RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
CSTF3-203ENST00000438862 F8WEM9 126 aa6.05□□□□□ -1.44
CSTF3-203ENST00000438862 JMJD7-PLA2G4BH0Y9G9 81 aa6.04□□□□□ -1.44
CSTF3-203ENST00000438862 Q6JHZ5 121 aa6.04□□□□□ -1.44
CSTF3-203ENST00000438862 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
CSTF3-203ENST00000438862 F8W1H4 67 aa6.03□□□□□ -1.44
CSTF3-203ENST00000438862 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
CSTF3-203ENST00000438862 USH2AO75445 5202 aa6.02□□□□□ -1.44
CSTF3-203ENST00000438862 IGLV9-49A0A0B4J1Y8 123 aa6.01□□□□□ -1.45
CSTF3-203ENST00000438862 MOBPQ13875 183 aa6.01□□□□□ -1.45
CSTF3-203ENST00000438862 PRO0461Q9UI25 63 aa6.01□□□□□ -1.45
CSTF3-203ENST00000438862 PDE6GP18545 87 aa6□□□□□ -1.45
CSTF3-203ENST00000438862 RBM3P98179 157 aaKnown RBP6□□□□□ -1.45
CSTF3-203ENST00000438862 CD164Q04900 197 aa6□□□□□ -1.45
CSTF3-203ENST00000438862 C9orf153Q5TBE3 101 aa6□□□□□ -1.45
CSTF3-203ENST00000438862 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
CSTF3-203ENST00000438862 A0A1B0GV90 55 aa5.98□□□□□ -1.45
CSTF3-203ENST00000438862 TRBV7-4A0A0J9YYF1 115 aa5.97□□□□□ -1.45
CSTF3-203ENST00000438862 Q6Q795 121 aa5.97□□□□□ -1.45
CSTF3-203ENST00000438862 DSCR8Q96T75 97 aa5.97□□□□□ -1.45
CSTF3-203ENST00000438862 SYNE2Q8WXH0 6885 aaKnown RBP5.96□□□□□ -1.45
CSTF3-203ENST00000438862 A0A1B0GW54 56 aa5.96□□□□□ -1.46
CSTF3-203ENST00000438862 IGFL1Q6UW32 110 aa5.96□□□□□ -1.46
CSTF3-203ENST00000438862 MACF1Q9UPN3 7388 aaKnown RBP5.95□□□□□ -1.46
CSTF3-203ENST00000438862 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
CSTF3-203ENST00000438862 TEN1Q86WV5 123 aa5.95□□□□□ -1.46
CSTF3-203ENST00000438862 MTURNQ8N3F0 131 aa5.95□□□□□ -1.46
CSTF3-203ENST00000438862 Q5XG85 94 aa5.94□□□□□ -1.46
CSTF3-203ENST00000438862 C9orf92A6NGG3 77 aa5.93□□□□□ -1.46
CSTF3-203ENST00000438862 TRBV7-7A0A0K0K1E9 115 aa5.91□□□□□ -1.46
CSTF3-203ENST00000438862 CCKP06307 115 aa5.91□□□□□ -1.46
CSTF3-203ENST00000438862 Q6ZQT0 140 aa5.91□□□□□ -1.46
CSTF3-203ENST00000438862 LIMD2Q9BT23 127 aa5.91□□□□□ -1.46
CSTF3-203ENST00000438862 A0A1W2PNM2 257 aa5.9□□□□□ -1.46
CSTF3-203ENST00000438862 ETDBQ3ZM63 59 aa5.9□□□□□ -1.46
CSTF3-203ENST00000438862 C14orf132Q9NPU4 83 aa5.9□□□□□ -1.46
CSTF3-203ENST00000438862 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
CSTF3-203ENST00000438862 SS18L2Q9UHA2 77 aa5.89□□□□□ -1.47
CSTF3-203ENST00000438862 A0A0G2JQZ4 141 aa5.87□□□□□ -1.47
CSTF3-203ENST00000438862 A0A1B0GV72 72 aa5.87□□□□□ -1.47
CSTF3-203ENST00000438862 HRCT1Q6UXD1 115 aa5.86□□□□□ -1.47
CSTF3-203ENST00000438862 A0A087WSZ3 146 aa5.85□□□□□ -1.47
CSTF3-203ENST00000438862 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
CSTF3-203ENST00000438862 KRTAP6-3Q3LI67 103 aa5.85□□□□□ -1.47
CSTF3-203ENST00000438862 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
CSTF3-203ENST00000438862 VPS25Q9BRG1 176 aa5.84□□□□□ -1.47
CSTF3-203ENST00000438862 ACYP1P07311 99 aa5.82□□□□□ -1.48
CSTF3-203ENST00000438862 FAM240AA0A1B0GVK7 77 aa5.81□□□□□ -1.48
CSTF3-203ENST00000438862 J3QR89 54 aa5.8□□□□□ -1.48
CSTF3-203ENST00000438862 C1orf195Q5TG92 126 aa5.8□□□□□ -1.48
CSTF3-203ENST00000438862 LINC00472Q9H8W2 130 aa5.79□□□□□ -1.48
CSTF3-203ENST00000438862 J3KT08 172 aa5.78□□□□□ -1.48
CSTF3-203ENST00000438862 NREPQ16612 68 aa5.78□□□□□ -1.48
CSTF3-203ENST00000438862 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
CSTF3-203ENST00000438862 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.76□□□□□ -1.49
CSTF3-203ENST00000438862 Q96NJ1 140 aa5.76□□□□□ -1.49
CSTF3-203ENST00000438862 MT2AP02795 61 aa5.75□□□□□ -1.49
CSTF3-203ENST00000438862 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
CSTF3-203ENST00000438862 Q6ZVQ6 151 aa5.74□□□□□ -1.49
CSTF3-203ENST00000438862 K7ERU9 68 aa5.72□□□□□ -1.49
CSTF3-203ENST00000438862 IGKV4-1P06312 121 aa5.72□□□□□ -1.49
CSTF3-203ENST00000438862 SIGMAR1Q99720 223 aa5.72□□□□□ -1.49
CSTF3-203ENST00000438862 BPY2O14599 106 aa5.7□□□□□ -1.5
CSTF3-203ENST00000438862 NDUFB1O75438 58 aa5.7□□□□□ -1.5
CSTF3-203ENST00000438862 MT1FP04733 61 aa5.7□□□□□ -1.5
CSTF3-203ENST00000438862 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
CSTF3-203ENST00000438862 A8MWP4 228 aa5.69□□□□□ -1.5
CSTF3-203ENST00000438862 CXCL6P80162 114 aa5.69□□□□□ -1.5
CSTF3-203ENST00000438862 DEFB116Q30KQ4 102 aa5.68□□□□□ -1.5
CSTF3-203ENST00000438862 KRTAP5-11Q6L8G4 156 aa5.68□□□□□ -1.5
CSTF3-203ENST00000438862 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
CSTF3-203ENST00000438862 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
CSTF3-203ENST00000438862 DSCR10P59022 87 aa5.67□□□□□ -1.5
CSTF3-203ENST00000438862 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
CSTF3-203ENST00000438862 ATP5EP2Q5VTU8 51 aa5.67□□□□□ -1.5
CSTF3-203ENST00000438862 LINC00643Q86TS7 51 aa5.67□□□□□ -1.5
CSTF3-203ENST00000438862 A0A1B0GVX0 72 aa5.66□□□□□ -1.5
CSTF3-203ENST00000438862 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
CSTF3-203ENST00000438862 PRR15Q8IV56 129 aa5.66□□□□□ -1.5
CSTF3-203ENST00000438862 IGKV3D-7A0A0C4DH55 119 aa5.65□□□□□ -1.5
CSTF3-203ENST00000438862 LINC00313P59037 77 aa5.64□□□□□ -1.51
CSTF3-203ENST00000438862 NEBP20929 6669 aa5.63□□□□□ -1.51
CSTF3-203ENST00000438862 IGHV6-1A0A0B4J1U7 121 aa5.62□□□□□ -1.51
CSTF3-203ENST00000438862 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
CSTF3-203ENST00000438862 K7EQZ3 153 aa5.61□□□□□ -1.51
CSTF3-203ENST00000438862 Q75L30 129 aa5.61□□□□□ -1.51
CSTF3-203ENST00000438862 C8orf17Q9NRJ1 99 aa5.6□□□□□ -1.51
CSTF3-203ENST00000438862 KRTAP16-1A8MUX0 517 aa5.57□□□□□ -1.52
CSTF3-203ENST00000438862 NOTCH2NLQ7Z3S9 236 aa5.57□□□□□ -1.52
CSTF3-203ENST00000438862 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
CSTF3-203ENST00000438862 IMUPQ9GZP8 106 aa5.57□□□□□ -1.52
CSTF3-203ENST00000438862 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
CSTF3-203ENST00000438862 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
CSTF3-203ENST00000438862 A8MUU9 505 aa5.56□□□□□ -1.52
CSTF3-203ENST00000438862 Q8N9L7 120 aa5.56□□□□□ -1.52
CSTF3-203ENST00000438862 TMEM254Q8TBM7 123 aa5.56□□□□□ -1.52
CSTF3-203ENST00000438862 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
CSTF3-203ENST00000438862 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
CSTF3-203ENST00000438862 HIST1H4AP62805 103 aaKnown RBP5.53□□□□□ -1.52
CSTF3-203ENST00000438862 CASC2Q6XLA1 102 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms