RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 Q8N377 158 aa4.37□□□□□ -1.71
LINC00578-201ENST00000439009 HIST1H4AP62805 103 aaKnown RBP4.36□□□□□ -1.71
LINC00578-201ENST00000439009 LINC00483Q53H64 154 aa4.36□□□□□ -1.71
LINC00578-201ENST00000439009 F8WEM9 126 aa4.35□□□□□ -1.71
LINC00578-201ENST00000439009 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
LINC00578-201ENST00000439009 CXCL6P80162 114 aa4.35□□□□□ -1.71
LINC00578-201ENST00000439009 DEFB105AQ8NG35 78 aa4.35□□□□□ -1.71
LINC00578-201ENST00000439009 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
LINC00578-201ENST00000439009 IGLV5-48A0A075B6I7 105 aa4.34□□□□□ -1.71
LINC00578-201ENST00000439009 UQCRQO14949 82 aa4.34□□□□□ -1.71
LINC00578-201ENST00000439009 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
LINC00578-201ENST00000439009 Q6ZVQ6 151 aa4.34□□□□□ -1.71
LINC00578-201ENST00000439009 SSBP3-AS1Q7Z2R9 100 aa4.34□□□□□ -1.71
LINC00578-201ENST00000439009 NREPQ16612 68 aa4.33□□□□□ -1.72
LINC00578-201ENST00000439009 SMIM20Q8N5G0 67 aa4.33□□□□□ -1.72
LINC00578-201ENST00000439009 COX7CP15954 63 aa4.32□□□□□ -1.72
LINC00578-201ENST00000439009 Q9BRP9 147 aa4.32□□□□□ -1.72
LINC00578-201ENST00000439009 CCDC179H3BU77 68 aa4.31□□□□□ -1.72
LINC00578-201ENST00000439009 C9orf153Q5TBE3 101 aa4.31□□□□□ -1.72
LINC00578-201ENST00000439009 SERP2Q8N6R1 65 aa4.3□□□□□ -1.72
LINC00578-201ENST00000439009 A0A087WVE0 104 aa4.29□□□□□ -1.72
LINC00578-201ENST00000439009 BPY2O14599 106 aa4.29□□□□□ -1.72
LINC00578-201ENST00000439009 MOBPQ13875 183 aa4.29□□□□□ -1.72
LINC00578-201ENST00000439009 PCOTHQ58A44 107 aa4.29□□□□□ -1.72
LINC00578-201ENST00000439009 IGLV8-61A0A075B6I0 122 aa4.28□□□□□ -1.72
LINC00578-201ENST00000439009 IGLV9-49A0A0B4J1Y8 123 aa4.28□□□□□ -1.72
LINC00578-201ENST00000439009 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
LINC00578-201ENST00000439009 ERC2-IT1O76042 136 aa4.28□□□□□ -1.72
LINC00578-201ENST00000439009 ST20-AS1Q8NBB2 130 aa4.28□□□□□ -1.72
LINC00578-201ENST00000439009 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
LINC00578-201ENST00000439009 SPRR1BP22528 89 aa4.27□□□□□ -1.73
LINC00578-201ENST00000439009 TRAV7A0A075B6U4 112 aa4.26□□□□□ -1.73
LINC00578-201ENST00000439009 A0A1W2PNM2 257 aa4.25□□□□□ -1.73
LINC00578-201ENST00000439009 SMIM29Q86T20 159 aa4.25□□□□□ -1.73
LINC00578-201ENST00000439009 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
LINC00578-201ENST00000439009 TMEM258P61165 79 aa4.23□□□□□ -1.73
LINC00578-201ENST00000439009 IGFL1Q6UW32 110 aa4.23□□□□□ -1.73
LINC00578-201ENST00000439009 SS18L2Q9UHA2 77 aa4.23□□□□□ -1.73
LINC00578-201ENST00000439009 M0R2T5 61 aa4.22□□□□□ -1.73
LINC00578-201ENST00000439009 IGKV4-1P06312 121 aa4.22□□□□□ -1.73
LINC00578-201ENST00000439009 LIMD2Q9BT23 127 aa4.21□□□□□ -1.74
LINC00578-201ENST00000439009 C9orf92A6NGG3 77 aa4.2□□□□□ -1.74
LINC00578-201ENST00000439009 NDUFC1O43677 76 aa4.2□□□□□ -1.74
LINC00578-201ENST00000439009 A0A087WSZ3 146 aa4.19□□□□□ -1.74
LINC00578-201ENST00000439009 J3KT08 172 aa4.19□□□□□ -1.74
LINC00578-201ENST00000439009 CD164Q04900 197 aa4.18□□□□□ -1.74
LINC00578-201ENST00000439009 KLKP1Q107X0 134 aa4.18□□□□□ -1.74
LINC00578-201ENST00000439009 Q5XG85 94 aa4.18□□□□□ -1.74
LINC00578-201ENST00000439009 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
LINC00578-201ENST00000439009 C20orf197Q8N268 126 aa4.18□□□□□ -1.74
LINC00578-201ENST00000439009 USH2AO75445 5202 aa4.17□□□□□ -1.74
LINC00578-201ENST00000439009 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
LINC00578-201ENST00000439009 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
LINC00578-201ENST00000439009 HCG22E2RYF7 251 aa4.16□□□□□ -1.74
LINC00578-201ENST00000439009 NDUFB1O75438 58 aa4.16□□□□□ -1.74
LINC00578-201ENST00000439009 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
LINC00578-201ENST00000439009 DSCR10P59022 87 aa4.16□□□□□ -1.74
LINC00578-201ENST00000439009 Q8N9L7 120 aa4.16□□□□□ -1.74
LINC00578-201ENST00000439009 K7EQZ3 153 aa4.15□□□□□ -1.75
LINC00578-201ENST00000439009 C1orf195Q5TG92 126 aa4.15□□□□□ -1.75
LINC00578-201ENST00000439009 HRCT1Q6UXD1 115 aa4.15□□□□□ -1.75
LINC00578-201ENST00000439009 FAM236DA0A1B0GTK5 79 aa4.14□□□□□ -1.75
LINC00578-201ENST00000439009 A8MWP4 228 aa4.14□□□□□ -1.75
LINC00578-201ENST00000439009 FAM236CP0DP71 79 aa4.14□□□□□ -1.75
LINC00578-201ENST00000439009 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
LINC00578-201ENST00000439009 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
LINC00578-201ENST00000439009 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
LINC00578-201ENST00000439009 OCR1Q9BZK8 76 aa4.14□□□□□ -1.75
LINC00578-201ENST00000439009 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
LINC00578-201ENST00000439009 C5orf47Q569G3 176 aa4.13□□□□□ -1.75
LINC00578-201ENST00000439009 PRR15Q8IV56 129 aa4.13□□□□□ -1.75
LINC00578-201ENST00000439009 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
LINC00578-201ENST00000439009 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
LINC00578-201ENST00000439009 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
LINC00578-201ENST00000439009 H7BZZ5 65 aa4.11□□□□□ -1.75
LINC00578-201ENST00000439009 MP68P56378 58 aa4.11□□□□□ -1.75
LINC00578-201ENST00000439009 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
LINC00578-201ENST00000439009 SNURFQ9Y675 71 aa4.11□□□□□ -1.75
LINC00578-201ENST00000439009 H3BPC8 53 aa4.1□□□□□ -1.75
LINC00578-201ENST00000439009 CASC2Q6XLA1 102 aa4.1□□□□□ -1.75
LINC00578-201ENST00000439009 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
LINC00578-201ENST00000439009 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.75
LINC00578-201ENST00000439009 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
LINC00578-201ENST00000439009 SERP1Q9Y6X1 66 aa4.09□□□□□ -1.75
LINC00578-201ENST00000439009 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
LINC00578-201ENST00000439009 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
LINC00578-201ENST00000439009 TP53AIP1Q9HCN2 124 aa4.07□□□□□ -1.76
LINC00578-201ENST00000439009 hDV103S1A0JD37 113 aa4.06□□□□□ -1.76
LINC00578-201ENST00000439009 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
LINC00578-201ENST00000439009 MMP24-AS1A0A0U1RRL7 71 aa4.05□□□□□ -1.76
LINC00578-201ENST00000439009 A0A1B0GVX0 72 aa4.05□□□□□ -1.76
LINC00578-201ENST00000439009 Q75L30 129 aa4.05□□□□□ -1.76
LINC00578-201ENST00000439009 C8orf17Q9NRJ1 99 aa4.05□□□□□ -1.76
LINC00578-201ENST00000439009 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
LINC00578-201ENST00000439009 H0Y9P7 68 aa4.04□□□□□ -1.76
LINC00578-201ENST00000439009 ATP11AUNQ6ZP68 121 aa4.04□□□□□ -1.76
LINC00578-201ENST00000439009 Q96NJ1 140 aa4.04□□□□□ -1.76
LINC00578-201ENST00000439009 MT2AP02795 61 aa4.03□□□□□ -1.76
LINC00578-201ENST00000439009 ZCCHC13Q8WW36 166 aaKnown RBP4.03□□□□□ -1.76
LINC00578-201ENST00000439009 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms