RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 ETDBQ3ZM63 59 aa5.87□□□□□ -1.47
UBE2D4-204ENST00000440899 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
UBE2D4-204ENST00000440899 IGKV4-1P06312 121 aa5.86□□□□□ -1.47
UBE2D4-204ENST00000440899 FXYD2P54710 66 aa5.86□□□□□ -1.47
UBE2D4-204ENST00000440899 PRO0461Q9UI25 63 aa5.86□□□□□ -1.47
UBE2D4-204ENST00000440899 SSPOA2VEC9 5147 aa5.85□□□□□ -1.47
UBE2D4-204ENST00000440899 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
UBE2D4-204ENST00000440899 FAM236DA0A1B0GTK5 79 aa5.85□□□□□ -1.47
UBE2D4-204ENST00000440899 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
UBE2D4-204ENST00000440899 FAM236CP0DP71 79 aa5.85□□□□□ -1.47
UBE2D4-204ENST00000440899 ANKRD29Q8N6D5 301 aa5.85□□□□□ -1.47
UBE2D4-204ENST00000440899 H3BQ85 93 aa5.84□□□□□ -1.47
UBE2D4-204ENST00000440899 TRIAP1O43715 76 aa5.84□□□□□ -1.47
UBE2D4-204ENST00000440899 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
UBE2D4-204ENST00000440899 DNAL4O96015 105 aa5.83□□□□□ -1.48
UBE2D4-204ENST00000440899 RBM12B-AS1Q9P1G2 102 aa5.83□□□□□ -1.48
UBE2D4-204ENST00000440899 MPLKIPQ8TAP9 179 aa5.82□□□□□ -1.48
UBE2D4-204ENST00000440899 ORMDL1Q9P0S3 153 aa5.82□□□□□ -1.48
UBE2D4-204ENST00000440899 K7ERJ3 54 aa5.81□□□□□ -1.48
UBE2D4-204ENST00000440899 MT2AP02795 61 aa5.81□□□□□ -1.48
UBE2D4-204ENST00000440899 MT-ATP8P03928 68 aa5.81□□□□□ -1.48
UBE2D4-204ENST00000440899 NOTCH2NLQ7Z3S9 236 aa5.81□□□□□ -1.48
UBE2D4-204ENST00000440899 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
UBE2D4-204ENST00000440899 TMEM256-PLSCR3K7ERE1 68 aa5.8□□□□□ -1.48
UBE2D4-204ENST00000440899 SCGB1C2P0DMR2 95 aa5.8□□□□□ -1.48
UBE2D4-204ENST00000440899 HRES1P13985 223 aa5.8□□□□□ -1.48
UBE2D4-204ENST00000440899 DEFB116Q30KQ4 102 aa5.8□□□□□ -1.48
UBE2D4-204ENST00000440899 IGHV6-1A0A0B4J1U7 121 aa5.79□□□□□ -1.48
UBE2D4-204ENST00000440899 TRACP01848 142 aa5.79□□□□□ -1.48
UBE2D4-204ENST00000440899 CCKP06307 115 aa5.79□□□□□ -1.48
UBE2D4-204ENST00000440899 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
UBE2D4-204ENST00000440899 COX6CP09669 75 aa5.78□□□□□ -1.48
UBE2D4-204ENST00000440899 PSMB2P49721 201 aa5.78□□□□□ -1.48
UBE2D4-204ENST00000440899 MT1FP04733 61 aa5.76□□□□□ -1.49
UBE2D4-204ENST00000440899 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
UBE2D4-204ENST00000440899 SMIM20Q8N5G0 67 aa5.75□□□□□ -1.49
UBE2D4-204ENST00000440899 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
UBE2D4-204ENST00000440899 LCE2BO14633 110 aa5.74□□□□□ -1.49
UBE2D4-204ENST00000440899 SMCPP49901 116 aaPredicted RBP5.74□□□□□ -1.49
UBE2D4-204ENST00000440899 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
UBE2D4-204ENST00000440899 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
UBE2D4-204ENST00000440899 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
UBE2D4-204ENST00000440899 ATXN8Q156A1 80 aa5.72□□□□□ -1.49
UBE2D4-204ENST00000440899 C5orf47Q569G3 176 aa5.72□□□□□ -1.49
UBE2D4-204ENST00000440899 IMUPQ9GZP8 106 aa5.72□□□□□ -1.49
UBE2D4-204ENST00000440899 ACYP1P07311 99 aa5.71□□□□□ -1.5
UBE2D4-204ENST00000440899 RBM3P98179 157 aaKnown RBP5.71□□□□□ -1.5
UBE2D4-204ENST00000440899 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
UBE2D4-204ENST00000440899 J3KT08 172 aa5.7□□□□□ -1.5
UBE2D4-204ENST00000440899 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
UBE2D4-204ENST00000440899 DSCR8Q96T75 97 aa5.7□□□□□ -1.5
UBE2D4-204ENST00000440899 H3BT86 120 aa5.68□□□□□ -1.5
UBE2D4-204ENST00000440899 CCDC179H3BU77 68 aa5.68□□□□□ -1.5
UBE2D4-204ENST00000440899 SPINK7P58062 85 aa5.68□□□□□ -1.5
UBE2D4-204ENST00000440899 C9JAW5 83 aa5.67□□□□□ -1.5
UBE2D4-204ENST00000440899 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
UBE2D4-204ENST00000440899 NDUFB1O75438 58 aa5.66□□□□□ -1.5
UBE2D4-204ENST00000440899 Q6ZQT0 140 aa5.66□□□□□ -1.5
UBE2D4-204ENST00000440899 UQCRQO14949 82 aa5.65□□□□□ -1.5
UBE2D4-204ENST00000440899 BAALC-AS2P0C853 105 aa5.65□□□□□ -1.5
UBE2D4-204ENST00000440899 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.5
UBE2D4-204ENST00000440899 LINC00846Q9NV44 126 aa5.63□□□□□ -1.51
UBE2D4-204ENST00000440899 A8MWP4 228 aa5.61□□□□□ -1.51
UBE2D4-204ENST00000440899 LINC00643Q86TS7 51 aa5.61□□□□□ -1.51
UBE2D4-204ENST00000440899 C8orf17Q9NRJ1 99 aa5.61□□□□□ -1.51
UBE2D4-204ENST00000440899 A0A1B0GW54 56 aa5.6□□□□□ -1.51
UBE2D4-204ENST00000440899 WFDC13Q8IUB5 93 aa5.6□□□□□ -1.51
UBE2D4-204ENST00000440899 IGKV3D-7A0A0C4DH55 119 aa5.58□□□□□ -1.52
UBE2D4-204ENST00000440899 JMJD7-PLA2G4BH0Y9G9 81 aa5.58□□□□□ -1.52
UBE2D4-204ENST00000440899 ATOX1O00244 68 aa5.58□□□□□ -1.52
UBE2D4-204ENST00000440899 KRTAP19-6Q3LI70 58 aa5.58□□□□□ -1.52
UBE2D4-204ENST00000440899 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
UBE2D4-204ENST00000440899 COX7CP15954 63 aa5.57□□□□□ -1.52
UBE2D4-204ENST00000440899 PDE6GP18545 87 aa5.57□□□□□ -1.52
UBE2D4-204ENST00000440899 TMEM258P61165 79 aa5.57□□□□□ -1.52
UBE2D4-204ENST00000440899 Q6ZVQ6 151 aa5.57□□□□□ -1.52
UBE2D4-204ENST00000440899 FAM236AA0A1B0GUQ0 79 aa5.56□□□□□ -1.52
UBE2D4-204ENST00000440899 FAM236BA0A1B0GV22 79 aa5.56□□□□□ -1.52
UBE2D4-204ENST00000440899 PRR15Q8IV56 129 aa5.54□□□□□ -1.52
UBE2D4-204ENST00000440899 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
UBE2D4-204ENST00000440899 NREPQ16612 68 aa5.52□□□□□ -1.53
UBE2D4-204ENST00000440899 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
UBE2D4-204ENST00000440899 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
UBE2D4-204ENST00000440899 C14orf132Q9NPU4 83 aa5.51□□□□□ -1.53
UBE2D4-204ENST00000440899 MRPL34Q9BQ48 92 aaKnown RBP5.5□□□□□ -1.53
UBE2D4-204ENST00000440899 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
UBE2D4-204ENST00000440899 HIST1H4AP62805 103 aaKnown RBP5.49□□□□□ -1.53
UBE2D4-204ENST00000440899 SERP2Q8N6R1 65 aa5.49□□□□□ -1.53
UBE2D4-204ENST00000440899 hDV103S1A0JD37 113 aa5.47□□□□□ -1.53
UBE2D4-204ENST00000440899 NDUFS5O43920 106 aa5.46□□□□□ -1.54
UBE2D4-204ENST00000440899 ATP5EP2Q5VTU8 51 aa5.46□□□□□ -1.54
UBE2D4-204ENST00000440899 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
UBE2D4-204ENST00000440899 K7EQZ3 153 aa5.44□□□□□ -1.54
UBE2D4-204ENST00000440899 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
UBE2D4-204ENST00000440899 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
UBE2D4-204ENST00000440899 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
UBE2D4-204ENST00000440899 C7orf65Q6ZTY9 151 aa5.42□□□□□ -1.54
UBE2D4-204ENST00000440899 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
UBE2D4-204ENST00000440899 Q5W150 140 aa5.4□□□□□ -1.54
UBE2D4-204ENST00000440899 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms