-203ENST00000441074 KRTAP13-3Q3SY46 172 aa7.05□□□□□ -1.28
LTBR-203ENST00000441074 PRAC1Q96KF2 57 aa7.04□□□□□ -1.28
LTBR-203ENST00000441074 Q5W150 140 aa7.04□□□□□ -1.28
LTBR-203ENST00000441074 FAM229AH3BQW9 127 aa7.02□□□□□ -1.28
LTBR-203ENST00000441074 RTL8CO15255 209 aa7.01□□□□□ -1.29
LTBR-203ENST00000441074 H3BS24 57 aa7□□□□□ -1.29
LTBR-203ENST00000441074 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
LTBR-203ENST00000441074 KRTAP10-2P60368 255 aa7□□□□□ -1.29
LTBR-203ENST00000441074 DMAC1Q96GE9 116 aa7□□□□□ -1.29
LTBR-203ENST00000441074 DNAH17Q9UFH2 4485 aa7□□□□□ -1.29
LTBR-203ENST00000441074 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
LTBR-203ENST00000441074 FAT2Q9NYQ8 4349 aa6.98□□□□□ -1.29
LTBR-203ENST00000441074 IGLV5-52A0A0A0MRZ9 124 aa6.98□□□□□ -1.29
LTBR-203ENST00000441074 A0A1B0GU69 56 aa6.98□□□□□ -1.29
LTBR-203ENST00000441074 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
LTBR-203ENST00000441074 LINC01554Q52M75 96 aa6.97□□□□□ -1.29
LTBR-203ENST00000441074 DNAH5Q8TE73 4624 aa6.96□□□□□ -1.29
LTBR-203ENST00000441074 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
LTBR-203ENST00000441074 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
LTBR-203ENST00000441074 DNAH8Q96JB1 4490 aa6.95□□□□□ -1.3
LTBR-203ENST00000441074 PKD1P98161 4303 aa6.95□□□□□ -1.3
LTBR-203ENST00000441074 ZNF861PO60384 105 aa6.94□□□□□ -1.3
LTBR-203ENST00000441074 SPINK6Q6UWN8 80 aa6.93□□□□□ -1.3
LTBR-203ENST00000441074 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
LTBR-203ENST00000441074 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
LTBR-203ENST00000441074 UQCR11O14957 56 aa6.91□□□□□ -1.3
LTBR-203ENST00000441074 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
LTBR-203ENST00000441074 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
LTBR-203ENST00000441074 IGKV2-30P06310 120 aa6.87□□□□□ -1.31
LTBR-203ENST00000441074 CIRBP-AS1Q8TBR5 109 aa6.86□□□□□ -1.31
LTBR-203ENST00000441074 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
LTBR-203ENST00000441074 IGLV7-43P04211 117 aa6.84□□□□□ -1.31
LTBR-203ENST00000441074 SSBP3-AS1Q7Z2R9 100 aa6.83□□□□□ -1.32
LTBR-203ENST00000441074 RETNLBQ9BQ08 111 aa6.83□□□□□ -1.32
LTBR-203ENST00000441074 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
LTBR-203ENST00000441074 CSAG1Q6PB30 78 aa6.81□□□□□ -1.32
LTBR-203ENST00000441074 VPS13BQ7Z7G8 4022 aa6.78□□□□□ -1.32
LTBR-203ENST00000441074 DYNC1H1Q14204 4646 aaKnown RBP6.77□□□□□ -1.33
LTBR-203ENST00000441074 Q6ZSA8 131 aa6.75□□□□□ -1.33
LTBR-203ENST00000441074 KRTAP16-1A8MUX0 517 aa6.73□□□□□ -1.33
LTBR-203ENST00000441074 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
LTBR-203ENST00000441074 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
LTBR-203ENST00000441074 FAT1Q14517 4588 aa6.7□□□□□ -1.34
LTBR-203ENST00000441074 APOBP04114 4563 aaKnown RBP6.68□□□□□ -1.34
LTBR-203ENST00000441074 KRTAP13-2Q52LG2 175 aa6.65□□□□□ -1.35
LTBR-203ENST00000441074 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
LTBR-203ENST00000441074 HSPG2P98160 4391 aa6.63□□□□□ -1.35
LTBR-203ENST00000441074 BIRC6Q9NR09 4857 aa6.62□□□□□ -1.35
LTBR-203ENST00000441074 A8MUU9 505 aa6.62□□□□□ -1.35
LTBR-203ENST00000441074 SPINK1P00995 79 aa6.62□□□□□ -1.35
LTBR-203ENST00000441074 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
LTBR-203ENST00000441074 H0YAA0 97 aa6.59□□□□□ -1.36
LTBR-203ENST00000441074 LCE2BO14633 110 aa6.59□□□□□ -1.36
LTBR-203ENST00000441074 RYR1P21817 5038 aa6.59□□□□□ -1.36
LTBR-203ENST00000441074 Q8N1X5 172 aa6.57□□□□□ -1.36
LTBR-203ENST00000441074 LINC00304Q8N9R0 145 aa6.57□□□□□ -1.36
LTBR-203ENST00000441074 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
LTBR-203ENST00000441074 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
LTBR-203ENST00000441074 ROMO1P60602 79 aa6.53□□□□□ -1.36
LTBR-203ENST00000441074 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms