RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 SPCS1Q9Y6A9 102 aa8.52□□□□□ -1.05
ITGB1-207ENST00000439974 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
ITGB1-207ENST00000439974 LOC110117498A0A087WWA1 95 aa8.49□□□□□ -1.05
ITGB1-207ENST00000439974 FLGP20930 4061 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-207ENST00000439974 H3BT86 120 aa8.47□□□□□ -1.05
ITGB1-207ENST00000439974 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
ITGB1-207ENST00000439974 COX6B2Q6YFQ2 88 aa8.47□□□□□ -1.05
ITGB1-207ENST00000439974 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
ITGB1-207ENST00000439974 KRTAP10-6P60371 365 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-207ENST00000439974 IGHV6-1A0A0B4J1U7 121 aa8.45□□□□□ -1.06
ITGB1-207ENST00000439974 M0R2T5 61 aa8.44□□□□□ -1.06
ITGB1-207ENST00000439974 SMCPP49901 116 aaPredicted RBP8.44□□□□□ -1.06
ITGB1-207ENST00000439974 Q75L30 129 aa8.44□□□□□ -1.06
ITGB1-207ENST00000439974 LINC00313P59037 77 aa8.43□□□□□ -1.06
ITGB1-207ENST00000439974 PDE6GP18545 87 aa8.42□□□□□ -1.06
ITGB1-207ENST00000439974 K7EP34 96 aa8.41□□□□□ -1.06
ITGB1-207ENST00000439974 ATP11AUNQ6ZP68 121 aa8.4□□□□□ -1.06
ITGB1-207ENST00000439974 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.06
ITGB1-207ENST00000439974 A8MUU9 505 aa8.39□□□□□ -1.07
ITGB1-207ENST00000439974 KRTAP16-1A8MUX0 517 aa8.39□□□□□ -1.07
ITGB1-207ENST00000439974 PRO0461Q9UI25 63 aa8.39□□□□□ -1.07
ITGB1-207ENST00000439974 A0A1B0GVX0 72 aa8.38□□□□□ -1.07
ITGB1-207ENST00000439974 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
ITGB1-207ENST00000439974 J3KT08 172 aa8.35□□□□□ -1.07
ITGB1-207ENST00000439974 NREPQ16612 68 aa8.35□□□□□ -1.07
ITGB1-207ENST00000439974 A0A1B0GW54 56 aa8.33□□□□□ -1.08
ITGB1-207ENST00000439974 LCE2BO14633 110 aa8.32□□□□□ -1.08
ITGB1-207ENST00000439974 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
ITGB1-207ENST00000439974 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
ITGB1-207ENST00000439974 A8MWP4 228 aa8.3□□□□□ -1.08
ITGB1-207ENST00000439974 NDUFB1O75438 58 aa8.29□□□□□ -1.08
ITGB1-207ENST00000439974 GTF2H5Q6ZYL4 71 aa8.29□□□□□ -1.08
ITGB1-207ENST00000439974 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
ITGB1-207ENST00000439974 Q6ZVQ6 151 aa8.24□□□□□ -1.09
ITGB1-207ENST00000439974 PRR15Q8IV56 129 aa8.24□□□□□ -1.09
ITGB1-207ENST00000439974 K7EQZ3 153 aa8.23□□□□□ -1.09
ITGB1-207ENST00000439974 ETDBQ3ZM63 59 aa8.22□□□□□ -1.09
ITGB1-207ENST00000439974 F8W1H4 67 aa8.21□□□□□ -1.1
ITGB1-207ENST00000439974 BPY2O14599 106 aa8.21□□□□□ -1.1
ITGB1-207ENST00000439974 Q8N9L7 120 aa8.21□□□□□ -1.1
ITGB1-207ENST00000439974 LINC00846Q9NV44 126 aa8.21□□□□□ -1.1
ITGB1-207ENST00000439974 MMP24-AS1A0A0U1RRL7 71 aa8.2□□□□□ -1.1
ITGB1-207ENST00000439974 Q8N9P0 234 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-207ENST00000439974 ZCCHC13Q8WW36 166 aaKnown RBP8.16□□□□□ -1.1
ITGB1-207ENST00000439974 UBL5Q9BZL1 73 aa8.13□□□□□ -1.11
ITGB1-207ENST00000439974 USH2AO75445 5202 aa8.12□□□□□ -1.11
ITGB1-207ENST00000439974 SSPOA2VEC9 5147 aa8.12□□□□□ -1.11
ITGB1-207ENST00000439974 hDV103S1A0JD37 113 aa8.12□□□□□ -1.11
ITGB1-207ENST00000439974 WFDC13Q8IUB5 93 aa8.12□□□□□ -1.11
ITGB1-207ENST00000439974 TMEM254Q8TBM7 123 aa8.12□□□□□ -1.11
ITGB1-207ENST00000439974 MRPL34Q9BQ48 92 aaKnown RBP8.12□□□□□ -1.11
ITGB1-207ENST00000439974 A0A1B0GV90 55 aa8.1□□□□□ -1.11
ITGB1-207ENST00000439974 NDUFS5O43920 106 aa8.1□□□□□ -1.11
ITGB1-207ENST00000439974 HRES1P13985 223 aa8.1□□□□□ -1.11
ITGB1-207ENST00000439974 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
ITGB1-207ENST00000439974 SPINK7P58062 85 aa8.06□□□□□ -1.12
ITGB1-207ENST00000439974 CASC2Q6XLA1 102 aa8.06□□□□□ -1.12
ITGB1-207ENST00000439974 FAM236DA0A1B0GTK5 79 aa8.05□□□□□ -1.12
ITGB1-207ENST00000439974 FAM236CP0DP71 79 aa8.05□□□□□ -1.12
ITGB1-207ENST00000439974 MPLKIPQ8TAP9 179 aa8.03□□□□□ -1.12
ITGB1-207ENST00000439974 HCG22E2RYF7 251 aa8.01□□□□□ -1.13
ITGB1-207ENST00000439974 RBM12B-AS1Q9P1G2 102 aa8.01□□□□□ -1.13
ITGB1-207ENST00000439974 Q5W150 140 aa8□□□□□ -1.13
ITGB1-207ENST00000439974 MT2AP02795 61 aa7.98□□□□□ -1.13
ITGB1-207ENST00000439974 CXCL6P80162 114 aa7.95□□□□□ -1.14
ITGB1-207ENST00000439974 IGKV2D-30A0A075B6S6 120 aa7.94□□□□□ -1.14
ITGB1-207ENST00000439974 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
ITGB1-207ENST00000439974 IGKV2-30P06310 120 aa7.94□□□□□ -1.14
ITGB1-207ENST00000439974 MT1FP04733 61 aa7.91□□□□□ -1.14
ITGB1-207ENST00000439974 ACYP1P07311 99 aa7.91□□□□□ -1.14
ITGB1-207ENST00000439974 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
ITGB1-207ENST00000439974 FCGBPQ9Y6R7 5405 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-207ENST00000439974 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
ITGB1-207ENST00000439974 KRTAP10-10P60014 251 aa7.87□□□□□ -1.15
ITGB1-207ENST00000439974 C7orf65Q6ZTY9 151 aa7.85□□□□□ -1.15
ITGB1-207ENST00000439974 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
ITGB1-207ENST00000439974 HIST1H4AP62805 103 aaKnown RBP7.83□□□□□ -1.16
ITGB1-207ENST00000439974 ATP5EP2Q5VTU8 51 aa7.81□□□□□ -1.16
ITGB1-207ENST00000439974 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
ITGB1-207ENST00000439974 A0A087WVE0 104 aa7.79□□□□□ -1.16
ITGB1-207ENST00000439974 LINC00643Q86TS7 51 aa7.78□□□□□ -1.16
ITGB1-207ENST00000439974 C4orf26Q17RF5 130 aa7.77□□□□□ -1.17
ITGB1-207ENST00000439974 TP53AIP1Q9HCN2 124 aa7.77□□□□□ -1.17
ITGB1-207ENST00000439974 SYNE2Q8WXH0 6885 aaKnown RBP7.76□□□□□ -1.17
ITGB1-207ENST00000439974 MACF1Q9UPN3 7388 aaKnown RBP7.75□□□□□ -1.17
ITGB1-207ENST00000439974 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
ITGB1-207ENST00000439974 J3QR89 54 aa7.69□□□□□ -1.18
ITGB1-207ENST00000439974 TRAV22A0A0B4J277 110 aa7.66□□□□□ -1.18
ITGB1-207ENST00000439974 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
ITGB1-207ENST00000439974 CYP4F30PQ9H0H9 118 aa7.64□□□□□ -1.19
ITGB1-207ENST00000439974 H0Y9P7 68 aa7.63□□□□□ -1.19
ITGB1-207ENST00000439974 UQCRQO14949 82 aa7.63□□□□□ -1.19
ITGB1-207ENST00000439974 KRTAP19-6Q3LI70 58 aa7.63□□□□□ -1.19
ITGB1-207ENST00000439974 C1orf64Q8NEQ6 169 aa7.63□□□□□ -1.19
ITGB1-207ENST00000439974 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.19
ITGB1-207ENST00000439974 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
ITGB1-207ENST00000439974 OCR1Q9BZK8 76 aa7.55□□□□□ -1.2
ITGB1-207ENST00000439974 MT-ATP8P03928 68 aa7.54□□□□□ -1.2
ITGB1-207ENST00000439974 S4R3F8 94 aa7.54□□□□□ -1.2
ITGB1-207ENST00000439974 ATOX1O00244 68 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms