RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 NPC2P61916 151 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 CATR1Q13166 79 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 NMSQ5H8A3 153 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 C9orf153Q5TBE3 101 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 Q96NJ1 140 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 F6UZH7 168 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 SCGB1A1P11684 91 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 FGF7P21781 194 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 PPP3R1P63098 170 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 H1FX-AS1Q4G0G2 97 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 C5orf38Q86SI9 138 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 WFDC13Q8IUB5 93 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 PYDC1Q8WXC3 89 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 TMEM242Q9NWH2 141 aa0.19□□□□□ -2.38
VPS41-207ENST00000439468 TRAV21A0A0B4J279 112 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 HMGN1P05114 100 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 COX4I1P13073 169 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 SMIM11AP58511 58 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 CKS1BP61024 79 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 CYP2G1PQ6ZSU1 146 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 SMIM3Q9BZL3 60 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 FXYD6Q9H0Q3 95 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 CRIPTQ9P021 101 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 GSKIPQ9P0R6 139 aa0.18□□□□□ -2.38
VPS41-207ENST00000439468 A0A0G2JND7 137 aa0.17□□□□□ -2.38
VPS41-207ENST00000439468 H3BVH4 76 aa0.17□□□□□ -2.38
VPS41-207ENST00000439468 IGLC6P0CF74 106 aa0.17□□□□□ -2.38
VPS41-207ENST00000439468 HIST1H1DP16402 221 aaKnown RBP0.17□□□□□ -2.38
VPS41-207ENST00000439468 MIC13Q5XKP0 118 aa0.17□□□□□ -2.38
VPS41-207ENST00000439468 VPS25Q9BRG1 176 aa0.17□□□□□ -2.38
VPS41-207ENST00000439468 SPANXA1Q9NS26 97 aa0.17□□□□□ -2.38
VPS41-207ENST00000439468 SCN3BQ9NY72 215 aa0.17□□□□□ -2.38
VPS41-207ENST00000439468 LENEPQ9Y5L5 61 aa0.17□□□□□ -2.38
VPS41-207ENST00000439468 SPRR1AP35321 89 aa0.16□□□□□ -2.38
VPS41-207ENST00000439468 CRIP1P50238 77 aa0.16□□□□□ -2.38
VPS41-207ENST00000439468 NCS1P62166 190 aa0.16□□□□□ -2.38
VPS41-207ENST00000439468 C12orf73Q69YU5 71 aa0.16□□□□□ -2.38
VPS41-207ENST00000439468 PDCD10Q9BUL8 212 aa0.16□□□□□ -2.38
VPS41-207ENST00000439468 CDC42SE2Q9NRR3 84 aa0.16□□□□□ -2.38
VPS41-207ENST00000439468 SPANXCQ9NY87 97 aa0.16□□□□□ -2.38
VPS41-207ENST00000439468 F2Z2F3 143 aa0.15□□□□□ -2.39
VPS41-207ENST00000439468 M0QY20 66 aa0.15□□□□□ -2.39
VPS41-207ENST00000439468 ARMS2P0C7Q2 107 aa0.15□□□□□ -2.39
VPS41-207ENST00000439468 ARPC4P59998 168 aa0.15□□□□□ -2.39
VPS41-207ENST00000439468 RPS25P62851 125 aaKnown RBP0.15□□□□□ -2.39
VPS41-207ENST00000439468 LINC01545Q5VT33 79 aa0.15□□□□□ -2.39
VPS41-207ENST00000439468 C20orf197Q8N268 126 aa0.15□□□□□ -2.39
VPS41-207ENST00000439468 CEBPZOSA8MTT3 80 aa0.14□□□□□ -2.39
VPS41-207ENST00000439468 IL5P05113 134 aa0.14□□□□□ -2.39
VPS41-207ENST00000439468 ALKAL2Q6UX46 152 aa0.14□□□□□ -2.39
VPS41-207ENST00000439468 ACBD7Q8N6N7 88 aa0.14□□□□□ -2.39
VPS41-207ENST00000439468 PRR15LQ9BU68 103 aa0.14□□□□□ -2.39
VPS41-207ENST00000439468 ARL2-SNX15V9GYD0 113 aa0.14□□□□□ -2.39
VPS41-207ENST00000439468 SPRR1BP22528 89 aa0.13□□□□□ -2.39
VPS41-207ENST00000439468 CCDC58Q4VC31 144 aa0.13□□□□□ -2.39
VPS41-207ENST00000439468 C10orf113Q5VZT2 155 aa0.13□□□□□ -2.39
VPS41-207ENST00000439468 Q6ZUT4 128 aa0.13□□□□□ -2.39
VPS41-207ENST00000439468 FAM167A-AS1Q96KT0 104 aa0.13□□□□□ -2.39
VPS41-207ENST00000439468 BATF3Q9NR55 127 aa0.13□□□□□ -2.39
VPS41-207ENST00000439468 COPZ2Q9P299 210 aa0.13□□□□□ -2.39
VPS41-207ENST00000439468 ERG28Q9UKR5 140 aa0.13□□□□□ -2.39
VPS41-207ENST00000439468 IAPPP10997 89 aa0.12□□□□□ -2.39
VPS41-207ENST00000439468 PPP1R1CQ8WVI7 109 aa0.12□□□□□ -2.39
VPS41-207ENST00000439468 MGST2Q99735 147 aa0.12□□□□□ -2.39
VPS41-207ENST00000439468 LOC105371267A0A1B0GV96 52 aa0.11□□□□□ -2.39
VPS41-207ENST00000439468 D6R8Y8 96 aa0.11□□□□□ -2.39
VPS41-207ENST00000439468 CCDC179H3BU77 68 aa0.11□□□□□ -2.39
VPS41-207ENST00000439468 NCR2O95944 276 aa0.11□□□□□ -2.39
VPS41-207ENST00000439468 Q6ZRX8 168 aa0.11□□□□□ -2.39
VPS41-207ENST00000439468 COX7B2Q8TF08 81 aa0.11□□□□□ -2.39
VPS41-207ENST00000439468 PRO1933Q9H354 126 aa0.11□□□□□ -2.39
VPS41-207ENST00000439468 KCNQ1DNQ9H478 68 aa0.11□□□□□ -2.39
VPS41-207ENST00000439468 ETDCA0A1B0GVM5 59 aa0.1□□□□□ -2.39
VPS41-207ENST00000439468 F8VRH5 84 aa0.1□□□□□ -2.39
VPS41-207ENST00000439468 MGPP08493 103 aa0.1□□□□□ -2.39
VPS41-207ENST00000439468 GNG2P59768 71 aa0.1□□□□□ -2.39
VPS41-207ENST00000439468 RRAS2P62070 204 aaPredicted RBP0.1□□□□□ -2.39
VPS41-207ENST00000439468 Q8IZM0 81 aa0.1□□□□□ -2.39
VPS41-207ENST00000439468 RPL39LQ96EH5 51 aaKnown RBP0.1□□□□□ -2.39
VPS41-207ENST00000439468 AMELXQ99217 191 aa0.1□□□□□ -2.39
VPS41-207ENST00000439468 PAIP2BQ9ULR5 123 aaKnown RBP0.1□□□□□ -2.39
VPS41-207ENST00000439468 S4R3F8 94 aa0.1□□□□□ -2.39
VPS41-207ENST00000439468 K7ERU9 68 aa0.09□□□□□ -2.4
VPS41-207ENST00000439468 SSBP1Q04837 148 aaKnown RBP0.09□□□□□ -2.4
VPS41-207ENST00000439468 SMIM11BQ8TCY0 68 aa0.09□□□□□ -2.4
VPS41-207ENST00000439468 NMES1Q9C002 83 aa0.09□□□□□ -2.4
VPS41-207ENST00000439468 LINC00472Q9H8W2 130 aa0.09□□□□□ -2.4
VPS41-207ENST00000439468 TOMM7Q9P0U1 55 aa0.09□□□□□ -2.4
VPS41-207ENST00000439468 TRBV7-7A0A0K0K1E9 115 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 TRBV10-3A0A0K0K1G6 114 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 C7orf77A4D0Y5 90 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 F8WEM9 126 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 ACYP2P14621 99 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 SMCO1Q147U7 214 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 SPANXN1Q5VSR9 72 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 PFDN5Q99471 154 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 SAR1AQ9NR31 198 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 AP4S1Q9Y587 144 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 V9GYV3 84 aa0.08□□□□□ -2.4
VPS41-207ENST00000439468 I3L3M4 83 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms