RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 KRTAP26-1Q6PEX3 210 aa2.87□□□□□ -1.95
SCN3A-204ENST00000440431 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
SCN3A-204ENST00000440431 C8orf17Q9NRJ1 99 aa2.87□□□□□ -1.95
SCN3A-204ENST00000440431 C7orf65Q6ZTY9 151 aa2.87□□□□□ -1.95
SCN3A-204ENST00000440431 A6NED7 52 aa2.87□□□□□ -1.95
SCN3A-204ENST00000440431 STAB2Q8WWQ8 2551 aa2.86□□□□□ -1.95
SCN3A-204ENST00000440431 RETNLBQ9BQ08 111 aa2.86□□□□□ -1.95
SCN3A-204ENST00000440431 ALMS1Q8TCU4 4167 aa2.86□□□□□ -1.95
SCN3A-204ENST00000440431 H7BZZ5 65 aa2.86□□□□□ -1.95
SCN3A-204ENST00000440431 RBM12B-AS1Q9P1G2 102 aa2.86□□□□□ -1.95
SCN3A-204ENST00000440431 COX6B2Q6YFQ2 88 aa2.86□□□□□ -1.95
SCN3A-204ENST00000440431 SPRR1BP22528 89 aa2.85□□□□□ -1.95
SCN3A-204ENST00000440431 SPRR1AP35321 89 aa2.85□□□□□ -1.95
SCN3A-204ENST00000440431 MPLKIPQ8TAP9 179 aa2.85□□□□□ -1.95
SCN3A-204ENST00000440431 Q6ZR54 194 aa2.85□□□□□ -1.95
SCN3A-204ENST00000440431 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.84□□□□□ -1.96
SCN3A-204ENST00000440431 KMT2CQ8NEZ4 4911 aaKnown RBP2.83□□□□□ -1.96
SCN3A-204ENST00000440431 OBSCN-AS1Q96MR7 158 aa2.83□□□□□ -1.96
SCN3A-204ENST00000440431 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
SCN3A-204ENST00000440431 IGLV7-46A0A075B6I9 117 aa2.83□□□□□ -1.96
SCN3A-204ENST00000440431 KLKP1Q107X0 134 aa2.83□□□□□ -1.96
SCN3A-204ENST00000440431 Q8NDZ9 215 aa2.83□□□□□ -1.96
SCN3A-204ENST00000440431 A0A1W2PNM2 257 aa2.82□□□□□ -1.96
SCN3A-204ENST00000440431 K7EQZ3 153 aa2.82□□□□□ -1.96
SCN3A-204ENST00000440431 IGLV8-61A0A075B6I0 122 aa2.82□□□□□ -1.96
SCN3A-204ENST00000440431 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
SCN3A-204ENST00000440431 A0A1B0GU69 56 aa2.82□□□□□ -1.96
SCN3A-204ENST00000440431 DSCR10P59022 87 aa2.82□□□□□ -1.96
SCN3A-204ENST00000440431 TGP01266 2768 aa2.81□□□□□ -1.96
SCN3A-204ENST00000440431 KRTAP1-5Q9BYS1 174 aa2.81□□□□□ -1.96
SCN3A-204ENST00000440431 Q6ZSA8 131 aa2.8□□□□□ -1.96
SCN3A-204ENST00000440431 PRR26Q8N8Z3 221 aa2.8□□□□□ -1.96
SCN3A-204ENST00000440431 SEC61BP60468 96 aaKnown RBP2.79□□□□□ -1.96
SCN3A-204ENST00000440431 LCE2AQ5TA79 106 aaPredicted RBP2.79□□□□□ -1.96
SCN3A-204ENST00000440431 LCE2CQ5TA81 110 aa2.79□□□□□ -1.96
SCN3A-204ENST00000440431 LRP1BQ9NZR2 4599 aa2.79□□□□□ -1.96
SCN3A-204ENST00000440431 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
SCN3A-204ENST00000440431 RYR2Q92736 4967 aa2.79□□□□□ -1.96
SCN3A-204ENST00000440431 A8MUN3 132 aa2.79□□□□□ -1.96
SCN3A-204ENST00000440431 RYR3Q15413 4870 aa2.79□□□□□ -1.96
SCN3A-204ENST00000440431 Q5VSD8 79 aa2.78□□□□□ -1.96
SCN3A-204ENST00000440431 C9orf92A6NGG3 77 aa2.78□□□□□ -1.96
SCN3A-204ENST00000440431 KRTAP10-1P60331 282 aa2.78□□□□□ -1.96
SCN3A-204ENST00000440431 KRTAP7-1Q8IUC3 87 aa2.78□□□□□ -1.96
SCN3A-204ENST00000440431 SPANXA2-OT1Q8N9U9 137 aa2.78□□□□□ -1.96
SCN3A-204ENST00000440431 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
SCN3A-204ENST00000440431 RPS29P62273 56 aaKnown RBP2.76□□□□□ -1.97
SCN3A-204ENST00000440431 CYP4F30PQ9H0H9 118 aa2.76□□□□□ -1.97
SCN3A-204ENST00000440431 Q6ZRN7 208 aaPredicted RBP2.76□□□□□ -1.97
SCN3A-204ENST00000440431 VPS13BQ7Z7G8 4022 aa2.75□□□□□ -1.97
SCN3A-204ENST00000440431 KRTAP10-2P60368 255 aa2.75□□□□□ -1.97
SCN3A-204ENST00000440431 SRRM2Q9UQ35 2752 aaKnown RBP2.75□□□□□ -1.97
SCN3A-204ENST00000440431 UQCR11O14957 56 aa2.74□□□□□ -1.97
SCN3A-204ENST00000440431 ZCCHC13Q8WW36 166 aaKnown RBP2.74□□□□□ -1.97
SCN3A-204ENST00000440431 APOBP04114 4563 aaKnown RBP2.74□□□□□ -1.97
SCN3A-204ENST00000440431 COA5Q86WW8 74 aa2.74□□□□□ -1.97
SCN3A-204ENST00000440431 PSPHP1O15172 72 aa2.73□□□□□ -1.97
SCN3A-204ENST00000440431 A0A0G2JQZ4 141 aa2.72□□□□□ -1.97
SCN3A-204ENST00000440431 Q1T7F1 81 aa2.72□□□□□ -1.97
SCN3A-204ENST00000440431 ASB16-AS1Q495Z4 193 aa2.72□□□□□ -1.97
SCN3A-204ENST00000440431 LINC00472Q9H8W2 130 aa2.72□□□□□ -1.97
SCN3A-204ENST00000440431 KRTAP4-16G5E9R7 235 aaPredicted RBP2.72□□□□□ -1.97
SCN3A-204ENST00000440431 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
SCN3A-204ENST00000440431 MMP24-AS1A0A0U1RRL7 71 aa2.71□□□□□ -1.98
SCN3A-204ENST00000440431 H3BS24 57 aa2.71□□□□□ -1.98
SCN3A-204ENST00000440431 CSAG1Q6PB30 78 aa2.7□□□□□ -1.98
SCN3A-204ENST00000440431 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
SCN3A-204ENST00000440431 OCR1Q9BZK8 76 aa2.7□□□□□ -1.98
SCN3A-204ENST00000440431 PKHD1L1Q86WI1 4243 aa2.7□□□□□ -1.98
SCN3A-204ENST00000440431 KRTAP11-1Q8IUC1 163 aa2.7□□□□□ -1.98
SCN3A-204ENST00000440431 A8MU10 97 aa2.7□□□□□ -1.98
SCN3A-204ENST00000440431 PANO1I0J062 215 aa2.69□□□□□ -1.98
SCN3A-204ENST00000440431 Q8N1X5 172 aa2.68□□□□□ -1.98
SCN3A-204ENST00000440431 DMBT1Q9UGM3 2413 aaPredicted RBP2.68□□□□□ -1.98
SCN3A-204ENST00000440431 M0R2T5 61 aa2.68□□□□□ -1.98
SCN3A-204ENST00000440431 HRES1P13985 223 aa2.68□□□□□ -1.98
SCN3A-204ENST00000440431 HSPG2P98160 4391 aa2.67□□□□□ -1.98
SCN3A-204ENST00000440431 SPINK7P58062 85 aa2.67□□□□□ -1.98
SCN3A-204ENST00000440431 FAT1Q14517 4588 aa2.67□□□□□ -1.98
SCN3A-204ENST00000440431 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
SCN3A-204ENST00000440431 Q5VV11 94 aa2.66□□□□□ -1.98
SCN3A-204ENST00000440431 EPPK1P58107 5090 aaKnown RBP2.66□□□□□ -1.98
SCN3A-204ENST00000440431 FLG2Q5D862 2391 aaPredicted RBP2.65□□□□□ -1.99
SCN3A-204ENST00000440431 Q5W150 140 aa2.65□□□□□ -1.99
SCN3A-204ENST00000440431 S4R3F8 94 aa2.65□□□□□ -1.99
SCN3A-204ENST00000440431 KRTAP13-1Q8IUC0 172 aa2.64□□□□□ -1.99
SCN3A-204ENST00000440431 CRIPTQ9P021 101 aa2.64□□□□□ -1.99
SCN3A-204ENST00000440431 A6NN06 94 aa2.64□□□□□ -1.99
SCN3A-204ENST00000440431 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
SCN3A-204ENST00000440431 LORP23490 312 aaPredicted RBP2.63□□□□□ -1.99
SCN3A-204ENST00000440431 TNXBP22105 4242 aa2.63□□□□□ -1.99
SCN3A-204ENST00000440431 A0A087X002 238 aa2.63□□□□□ -1.99
SCN3A-204ENST00000440431 LCA10Q71F78 164 aa2.62□□□□□ -1.99
SCN3A-204ENST00000440431 KRTAP17-1Q9BYP8 105 aa2.62□□□□□ -1.99
SCN3A-204ENST00000440431 Q75L30 129 aa2.62□□□□□ -1.99
SCN3A-204ENST00000440431 DMAC1Q96GE9 116 aa2.62□□□□□ -1.99
SCN3A-204ENST00000440431 A0A1B0GU33 70 aa2.61□□□□□ -1.99
SCN3A-204ENST00000440431 Q8N9P0 234 aaPredicted RBP2.61□□□□□ -1.99
SCN3A-204ENST00000440431 CDC42SE1Q9NRR8 79 aa2.61□□□□□ -1.99
SCN3A-204ENST00000440431 KRTAP29-1A8MX34 341 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms