RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 H3BPC8 53 aa10.93□□□□□ -0.66
PTPRJ-202ENST00000440289 MRPL34Q9BQ48 92 aaKnown RBP10.93□□□□□ -0.66
PTPRJ-202ENST00000440289 HECTD4Q9Y4D8 3996 aa10.92□□□□□ -0.66
PTPRJ-202ENST00000440289 IGLV7-46A0A075B6I9 117 aa10.91□□□□□ -0.66
PTPRJ-202ENST00000440289 KRTAP13-1Q8IUC0 172 aa10.91□□□□□ -0.66
PTPRJ-202ENST00000440289 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
PTPRJ-202ENST00000440289 WWC2-AS2Q96NR7 200 aa10.9□□□□□ -0.66
PTPRJ-202ENST00000440289 DNAH8Q96JB1 4490 aa10.9□□□□□ -0.67
PTPRJ-202ENST00000440289 Q6ZRN7 208 aaPredicted RBP10.89□□□□□ -0.67
PTPRJ-202ENST00000440289 DNAH17Q9UFH2 4485 aa10.89□□□□□ -0.67
PTPRJ-202ENST00000440289 LCA10Q71F78 164 aa10.89□□□□□ -0.67
PTPRJ-202ENST00000440289 NUPR2A6NF83 97 aa10.87□□□□□ -0.67
PTPRJ-202ENST00000440289 LY6G6CO95867 125 aa10.87□□□□□ -0.67
PTPRJ-202ENST00000440289 HRES1P13985 223 aa10.87□□□□□ -0.67
PTPRJ-202ENST00000440289 Q5W150 140 aa10.87□□□□□ -0.67
PTPRJ-202ENST00000440289 TP53AIP1Q9HCN2 124 aa10.87□□□□□ -0.67
PTPRJ-202ENST00000440289 ZNF706Q9Y5V0 76 aaPredicted RBP10.85□□□□□ -0.67
PTPRJ-202ENST00000440289 ZNF861PO60384 105 aa10.85□□□□□ -0.67
PTPRJ-202ENST00000440289 DYNC2H1Q8NCM8 4307 aaKnown RBP10.84□□□□□ -0.67
PTPRJ-202ENST00000440289 SPINK7P58062 85 aa10.83□□□□□ -0.68
PTPRJ-202ENST00000440289 LOC101927531A0A1B0GV80 90 aa10.82□□□□□ -0.68
PTPRJ-202ENST00000440289 DNAH11Q96DT5 4516 aa10.81□□□□□ -0.68
PTPRJ-202ENST00000440289 Q75L30 129 aa10.74□□□□□ -0.69
PTPRJ-202ENST00000440289 Q6ZR54 194 aa10.73□□□□□ -0.69
PTPRJ-202ENST00000440289 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
PTPRJ-202ENST00000440289 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
PTPRJ-202ENST00000440289 HYDINQ4G0P3 5121 aa10.72□□□□□ -0.69
PTPRJ-202ENST00000440289 LINC00483Q53H64 154 aa10.72□□□□□ -0.69
PTPRJ-202ENST00000440289 C1orf134Q5TEV5 83 aa10.72□□□□□ -0.69
PTPRJ-202ENST00000440289 IGLV7-43P04211 117 aa10.71□□□□□ -0.69
PTPRJ-202ENST00000440289 SPINK1P00995 79 aa10.69□□□□□ -0.7
PTPRJ-202ENST00000440289 LINC00313P59037 77 aa10.66□□□□□ -0.7
PTPRJ-202ENST00000440289 ATP11AUNQ6ZP68 121 aa10.66□□□□□ -0.7
PTPRJ-202ENST00000440289 LINC01558Q9Y6Z2 57 aa10.66□□□□□ -0.7
PTPRJ-202ENST00000440289 ASB16-AS1Q495Z4 193 aa10.65□□□□□ -0.7
PTPRJ-202ENST00000440289 CDC42SE1Q9NRR8 79 aa10.65□□□□□ -0.7
PTPRJ-202ENST00000440289 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.7
PTPRJ-202ENST00000440289 LRP1BQ9NZR2 4599 aa10.65□□□□□ -0.71
PTPRJ-202ENST00000440289 KRTAP10-2P60368 255 aa10.64□□□□□ -0.71
PTPRJ-202ENST00000440289 KTN1-AS1Q86SY8 53 aa10.63□□□□□ -0.71
PTPRJ-202ENST00000440289 DNAH5Q8TE73 4624 aa10.62□□□□□ -0.71
PTPRJ-202ENST00000440289 ACYP2P14621 99 aa10.61□□□□□ -0.71
PTPRJ-202ENST00000440289 ALMS1Q8TCU4 4167 aa10.6□□□□□ -0.71
PTPRJ-202ENST00000440289 PRAC1Q96KF2 57 aa10.58□□□□□ -0.72
PTPRJ-202ENST00000440289 RBM12B-AS1Q9P1G2 102 aa10.58□□□□□ -0.72
PTPRJ-202ENST00000440289 A0A1B0GU69 56 aa10.57□□□□□ -0.72
PTPRJ-202ENST00000440289 FAT2Q9NYQ8 4349 aa10.56□□□□□ -0.72
PTPRJ-202ENST00000440289 A6NN06 94 aa10.52□□□□□ -0.73
PTPRJ-202ENST00000440289 PKHD1P08F94 4074 aa10.52□□□□□ -0.73
PTPRJ-202ENST00000440289 C7orf65Q6ZTY9 151 aa10.51□□□□□ -0.73
PTPRJ-202ENST00000440289 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
PTPRJ-202ENST00000440289 C4orf48Q5BLP8 95 aa10.49□□□□□ -0.73
PTPRJ-202ENST00000440289 Q8N1X5 172 aa10.49□□□□□ -0.73
PTPRJ-202ENST00000440289 KRTAP13-2Q52LG2 175 aa10.49□□□□□ -0.73
PTPRJ-202ENST00000440289 FAM229AH3BQW9 127 aa10.48□□□□□ -0.73
PTPRJ-202ENST00000440289 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
PTPRJ-202ENST00000440289 VPS13BQ7Z7G8 4022 aa10.46□□□□□ -0.73
PTPRJ-202ENST00000440289 KRTAP10-1P60331 282 aa10.45□□□□□ -0.74
PTPRJ-202ENST00000440289 C8orf87E5RJ46 101 aa10.44□□□□□ -0.74
PTPRJ-202ENST00000440289 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
PTPRJ-202ENST00000440289 KRTAP13-3Q3SY46 172 aa10.42□□□□□ -0.74
PTPRJ-202ENST00000440289 DMAC1Q96GE9 116 aa10.39□□□□□ -0.75
PTPRJ-202ENST00000440289 SMR3BP02814 79 aaPredicted RBP10.39□□□□□ -0.75
PTPRJ-202ENST00000440289 TYMSOSQ8TAI1 123 aa10.38□□□□□ -0.75
PTPRJ-202ENST00000440289 C9orf92A6NGG3 77 aa10.36□□□□□ -0.75
PTPRJ-202ENST00000440289 FAT1Q14517 4588 aa10.34□□□□□ -0.75
PTPRJ-202ENST00000440289 MIR22HGQ0VDD5 57 aa10.34□□□□□ -0.75
PTPRJ-202ENST00000440289 PKD1P98161 4303 aa10.33□□□□□ -0.76
PTPRJ-202ENST00000440289 FLG2Q5D862 2391 aaPredicted RBP10.32□□□□□ -0.76
PTPRJ-202ENST00000440289 UQCR11O14957 56 aa10.28□□□□□ -0.76
PTPRJ-202ENST00000440289 DMBT1Q9UGM3 2413 aaPredicted RBP10.26□□□□□ -0.77
PTPRJ-202ENST00000440289 KRTAP16-1A8MUX0 517 aa10.22□□□□□ -0.77
PTPRJ-202ENST00000440289 KRTAP1-4P0C5Y4 121 aa10.22□□□□□ -0.77
PTPRJ-202ENST00000440289 SACSQ9NZJ4 4579 aa10.16□□□□□ -0.78
PTPRJ-202ENST00000440289 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
PTPRJ-202ENST00000440289 SPATA8Q6RVD6 105 aa10.12□□□□□ -0.79
PTPRJ-202ENST00000440289 CSAG1Q6PB30 78 aa10.1□□□□□ -0.79
PTPRJ-202ENST00000440289 DYNC1H1Q14204 4646 aaKnown RBP10.1□□□□□ -0.79
PTPRJ-202ENST00000440289 KMT2CQ8NEZ4 4911 aaKnown RBP10.07□□□□□ -0.8
PTPRJ-202ENST00000440289 CRIPTQ9P021 101 aa10.06□□□□□ -0.8
PTPRJ-202ENST00000440289 Q6ZSA8 131 aa10.05□□□□□ -0.8
PTPRJ-202ENST00000440289 MYCBP2O75592 4640 aa10□□□□□ -0.81
PTPRJ-202ENST00000440289 LINC01554Q52M75 96 aa9.98□□□□□ -0.81
PTPRJ-202ENST00000440289 LRP1Q07954 4544 aaKnown RBP9.97□□□□□ -0.81
PTPRJ-202ENST00000440289 APOBP04114 4563 aaKnown RBP9.9□□□□□ -0.82
PTPRJ-202ENST00000440289 A0A1B0GU33 70 aa9.89□□□□□ -0.83
PTPRJ-202ENST00000440289 H0YAA0 97 aa9.89□□□□□ -0.83
PTPRJ-202ENST00000440289 A0A0D9SG42 100 aa9.82□□□□□ -0.84
PTPRJ-202ENST00000440289 KRTAP3-1Q9BYR8 98 aa9.81□□□□□ -0.84
PTPRJ-202ENST00000440289 KRTAP21-3Q3LHN1 58 aa9.77□□□□□ -0.84
PTPRJ-202ENST00000440289 RYR2Q92736 4967 aa9.74□□□□□ -0.85
PTPRJ-202ENST00000440289 H1FX-AS1Q4G0G2 97 aa9.73□□□□□ -0.85
PTPRJ-202ENST00000440289 PKHD1L1Q86WI1 4243 aa9.73□□□□□ -0.85
PTPRJ-202ENST00000440289 FAT3Q8TDW7 4589 aa9.69□□□□□ -0.86
PTPRJ-202ENST00000440289 A8MUU9 505 aa9.69□□□□□ -0.86
PTPRJ-202ENST00000440289 HSPG2P98160 4391 aa9.68□□□□□ -0.86
PTPRJ-202ENST00000440289 C20orf166-AS1Q96NR2 134 aa9.67□□□□□ -0.86
PTPRJ-202ENST00000440289 K7ERS5 55 aa9.67□□□□□ -0.86
PTPRJ-202ENST00000440289 RYR3Q15413 4870 aa9.66□□□□□ -0.86
PTPRJ-202ENST00000440289 COX6B2Q6YFQ2 88 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms