RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
TTC3-209ENST00000438055 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
TTC3-209ENST00000438055 LIMD2Q9BT23 127 aa9.9□□□□□ -0.83
TTC3-209ENST00000438055 Q8N9P0 234 aaPredicted RBP9.89□□□□□ -0.83
TTC3-209ENST00000438055 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
TTC3-209ENST00000438055 A6NED7 52 aa9.88□□□□□ -0.83
TTC3-209ENST00000438055 SPTSSBQ8NFR3 76 aa9.87□□□□□ -0.83
TTC3-209ENST00000438055 Q5VV11 94 aa9.84□□□□□ -0.83
TTC3-209ENST00000438055 PRKDCP78527 4128 aaKnown RBP9.83□□□□□ -0.84
TTC3-209ENST00000438055 SSBP3-AS1Q7Z2R9 100 aa9.83□□□□□ -0.84
TTC3-209ENST00000438055 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
TTC3-209ENST00000438055 Q5W150 140 aa9.82□□□□□ -0.84
TTC3-209ENST00000438055 A8MU10 97 aa9.81□□□□□ -0.84
TTC3-209ENST00000438055 LINC00313P59037 77 aa9.81□□□□□ -0.84
TTC3-209ENST00000438055 LOC101927531A0A1B0GV80 90 aa9.8□□□□□ -0.84
TTC3-209ENST00000438055 KMT2AQ03164 3969 aa9.8□□□□□ -0.84
TTC3-209ENST00000438055 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
TTC3-209ENST00000438055 VPS13DQ5THJ4 4388 aa9.77□□□□□ -0.84
TTC3-209ENST00000438055 PMAIP1Q13794 54 aa9.77□□□□□ -0.84
TTC3-209ENST00000438055 HRES1P13985 223 aa9.77□□□□□ -0.85
TTC3-209ENST00000438055 PRR26Q8N8Z3 221 aa9.76□□□□□ -0.85
TTC3-209ENST00000438055 DYNC2H1Q8NCM8 4307 aaKnown RBP9.75□□□□□ -0.85
TTC3-209ENST00000438055 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
TTC3-209ENST00000438055 FRAS1Q86XX4 4008 aa9.74□□□□□ -0.85
TTC3-209ENST00000438055 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
TTC3-209ENST00000438055 DNAH8Q96JB1 4490 aa9.71□□□□□ -0.85
TTC3-209ENST00000438055 IGKV2D-30A0A075B6S6 120 aa9.7□□□□□ -0.86
TTC3-209ENST00000438055 IGKV2-30P06310 120 aa9.7□□□□□ -0.86
TTC3-209ENST00000438055 KRTAP13-2Q52LG2 175 aa9.69□□□□□ -0.86
TTC3-209ENST00000438055 PLA2G1BP04054 148 aaKnown RBP9.69□□□□□ -0.86
TTC3-209ENST00000438055 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
TTC3-209ENST00000438055 ACYP2P14621 99 aa9.68□□□□□ -0.86
TTC3-209ENST00000438055 DNAH2Q9P225 4427 aa9.67□□□□□ -0.86
TTC3-209ENST00000438055 HECTD4Q9Y4D8 3996 aa9.66□□□□□ -0.86
TTC3-209ENST00000438055 Q75L30 129 aa9.65□□□□□ -0.86
TTC3-209ENST00000438055 DNHD1Q96M86 4753 aa9.65□□□□□ -0.86
TTC3-209ENST00000438055 TYMSOSQ8TAI1 123 aa9.65□□□□□ -0.86
TTC3-209ENST00000438055 DNAH17Q9UFH2 4485 aa9.64□□□□□ -0.87
TTC3-209ENST00000438055 LINC01558Q9Y6Z2 57 aa9.63□□□□□ -0.87
TTC3-209ENST00000438055 DNAH11Q96DT5 4516 aa9.61□□□□□ -0.87
TTC3-209ENST00000438055 LCA10Q71F78 164 aa9.61□□□□□ -0.87
TTC3-209ENST00000438055 SPINK7P58062 85 aa9.58□□□□□ -0.88
TTC3-209ENST00000438055 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
TTC3-209ENST00000438055 KRTAP13-3Q3SY46 172 aa9.55□□□□□ -0.88
TTC3-209ENST00000438055 DNAH6Q9C0G6 4158 aa9.54□□□□□ -0.88
TTC3-209ENST00000438055 CDC42SE1Q9NRR8 79 aa9.54□□□□□ -0.88
TTC3-209ENST00000438055 Q6ZSA8 131 aa9.53□□□□□ -0.88
TTC3-209ENST00000438055 SPINK1P00995 79 aa9.53□□□□□ -0.88
TTC3-209ENST00000438055 ATP11AUNQ6ZP68 121 aa9.53□□□□□ -0.88
TTC3-209ENST00000438055 C7orf65Q6ZTY9 151 aa9.53□□□□□ -0.88
TTC3-209ENST00000438055 KRTAP1-4P0C5Y4 121 aa9.51□□□□□ -0.89
TTC3-209ENST00000438055 A0A1B0GU69 56 aa9.5□□□□□ -0.89
TTC3-209ENST00000438055 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
TTC3-209ENST00000438055 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
TTC3-209ENST00000438055 LINC00304Q8N9R0 145 aa9.47□□□□□ -0.89
TTC3-209ENST00000438055 DNAH5Q8TE73 4624 aa9.44□□□□□ -0.9
TTC3-209ENST00000438055 Q8N1X5 172 aa9.44□□□□□ -0.9
TTC3-209ENST00000438055 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
TTC3-209ENST00000438055 SEC61GP60059 68 aa9.43□□□□□ -0.9
TTC3-209ENST00000438055 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
TTC3-209ENST00000438055 KTN1-AS1Q86SY8 53 aa9.38□□□□□ -0.91
TTC3-209ENST00000438055 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
TTC3-209ENST00000438055 HYDINQ4G0P3 5121 aa9.33□□□□□ -0.92
TTC3-209ENST00000438055 A6NN06 94 aa9.31□□□□□ -0.92
TTC3-209ENST00000438055 UQCR11O14957 56 aa9.28□□□□□ -0.92
TTC3-209ENST00000438055 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
TTC3-209ENST00000438055 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.93
TTC3-209ENST00000438055 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.94
TTC3-209ENST00000438055 RBM12B-AS1Q9P1G2 102 aa9.19□□□□□ -0.94
TTC3-209ENST00000438055 FAT2Q9NYQ8 4349 aa9.16□□□□□ -0.94
TTC3-209ENST00000438055 PRAC1Q96KF2 57 aa9.16□□□□□ -0.94
TTC3-209ENST00000438055 PKD1P98161 4303 aa9.14□□□□□ -0.95
TTC3-209ENST00000438055 FAT1Q14517 4588 aa9.13□□□□□ -0.95
TTC3-209ENST00000438055 PKHD1P08F94 4074 aa9.13□□□□□ -0.95
TTC3-209ENST00000438055 FLG2Q5D862 2391 aaPredicted RBP9.12□□□□□ -0.95
TTC3-209ENST00000438055 SPATA8Q6RVD6 105 aa9.12□□□□□ -0.95
TTC3-209ENST00000438055 RPS29P62273 56 aaKnown RBP9.12□□□□□ -0.95
TTC3-209ENST00000438055 ADM2Q7Z4H4 148 aa9.08□□□□□ -0.96
TTC3-209ENST00000438055 DYNC1H1Q14204 4646 aaKnown RBP9.06□□□□□ -0.96
TTC3-209ENST00000438055 A8MUU9 505 aa9.04□□□□□ -0.96
TTC3-209ENST00000438055 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
TTC3-209ENST00000438055 A0A1B0GVY2 172 aa8.99□□□□□ -0.97
TTC3-209ENST00000438055 KRTAP21-3Q3LHN1 58 aa8.98□□□□□ -0.97
TTC3-209ENST00000438055 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
TTC3-209ENST00000438055 A0A1B0GU33 70 aa8.95□□□□□ -0.98
TTC3-209ENST00000438055 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
TTC3-209ENST00000438055 KRTAP10-4P60372 401 aaPredicted RBP8.92□□□□□ -0.98
TTC3-209ENST00000438055 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
TTC3-209ENST00000438055 Q5VSD8 79 aa8.87□□□□□ -0.99
TTC3-209ENST00000438055 H0YAA0 97 aa8.85□□□□□ -0.99
TTC3-209ENST00000438055 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
TTC3-209ENST00000438055 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
TTC3-209ENST00000438055 K7ERS5 55 aa8.81□□□□□ -1
TTC3-209ENST00000438055 APOBP04114 4563 aaKnown RBP8.8□□□□□ -1
TTC3-209ENST00000438055 LRP1Q07954 4544 aaKnown RBP8.75□□□□□ -1.01
TTC3-209ENST00000438055 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
TTC3-209ENST00000438055 A0A0D9SG42 100 aa8.73□□□□□ -1.01
TTC3-209ENST00000438055 MYCBP2O75592 4640 aa8.72□□□□□ -1.01
TTC3-209ENST00000438055 KMT2CQ8NEZ4 4911 aaKnown RBP8.71□□□□□ -1.02
TTC3-209ENST00000438055 RPL37P61927 97 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms