RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 Q8NDZ9 215 aa3.75□□□□□ -1.81
PTPRR-204ENST00000440835 C1orf64Q8NEQ6 169 aa3.75□□□□□ -1.81
PTPRR-204ENST00000440835 TNXBP22105 4242 aa3.74□□□□□ -1.81
PTPRR-204ENST00000440835 HIGD2BQ4VC39 106 aa3.74□□□□□ -1.81
PTPRR-204ENST00000440835 UNQ6190/PRO20217Q6UXQ8 127 aa3.74□□□□□ -1.81
PTPRR-204ENST00000440835 IGKV4-1P06312 121 aa3.73□□□□□ -1.81
PTPRR-204ENST00000440835 C6orf48Q9UBA6 75 aa3.72□□□□□ -1.81
PTPRR-204ENST00000440835 CHTF8P0CG12 524 aa3.71□□□□□ -1.81
PTPRR-204ENST00000440835 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.71□□□□□ -1.81
PTPRR-204ENST00000440835 Q6ZQY7 126 aa3.71□□□□□ -1.81
PTPRR-204ENST00000440835 PSORS1C2Q9UIG4 136 aa3.71□□□□□ -1.81
PTPRR-204ENST00000440835 C10orf25Q5T742 122 aa3.71□□□□□ -1.82
PTPRR-204ENST00000440835 A0A096LNI7 61 aa3.71□□□□□ -1.82
PTPRR-204ENST00000440835 C9orf116Q5BN46 136 aaPredicted RBP3.71□□□□□ -1.82
PTPRR-204ENST00000440835 TLX1NBP0CAT3 122 aa3.7□□□□□ -1.82
PTPRR-204ENST00000440835 PDE6GP18545 87 aa3.7□□□□□ -1.82
PTPRR-204ENST00000440835 Q5VV11 94 aa3.7□□□□□ -1.82
PTPRR-204ENST00000440835 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
PTPRR-204ENST00000440835 LIMD2Q9BT23 127 aa3.69□□□□□ -1.82
PTPRR-204ENST00000440835 IGLV1-50A0A075B6I6 118 aa3.69□□□□□ -1.82
PTPRR-204ENST00000440835 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
PTPRR-204ENST00000440835 HCG22E2RYF7 251 aa3.69□□□□□ -1.82
PTPRR-204ENST00000440835 PRR4Q16378 134 aa3.69□□□□□ -1.82
PTPRR-204ENST00000440835 SPTSSBQ8NFR3 76 aa3.68□□□□□ -1.82
PTPRR-204ENST00000440835 ZCCHC13Q8WW36 166 aaKnown RBP3.68□□□□□ -1.82
PTPRR-204ENST00000440835 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
PTPRR-204ENST00000440835 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
PTPRR-204ENST00000440835 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
PTPRR-204ENST00000440835 XAGE1AQ9HD64 81 aa3.67□□□□□ -1.82
PTPRR-204ENST00000440835 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
PTPRR-204ENST00000440835 H3BQ85 93 aa3.66□□□□□ -1.82
PTPRR-204ENST00000440835 COX7BP24311 80 aa3.66□□□□□ -1.82
PTPRR-204ENST00000440835 IGLV6-57P01721 117 aa3.66□□□□□ -1.82
PTPRR-204ENST00000440835 IGLV5-37A0A075B6J1 123 aa3.65□□□□□ -1.82
PTPRR-204ENST00000440835 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.82
PTPRR-204ENST00000440835 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.83
PTPRR-204ENST00000440835 IGLV7-43P04211 117 aa3.65□□□□□ -1.83
PTPRR-204ENST00000440835 ST20-AS1Q8NBB2 130 aa3.64□□□□□ -1.83
PTPRR-204ENST00000440835 A0A1W2PNN7 141 aa3.63□□□□□ -1.83
PTPRR-204ENST00000440835 C1orf137Q5JT78 98 aa3.63□□□□□ -1.83
PTPRR-204ENST00000440835 Q8N9P0 234 aaPredicted RBP3.63□□□□□ -1.83
PTPRR-204ENST00000440835 CASC2Q6XLA1 102 aa3.62□□□□□ -1.83
PTPRR-204ENST00000440835 PRR15LQ9BU68 103 aa3.62□□□□□ -1.83
PTPRR-204ENST00000440835 KCNQ1DNQ9H478 68 aa3.62□□□□□ -1.83
PTPRR-204ENST00000440835 ETDCA0A1B0GVM5 59 aa3.61□□□□□ -1.83
PTPRR-204ENST00000440835 KRTAP16-1A8MUX0 517 aa3.61□□□□□ -1.83
PTPRR-204ENST00000440835 ELOF1P60002 83 aaKnown RBP3.61□□□□□ -1.83
PTPRR-204ENST00000440835 LRP2P98164 4655 aa3.6□□□□□ -1.83
PTPRR-204ENST00000440835 RNF213Q63HN8 5207 aa3.6□□□□□ -1.83
PTPRR-204ENST00000440835 DHRS4-AS1Q9P1J3 65 aa3.6□□□□□ -1.83
PTPRR-204ENST00000440835 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
PTPRR-204ENST00000440835 LOC101927531A0A1B0GV80 90 aa3.59□□□□□ -1.83
PTPRR-204ENST00000440835 A6NED7 52 aa3.59□□□□□ -1.84
PTPRR-204ENST00000440835 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.84
PTPRR-204ENST00000440835 DSCR10P59022 87 aa3.59□□□□□ -1.84
PTPRR-204ENST00000440835 MOBPQ13875 183 aa3.59□□□□□ -1.84
PTPRR-204ENST00000440835 K7EQZ3 153 aa3.58□□□□□ -1.84
PTPRR-204ENST00000440835 FAM168BA1KXE4 195 aa3.58□□□□□ -1.84
PTPRR-204ENST00000440835 ZNF861PO60384 105 aa3.58□□□□□ -1.84
PTPRR-204ENST00000440835 A0A1W2PNM2 257 aa3.57□□□□□ -1.84
PTPRR-204ENST00000440835 RPL37AP8A6NKH3 93 aa3.57□□□□□ -1.84
PTPRR-204ENST00000440835 LINC00208Q96KT6 92 aa3.57□□□□□ -1.84
PTPRR-204ENST00000440835 SPRR1AP35321 89 aa3.57□□□□□ -1.84
PTPRR-204ENST00000440835 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
PTPRR-204ENST00000440835 Q6ZRX8 168 aa3.57□□□□□ -1.84
PTPRR-204ENST00000440835 NDUFB1O75438 58 aa3.56□□□□□ -1.84
PTPRR-204ENST00000440835 Q8N377 158 aa3.56□□□□□ -1.84
PTPRR-204ENST00000440835 DEFB105AQ8NG35 78 aa3.56□□□□□ -1.84
PTPRR-204ENST00000440835 Q9BRP9 147 aa3.56□□□□□ -1.84
PTPRR-204ENST00000440835 IGLV5-48A0A075B6I7 105 aa3.55□□□□□ -1.84
PTPRR-204ENST00000440835 ROMO1P60602 79 aa3.55□□□□□ -1.84
PTPRR-204ENST00000440835 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
PTPRR-204ENST00000440835 KRTAP7-1Q8IUC3 87 aa3.54□□□□□ -1.84
PTPRR-204ENST00000440835 SPANXA2-OT1Q8N9U9 137 aa3.54□□□□□ -1.84
PTPRR-204ENST00000440835 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
PTPRR-204ENST00000440835 KRTAP11-1Q8IUC1 163 aa3.53□□□□□ -1.84
PTPRR-204ENST00000440835 SPINK7P58062 85 aa3.52□□□□□ -1.85
PTPRR-204ENST00000440835 TPRXLQ17RH7 258 aa3.52□□□□□ -1.85
PTPRR-204ENST00000440835 COA5Q86WW8 74 aa3.52□□□□□ -1.85
PTPRR-204ENST00000440835 WFDC13Q8IUB5 93 aa3.52□□□□□ -1.85
PTPRR-204ENST00000440835 TYMSOSQ8TAI1 123 aa3.52□□□□□ -1.85
PTPRR-204ENST00000440835 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
PTPRR-204ENST00000440835 Q8NBF4 154 aa3.52□□□□□ -1.85
PTPRR-204ENST00000440835 SPAG11AQ6PDA7 123 aa3.51□□□□□ -1.85
PTPRR-204ENST00000440835 SPRR4Q96PI1 79 aa3.51□□□□□ -1.85
PTPRR-204ENST00000440835 K7ERS5 55 aa3.51□□□□□ -1.85
PTPRR-204ENST00000440835 A0A0G2JQZ4 141 aa3.5□□□□□ -1.85
PTPRR-204ENST00000440835 H0Y9P7 68 aa3.5□□□□□ -1.85
PTPRR-204ENST00000440835 KRTAP13-1Q8IUC0 172 aa3.5□□□□□ -1.85
PTPRR-204ENST00000440835 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
PTPRR-204ENST00000440835 PRLHP81277 87 aa3.5□□□□□ -1.85
PTPRR-204ENST00000440835 LINC00304Q8N9R0 145 aa3.49□□□□□ -1.85
PTPRR-204ENST00000440835 LINC01558Q9Y6Z2 57 aa3.49□□□□□ -1.85
PTPRR-204ENST00000440835 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
PTPRR-204ENST00000440835 C8orf17Q9NRJ1 99 aa3.48□□□□□ -1.85
PTPRR-204ENST00000440835 LPAP08519 4548 aa3.47□□□□□ -1.85
PTPRR-204ENST00000440835 SPRR1BP22528 89 aa3.47□□□□□ -1.85
PTPRR-204ENST00000440835 IGLV7-46A0A075B6I9 117 aa3.47□□□□□ -1.85
PTPRR-204ENST00000440835 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
PTPRR-204ENST00000440835 H3BPC8 53 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms